RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 WIPI2Q9Y4P8 454 aa4.71□□□□□ -1.66
PCF11-205ENST00000530906 TTC28Q96AY4 2481 aa4.71□□□□□ -1.66
PCF11-205ENST00000530906 IGHV2OR16-5A0A0B4J2B6 119 aa4.7□□□□□ -1.66
PCF11-205ENST00000530906 A0A1B0GU03 582 aa4.7□□□□□ -1.66
PCF11-205ENST00000530906 TMEM30CPA0ZSE6 113 aa4.7□□□□□ -1.66
PCF11-205ENST00000530906 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.7□□□□□ -1.66
PCF11-205ENST00000530906 BET1O15155 118 aa4.7□□□□□ -1.66
PCF11-205ENST00000530906 PHF1O43189 567 aaPredicted RBP4.7□□□□□ -1.66
PCF11-205ENST00000530906 GPR137BO60478 399 aa4.7□□□□□ -1.66
PCF11-205ENST00000530906 LYZL6O75951 148 aa4.7□□□□□ -1.66
PCF11-205ENST00000530906 SCAF4O95104 1147 aaKnown RBP4.7□□□□□ -1.66
PCF11-205ENST00000530906 LY86O95711 162 aa4.7□□□□□ -1.66
PCF11-205ENST00000530906 MBPP02686 304 aaPredicted RBP4.7□□□□□ -1.66
PCF11-205ENST00000530906 SEC11BP0C7V7 166 aa4.7□□□□□ -1.66
PCF11-205ENST00000530906 CECR9P0C854 216 aa4.7□□□□□ -1.66
PCF11-205ENST00000530906 HKR1P10072 659 aa4.7□□□□□ -1.66
PCF11-205ENST00000530906 ZNF44P15621 663 aa4.7□□□□□ -1.66
PCF11-205ENST00000530906 WT1P19544 449 aaPredicted RBP4.7□□□□□ -1.66
PCF11-205ENST00000530906 F2RP25116 425 aa4.7□□□□□ -1.66
PCF11-205ENST00000530906 GNRHRP30968 328 aa4.7□□□□□ -1.66
PCF11-205ENST00000530906 FXYD4P59646 89 aa4.7□□□□□ -1.66
PCF11-205ENST00000530906 BAXQ07812 192 aa4.7□□□□□ -1.66
PCF11-205ENST00000530906 PSG7Q13046 419 aa4.7□□□□□ -1.66
PCF11-205ENST00000530906 ZNF266Q14584 549 aa4.7□□□□□ -1.66
PCF11-205ENST00000530906 HMGN3Q15651 99 aa4.7□□□□□ -1.66
PCF11-205ENST00000530906 TMEM30BQ3MIR4 351 aa4.7□□□□□ -1.66
PCF11-205ENST00000530906 PHLDA2Q53GA4 152 aa4.7□□□□□ -1.66
PCF11-205ENST00000530906 IGSF11Q5DX21 431 aa4.7□□□□□ -1.66
PCF11-205ENST00000530906 C1orf185Q5T7R7 199 aa4.7□□□□□ -1.66
PCF11-205ENST00000530906 ZNF324BQ6AW86 544 aaPredicted RBP4.7□□□□□ -1.66
PCF11-205ENST00000530906 SLC35E4Q6ICL7 350 aa4.7□□□□□ -1.66
PCF11-205ENST00000530906 KRTAP5-3Q6L8H2 238 aa4.7□□□□□ -1.66
PCF11-205ENST00000530906 PCSK4Q6UW60 755 aa4.7□□□□□ -1.66
PCF11-205ENST00000530906 FAM180AQ6UWF9 173 aa4.7□□□□□ -1.66
PCF11-205ENST00000530906 BHLHA15Q7RTS1 189 aaPredicted RBP4.7□□□□□ -1.66
PCF11-205ENST00000530906 ZNF695Q8IW36 515 aa4.7□□□□□ -1.66
PCF11-205ENST00000530906 GCNT2Q8N0V5 402 aa4.7□□□□□ -1.66
PCF11-205ENST00000530906 SPAG16Q8N0X2 631 aa4.7□□□□□ -1.66
PCF11-205ENST00000530906 OR4D5Q8NGN0 318 aa4.7□□□□□ -1.66
PCF11-205ENST00000530906 PPP1R35Q8TAP8 253 aa4.7□□□□□ -1.66
PCF11-205ENST00000530906 SUN5Q8TC36 379 aa4.7□□□□□ -1.66
PCF11-205ENST00000530906 LSM10Q969L4 123 aaKnown RBP4.7□□□□□ -1.66
PCF11-205ENST00000530906 MRPL24Q96A35 216 aaKnown RBP4.7□□□□□ -1.66
PCF11-205ENST00000530906 STARD4Q96DR4 205 aa4.7□□□□□ -1.66
PCF11-205ENST00000530906 RRNAD1Q96FB5 475 aaKnown RBP4.7□□□□□ -1.66
PCF11-205ENST00000530906 SMIM8Q96KF7 97 aa4.7□□□□□ -1.66
PCF11-205ENST00000530906 SPATA25Q9BR10 227 aa4.7□□□□□ -1.66
PCF11-205ENST00000530906 ARV1Q9H2C2 271 aa4.7□□□□□ -1.66
PCF11-205ENST00000530906 TMPRSS5Q9H3S3 457 aa4.7□□□□□ -1.66
PCF11-205ENST00000530906 TAF9BQ9HBM6 251 aa4.7□□□□□ -1.66
PCF11-205ENST00000530906 BARX1Q9HBU1 254 aaPredicted RBP4.7□□□□□ -1.66
PCF11-205ENST00000530906 MMP26Q9NRE1 261 aa4.7□□□□□ -1.66
PCF11-205ENST00000530906 CYTL1Q9NRR1 136 aa4.7□□□□□ -1.66
PCF11-205ENST00000530906 LIN7CQ9NUP9 197 aaKnown RBP4.7□□□□□ -1.66
PCF11-205ENST00000530906 TAS2R3Q9NYW6 316 aa4.7□□□□□ -1.66
PCF11-205ENST00000530906 OR5AC2Q9NZP5 309 aa4.7□□□□□ -1.66
PCF11-205ENST00000530906 DKK4Q9UBT3 224 aa4.7□□□□□ -1.66
PCF11-205ENST00000530906 LPAR3Q9UBY5 353 aa4.7□□□□□ -1.66
PCF11-205ENST00000530906 CACFD1Q9UGQ2 172 aa4.7□□□□□ -1.66
PCF11-205ENST00000530906 STRAPQ9Y3F4 350 aaKnown RBP4.7□□□□□ -1.66
PCF11-205ENST00000530906 OOEPA6NGQ2 149 aa4.69□□□□□ -1.66
PCF11-205ENST00000530906 MPTX1A8MV57 137 aa4.69□□□□□ -1.66
PCF11-205ENST00000530906 UMAD1C9J7I0 102 aa4.69□□□□□ -1.66
PCF11-205ENST00000530906 FAM90A26D6RGX4 464 aa4.69□□□□□ -1.66
PCF11-205ENST00000530906 TRIM77I1YAP6 450 aa4.69□□□□□ -1.66
PCF11-205ENST00000530906 SLC33A1O00400 549 aaPredicted RBP4.69□□□□□ -1.66
PCF11-205ENST00000530906 TIMM8AO60220 97 aaPredicted RBP4.69□□□□□ -1.66
PCF11-205ENST00000530906 OR2H2O95918 312 aa4.69□□□□□ -1.66
PCF11-205ENST00000530906 HAND1O96004 215 aa4.69□□□□□ -1.66
PCF11-205ENST00000530906 IGHV3-13P01766 116 aa4.69□□□□□ -1.66
PCF11-205ENST00000530906 CRYAAP02489 173 aa4.69□□□□□ -1.66
PCF11-205ENST00000530906 SERPINE2P07093 398 aa4.69□□□□□ -1.66
PCF11-205ENST00000530906 SCTP09683 121 aa4.69□□□□□ -1.66
PCF11-205ENST00000530906 ZNF250P15622 560 aa4.69□□□□□ -1.66
PCF11-205ENST00000530906 CEACAM8P31997 349 aaPredicted RBP4.69□□□□□ -1.66
PCF11-205ENST00000530906 GLRXP35754 106 aa4.69□□□□□ -1.66
PCF11-205ENST00000530906 NKX2-1P43699 371 aaPredicted RBP4.69□□□□□ -1.66
PCF11-205ENST00000530906 SULT1A2P50226 295 aa4.69□□□□□ -1.66
PCF11-205ENST00000530906 F2RL1P55085 397 aa4.69□□□□□ -1.66
PCF11-205ENST00000530906 SELENOVP59797 346 aa4.69□□□□□ -1.66
PCF11-205ENST00000530906 HERPUD1Q15011 391 aa4.69□□□□□ -1.66
PCF11-205ENST00000530906 IGFBP7Q16270 282 aa4.69□□□□□ -1.66
PCF11-205ENST00000530906 ANKRD39Q53RE8 183 aa4.69□□□□□ -1.66
PCF11-205ENST00000530906 NMSQ5H8A3 153 aa4.69□□□□□ -1.66
PCF11-205ENST00000530906 TMEM268Q5VZI3 342 aa4.69□□□□□ -1.66
PCF11-205ENST00000530906 VWA1Q6PCB0 445 aa4.69□□□□□ -1.66
PCF11-205ENST00000530906 Q6ZPA2 131 aa4.69□□□□□ -1.66
PCF11-205ENST00000530906 LYZL2Q7Z4W2 148 aa4.69□□□□□ -1.66
PCF11-205ENST00000530906 TBC1D26Q86UD7 250 aa4.69□□□□□ -1.66
PCF11-205ENST00000530906 CXorf67Q86X51 503 aaPredicted RBP4.69□□□□□ -1.66
PCF11-205ENST00000530906 FAM219AQ8IW50 185 aa4.69□□□□□ -1.66
PCF11-205ENST00000530906 SLC35G3Q8N808 338 aa4.69□□□□□ -1.66
PCF11-205ENST00000530906 NAXEQ8NCW5 288 aa4.69□□□□□ -1.66
PCF11-205ENST00000530906 OR10V1Q8NGI7 309 aa4.69□□□□□ -1.66
PCF11-205ENST00000530906 FAM57AQ8TBR7 257 aa4.69□□□□□ -1.66
PCF11-205ENST00000530906 SECTM1Q8WVN6 248 aa4.69□□□□□ -1.66
PCF11-205ENST00000530906 DYRK2Q92630 601 aa4.69□□□□□ -1.66
PCF11-205ENST00000530906 RDH5Q92781 318 aa4.69□□□□□ -1.66
PCF11-205ENST00000530906 ERGIC1Q969X5 290 aa4.69□□□□□ -1.66
PCF11-205ENST00000530906 MUCL1Q96DR8 90 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms