RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-222ENST00000531967 IGKV1D-13A0A0B4J2D9 117 aa4.2□□□□□ -1.74
ECHDC1-222ENST00000531967 IQCMA0A1B0GVH7 501 aa4.2□□□□□ -1.74
ECHDC1-222ENST00000531967 A0A1W2PRE2 83 aa4.2□□□□□ -1.74
ECHDC1-222ENST00000531967 RBFOX3A6NFN3 312 aa4.2□□□□□ -1.74
ECHDC1-222ENST00000531967 C1orf196B1AJZ1 125 aa4.2□□□□□ -1.74
ECHDC1-222ENST00000531967 FAAHO00519 579 aa4.2□□□□□ -1.74
ECHDC1-222ENST00000531967 COPEO14579 308 aa4.2□□□□□ -1.74
ECHDC1-222ENST00000531967 EDF1O60869 148 aaKnown RBP4.2□□□□□ -1.74
ECHDC1-222ENST00000531967 REM1O75628 298 aa4.2□□□□□ -1.74
ECHDC1-222ENST00000531967 IFNA7P01567 189 aa4.2□□□□□ -1.74
ECHDC1-222ENST00000531967 EIF4EP06730 217 aaKnown RBP4.2□□□□□ -1.74
ECHDC1-222ENST00000531967 IGKV1-13P0DP09 117 aa4.2□□□□□ -1.74
ECHDC1-222ENST00000531967 FOLR2P14207 255 aa4.2□□□□□ -1.74
ECHDC1-222ENST00000531967 CTRLP40313 264 aa4.2□□□□□ -1.74
ECHDC1-222ENST00000531967 KIR2DS2P43631 304 aa4.2□□□□□ -1.74
ECHDC1-222ENST00000531967 RPL29P47914 159 aaKnown RBP4.2□□□□□ -1.74
ECHDC1-222ENST00000531967 RAB5CP51148 216 aa4.2□□□□□ -1.74
ECHDC1-222ENST00000531967 AQP4P55087 323 aa4.2□□□□□ -1.74
ECHDC1-222ENST00000531967 MTPNP58546 118 aa4.2□□□□□ -1.74
ECHDC1-222ENST00000531967 HSPE1P61604 102 aaKnown RBP4.2□□□□□ -1.74
ECHDC1-222ENST00000531967 IHHQ14623 411 aa4.2□□□□□ -1.74
ECHDC1-222ENST00000531967 PAGE3Q5JUK9 113 aa4.2□□□□□ -1.74
ECHDC1-222ENST00000531967 CHMP1BQ7LBR1 199 aa4.2□□□□□ -1.74
ECHDC1-222ENST00000531967 OR10G7Q8NGN6 311 aa4.2□□□□□ -1.74
ECHDC1-222ENST00000531967 OR4C6Q8NH72 309 aa4.2□□□□□ -1.74
ECHDC1-222ENST00000531967 GMPPAQ96IJ6 420 aaPredicted RBP4.2□□□□□ -1.74
ECHDC1-222ENST00000531967 RDH12Q96NR8 316 aa4.2□□□□□ -1.74
ECHDC1-222ENST00000531967 ZNF300Q96RE9 604 aaPredicted RBP4.2□□□□□ -1.74
ECHDC1-222ENST00000531967 SULT4A1Q9BR01 284 aa4.2□□□□□ -1.74
ECHDC1-222ENST00000531967 SUCNR1Q9BXA5 334 aa4.2□□□□□ -1.74
ECHDC1-222ENST00000531967 SLC17A9Q9BYT1 436 aa4.2□□□□□ -1.74
ECHDC1-222ENST00000531967 NANOGQ9H9S0 305 aa4.2□□□□□ -1.74
ECHDC1-222ENST00000531967 LHX9Q9NQ69 397 aa4.2□□□□□ -1.74
ECHDC1-222ENST00000531967 CISHQ9NSE2 258 aa4.2□□□□□ -1.74
ECHDC1-222ENST00000531967 TMEM100Q9NV29 134 aa4.2□□□□□ -1.74
ECHDC1-222ENST00000531967 DMAC2Q9NW81 257 aa4.2□□□□□ -1.74
ECHDC1-222ENST00000531967 PCYOX1Q9UHG3 505 aa4.2□□□□□ -1.74
ECHDC1-222ENST00000531967 SHANK3Q9BYB0 1731 aa4.2□□□□□ -1.74
ECHDC1-222ENST00000531967 C20orf202A1L168 122 aa4.19□□□□□ -1.74
ECHDC1-222ENST00000531967 NGFP01138 241 aa4.19□□□□□ -1.74
ECHDC1-222ENST00000531967 TSHBP01222 138 aa4.19□□□□□ -1.74
ECHDC1-222ENST00000531967 PTHP01270 115 aa4.19□□□□□ -1.74
ECHDC1-222ENST00000531967 TTRP02766 147 aa4.19□□□□□ -1.74
ECHDC1-222ENST00000531967 ALPLP05186 524 aa4.19□□□□□ -1.74
ECHDC1-222ENST00000531967 PFN1P07737 140 aaKnown RBP4.19□□□□□ -1.74
ECHDC1-222ENST00000531967 OR5G3P0C626 314 aa4.19□□□□□ -1.74
ECHDC1-222ENST00000531967 MIPP30301 263 aa4.19□□□□□ -1.74
ECHDC1-222ENST00000531967 LGALS7P47929 136 aa4.19□□□□□ -1.74
ECHDC1-222ENST00000531967 RARRES1P49788 294 aa4.19□□□□□ -1.74
ECHDC1-222ENST00000531967 CDK5Q00535 292 aa4.19□□□□□ -1.74
ECHDC1-222ENST00000531967 TMEM255AQ5JRV8 349 aa4.19□□□□□ -1.74
ECHDC1-222ENST00000531967 C6orf52Q5T4I8 152 aa4.19□□□□□ -1.74
ECHDC1-222ENST00000531967 ZNF571Q7Z3V5 609 aaPredicted RBP4.19□□□□□ -1.74
ECHDC1-222ENST00000531967 LRRC28Q86X40 367 aaPredicted RBP4.19□□□□□ -1.74
ECHDC1-222ENST00000531967 SNX29P2Q8IUI4 249 aa4.19□□□□□ -1.74
ECHDC1-222ENST00000531967 ZNF441Q8N8Z8 693 aa4.19□□□□□ -1.74
ECHDC1-222ENST00000531967 ZNF485Q8NCK3 441 aa4.19□□□□□ -1.74
ECHDC1-222ENST00000531967 OR51A2Q8NGJ7 313 aa4.19□□□□□ -1.74
ECHDC1-222ENST00000531967 OR10G8Q8NGN5 311 aa4.19□□□□□ -1.74
ECHDC1-222ENST00000531967 ZNRF2Q8NHG8 242 aa4.19□□□□□ -1.74
ECHDC1-222ENST00000531967 TERB2Q8NHR7 220 aa4.19□□□□□ -1.74
ECHDC1-222ENST00000531967 C1orf54Q8WWF1 131 aa4.19□□□□□ -1.74
ECHDC1-222ENST00000531967 BORCS7Q96B45 105 aa4.19□□□□□ -1.74
ECHDC1-222ENST00000531967 ZNF354BQ96LW1 612 aa4.19□□□□□ -1.74
ECHDC1-222ENST00000531967 PITPNM3Q9BZ71 974 aa4.19□□□□□ -1.74
ECHDC1-222ENST00000531967 DEPPQ9NTK1 212 aa4.19□□□□□ -1.74
ECHDC1-222ENST00000531967 TAAR2Q9P1P5 351 aa4.19□□□□□ -1.74
ECHDC1-222ENST00000531967 VSIG4Q9Y279 399 aa4.19□□□□□ -1.74
ECHDC1-222ENST00000531967 KCNE3Q9Y6H6 103 aa4.19□□□□□ -1.74
ECHDC1-222ENST00000531967 RIC1Q4ADV7 1423 aa4.19□□□□□ -1.74
ECHDC1-222ENST00000531967 IGLV1-36A0A0B4J1U3 117 aa4.19□□□□□ -1.74
ECHDC1-222ENST00000531967 EEF1E1-BLOC1S5C9J1V9 151 aa4.19□□□□□ -1.74
ECHDC1-222ENST00000531967 HMGB3O15347 200 aaKnown RBP4.19□□□□□ -1.74
ECHDC1-222ENST00000531967 EEF1E1O43324 174 aaKnown RBP4.19□□□□□ -1.74
ECHDC1-222ENST00000531967 YIF1AO95070 293 aa4.19□□□□□ -1.74
ECHDC1-222ENST00000531967 TSPAN19P0C672 248 aa4.19□□□□□ -1.74
ECHDC1-222ENST00000531967 CXCL2P19875 107 aa4.19□□□□□ -1.74
ECHDC1-222ENST00000531967 PLA2G5P39877 138 aa4.19□□□□□ -1.74
ECHDC1-222ENST00000531967 TMBIM6P55061 237 aa4.19□□□□□ -1.74
ECHDC1-222ENST00000531967 RRAS2P62070 204 aaPredicted RBP4.19□□□□□ -1.74
ECHDC1-222ENST00000531967 HBG1P69891 147 aa4.19□□□□□ -1.74
ECHDC1-222ENST00000531967 HBG2P69892 147 aa4.19□□□□□ -1.74
ECHDC1-222ENST00000531967 IFITM3Q01628 133 aa4.19□□□□□ -1.74
ECHDC1-222ENST00000531967 QPRTQ15274 297 aa4.19□□□□□ -1.74
ECHDC1-222ENST00000531967 TEX261Q6UWH6 196 aa4.19□□□□□ -1.74
ECHDC1-222ENST00000531967 IGFL2Q6UWQ7 119 aa4.19□□□□□ -1.74
ECHDC1-222ENST00000531967 OSR2Q8N2R0 312 aa4.19□□□□□ -1.74
ECHDC1-222ENST00000531967 CHST4Q8NCG5 386 aa4.19□□□□□ -1.74
ECHDC1-222ENST00000531967 ACOT12Q8WYK0 555 aa4.19□□□□□ -1.74
ECHDC1-222ENST00000531967 FMC1Q96HJ9 113 aa4.19□□□□□ -1.74
ECHDC1-222ENST00000531967 C18orf12Q96KH6 178 aa4.19□□□□□ -1.74
ECHDC1-222ENST00000531967 C9orf85Q96MD7 179 aa4.19□□□□□ -1.74
ECHDC1-222ENST00000531967 OR52B2Q96RD2 323 aa4.19□□□□□ -1.74
ECHDC1-222ENST00000531967 SRXN1Q9BYN0 137 aa4.19□□□□□ -1.74
ECHDC1-222ENST00000531967 TBL1XR1Q9BZK7 514 aa4.19□□□□□ -1.74
ECHDC1-222ENST00000531967 NKX6-2Q9C056 277 aaPredicted RBP4.19□□□□□ -1.74
ECHDC1-222ENST00000531967 ORC6Q9Y5N6 252 aa4.19□□□□□ -1.74
ECHDC1-222ENST00000531967 ZNF780BQ9Y6R6 833 aa4.19□□□□□ -1.74
ECHDC1-222ENST00000531967 U3KQ87 197 aa4.19□□□□□ -1.74
ECHDC1-222ENST00000531967 V9GY05 133 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms