RNA–Protein interactions for RNA: ENST00000531842.1

USF1-210, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-210ENST00000531842 KCTD7Q96MP8 289 aa6.94□□□□□ -1.3
USF1-210ENST00000531842 RDH12Q96NR8 316 aa6.94□□□□□ -1.3
USF1-210ENST00000531842 PDCD1LG2Q9BQ51 273 aa6.94□□□□□ -1.3
USF1-210ENST00000531842 FAM110AQ9BQ89 295 aa6.94□□□□□ -1.3
USF1-210ENST00000531842 FAM192AQ9GZU8 254 aa6.94□□□□□ -1.3
USF1-210ENST00000531842 ABCG5Q9H222 651 aa6.94□□□□□ -1.3
USF1-210ENST00000531842 FGF20Q9NP95 211 aaPredicted RBP6.94□□□□□ -1.3
USF1-210ENST00000531842 CALYQ9NYX4 217 aa6.94□□□□□ -1.3
USF1-210ENST00000531842 IDI2-AS1Q9NZ38 188 aa6.94□□□□□ -1.3
USF1-210ENST00000531842 CLEC2DQ9UHP7 191 aa6.94□□□□□ -1.3
USF1-210ENST00000531842 DHDHQ9UQ10 334 aa6.94□□□□□ -1.3
USF1-210ENST00000531842 IGHV3-43A0A0B4J1X8 118 aa6.93□□□□□ -1.3
USF1-210ENST00000531842 IGHV1-3A0A0C4DH29 117 aa6.93□□□□□ -1.3
USF1-210ENST00000531842 I3L521 148 aa6.93□□□□□ -1.3
USF1-210ENST00000531842 OVOL1O14753 267 aa6.93□□□□□ -1.3
USF1-210ENST00000531842 SULT1B1O43704 296 aa6.93□□□□□ -1.3
USF1-210ENST00000531842 IGHG4P01861 327 aa6.93□□□□□ -1.3
USF1-210ENST00000531842 RPSAP08865 295 aaKnown RBP6.93□□□□□ -1.3
USF1-210ENST00000531842 IGHV3-43DP0DP04 118 aa6.93□□□□□ -1.3
USF1-210ENST00000531842 SLC2A2P11168 524 aaPredicted RBP6.93□□□□□ -1.3
USF1-210ENST00000531842 MYF6P23409 242 aa6.93□□□□□ -1.3
USF1-210ENST00000531842 PSMB8P28062 276 aa6.93□□□□□ -1.3
USF1-210ENST00000531842 MTNR1BP49286 362 aa6.93□□□□□ -1.3
USF1-210ENST00000531842 RAB7AP51149 207 aa6.93□□□□□ -1.3
USF1-210ENST00000531842 GABPB1Q06547 395 aaPredicted RBP6.93□□□□□ -1.3
USF1-210ENST00000531842 CDK5R1Q15078 307 aa6.93□□□□□ -1.3
USF1-210ENST00000531842 RSU1Q15404 277 aa6.93□□□□□ -1.3
USF1-210ENST00000531842 FAM27D1Q5T7N8 215 aa6.93□□□□□ -1.3
USF1-210ENST00000531842 OR2G6Q5TZ20 316 aa6.93□□□□□ -1.3
USF1-210ENST00000531842 ZNF529Q6P280 563 aa6.93□□□□□ -1.3
USF1-210ENST00000531842 Q8N1Y9 231 aa6.93□□□□□ -1.3
USF1-210ENST00000531842 PACRGLQ8N7B6 248 aa6.93□□□□□ -1.3
USF1-210ENST00000531842 OR51T1Q8NGJ9 327 aa6.93□□□□□ -1.3
USF1-210ENST00000531842 HAVCR2Q8TDQ0 301 aa6.93□□□□□ -1.3
USF1-210ENST00000531842 MRGPRDQ8TDS7 321 aa6.93□□□□□ -1.3
USF1-210ENST00000531842 TNFAIP8L1Q8WVP5 186 aa6.93□□□□□ -1.3
USF1-210ENST00000531842 ARPC1AQ92747 370 aa6.93□□□□□ -1.3
USF1-210ENST00000531842 GGHQ92820 318 aa6.93□□□□□ -1.3
USF1-210ENST00000531842 CPNE2Q96FN4 548 aaPredicted RBP6.93□□□□□ -1.3
USF1-210ENST00000531842 CYYR1Q96J86 154 aa6.93□□□□□ -1.3
USF1-210ENST00000531842 MAGEA13PA6NCF6 341 aa6.92□□□□□ -1.3
USF1-210ENST00000531842 RBMY1BA6NDE4 496 aaKnown RBP6.92□□□□□ -1.3
USF1-210ENST00000531842 RBMY1EA6NEQ0 496 aaKnown RBP6.92□□□□□ -1.3
USF1-210ENST00000531842 HSD17B6O14756 317 aa6.92□□□□□ -1.3
USF1-210ENST00000531842 SLC31A2O15432 143 aa6.92□□□□□ -1.3
USF1-210ENST00000531842 MPZL2O60487 215 aa6.92□□□□□ -1.3
USF1-210ENST00000531842 IL1AP01583 271 aa6.92□□□□□ -1.3
USF1-210ENST00000531842 ELANEP08246 267 aa6.92□□□□□ -1.3
USF1-210ENST00000531842 RBMY1DP0C7P1 496 aaKnown RBP6.92□□□□□ -1.3
USF1-210ENST00000531842 SNRPBP14678 240 aaKnown RBP6.92□□□□□ -1.3
USF1-210ENST00000531842 RAB3AP20336 220 aa6.92□□□□□ -1.3
USF1-210ENST00000531842 CNTFRP26992 372 aa6.92□□□□□ -1.3
USF1-210ENST00000531842 GBX2P52951 348 aaPredicted RBP6.92□□□□□ -1.3
USF1-210ENST00000531842 ZP1P60852 638 aa6.92□□□□□ -1.3
USF1-210ENST00000531842 RPS11P62280 158 aaKnown RBP eCLIP6.92□□□□□ -1.3
USF1-210ENST00000531842 ZNF616Q08AN1 781 aa6.92□□□□□ -1.3
USF1-210ENST00000531842 TGIF2LXQ8IUE1 241 aa6.92□□□□□ -1.3
USF1-210ENST00000531842 ZNF491Q8N8L2 437 aa6.92□□□□□ -1.3
USF1-210ENST00000531842 OR10K1Q8NGX5 313 aa6.92□□□□□ -1.3
USF1-210ENST00000531842 OR5AK2Q8NH90 309 aa6.92□□□□□ -1.3
USF1-210ENST00000531842 MYOZ3Q8TDC0 251 aa6.92□□□□□ -1.3
USF1-210ENST00000531842 CYGBQ8WWM9 190 aa6.92□□□□□ -1.3
USF1-210ENST00000531842 ORAI1Q96D31 301 aa6.92□□□□□ -1.3
USF1-210ENST00000531842 RITA1Q96K30 269 aa6.92□□□□□ -1.3
USF1-210ENST00000531842 S1PR3Q99500 378 aa6.92□□□□□ -1.3
USF1-210ENST00000531842 ING4Q9UNL4 249 aa6.92□□□□□ -1.3
USF1-210ENST00000531842 RPL36Q9Y3U8 105 aaKnown RBP6.92□□□□□ -1.3
USF1-210ENST00000531842 RYR1P21817 5038 aa6.92□□□□□ -1.3
USF1-210ENST00000531842 DNAH10Q8IVF4 4471 aa6.91□□□□□ -1.3
USF1-210ENST00000531842 IGHV4OR15-8A0A075B7B6 117 aa6.91□□□□□ -1.3
USF1-210ENST00000531842 A0A087WW49 117 aa6.91□□□□□ -1.3
USF1-210ENST00000531842 TRAV24A0A0B4J272 114 aa6.91□□□□□ -1.3
USF1-210ENST00000531842 TMEM212A6NML5 194 aa6.91□□□□□ -1.3
USF1-210ENST00000531842 LDLRAD4O15165 306 aa6.91□□□□□ -1.3
USF1-210ENST00000531842 OR7C1O76099 320 aaPredicted RBP6.91□□□□□ -1.3
USF1-210ENST00000531842 HTR3BO95264 441 aa6.91□□□□□ -1.3
USF1-210ENST00000531842 FADS2O95864 444 aaKnown RBP6.91□□□□□ -1.3
USF1-210ENST00000531842 GAPDHP04406 335 aaKnown RBP6.91□□□□□ -1.3
USF1-210ENST00000531842 OR8U8P0C7N1 319 aa6.91□□□□□ -1.3
USF1-210ENST00000531842 VDAC1P21796 283 aa6.91□□□□□ -1.3
USF1-210ENST00000531842 SOX2P48431 317 aa6.91□□□□□ -1.3
USF1-210ENST00000531842 KCNJ3P48549 501 aa6.91□□□□□ -1.3
USF1-210ENST00000531842 EBI3Q14213 229 aa6.91□□□□□ -1.3
USF1-210ENST00000531842 HAGHQ16775 308 aa6.91□□□□□ -1.3
USF1-210ENST00000531842 PIGYQ3MUY2 71 aa6.91□□□□□ -1.3
USF1-210ENST00000531842 ELP2Q6IA86 826 aa6.91□□□□□ -1.3
USF1-210ENST00000531842 C5orf24Q7Z6I8 188 aa6.91□□□□□ -1.3
USF1-210ENST00000531842 ZNF429Q86V71 674 aa6.91□□□□□ -1.3
USF1-210ENST00000531842 OR8H3Q8N146 312 aa6.91□□□□□ -1.3
USF1-210ENST00000531842 DHRSXQ8N5I4 330 aa6.91□□□□□ -1.3
USF1-210ENST00000531842 PARP16Q8N5Y8 322 aa6.91□□□□□ -1.3
USF1-210ENST00000531842 TMEM104Q8NE00 496 aa6.91□□□□□ -1.3
USF1-210ENST00000531842 ZNF555Q8NEP9 628 aa6.91□□□□□ -1.3
USF1-210ENST00000531842 PXT1Q8NFP0 134 aa6.91□□□□□ -1.3
USF1-210ENST00000531842 OR51A2Q8NGJ7 313 aa6.91□□□□□ -1.3
USF1-210ENST00000531842 OR13C5Q8NGS8 318 aa6.91□□□□□ -1.3
USF1-210ENST00000531842 Q96MT0 163 aa6.91□□□□□ -1.3
USF1-210ENST00000531842 S100A13Q99584 98 aa6.91□□□□□ -1.3
USF1-210ENST00000531842 DPCDQ9BVM2 203 aaPredicted RBP6.91□□□□□ -1.3
USF1-210ENST00000531842 NCOR1P1Q9H4R4 102 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms