RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 IP6K3Q96PC2 410 aa10.66□□□□□ -0.7
SCN3B-206ENST00000530277 SF3B5Q9BWJ5 86 aaKnown RBP10.66□□□□□ -0.7
SCN3B-206ENST00000530277 TAAR3PQ9P1P4 343 aa10.66□□□□□ -0.7
SCN3B-206ENST00000530277 OR1A1Q9P1Q5 309 aa10.66□□□□□ -0.7
SCN3B-206ENST00000530277 PINLYPA6NC86 204 aa10.66□□□□□ -0.7
SCN3B-206ENST00000530277 PSMB3P49720 205 aa10.66□□□□□ -0.7
SCN3B-206ENST00000530277 TAS2R30P59541 319 aa10.66□□□□□ -0.7
SCN3B-206ENST00000530277 ZNF441Q8N8Z8 693 aa10.66□□□□□ -0.7
SCN3B-206ENST00000530277 POM121Q96HA1 1249 aa10.66□□□□□ -0.7
SCN3B-206ENST00000530277 SLC35B3Q9H1N7 401 aa10.66□□□□□ -0.7
SCN3B-206ENST00000530277 NDRG3Q9UGV2 375 aa10.66□□□□□ -0.7
SCN3B-206ENST00000530277 IGF2RP11717 2491 aa10.66□□□□□ -0.7
SCN3B-206ENST00000530277 RNF212BA8MTL3 300 aa10.66□□□□□ -0.7
SCN3B-206ENST00000530277 VSTM5A8MXK1 200 aa10.66□□□□□ -0.7
SCN3B-206ENST00000530277 TOX4O94842 621 aa10.66□□□□□ -0.7
SCN3B-206ENST00000530277 PRF1P14222 555 aa10.66□□□□□ -0.7
SCN3B-206ENST00000530277 HFEQ30201 348 aa10.66□□□□□ -0.7
SCN3B-206ENST00000530277 ZNF880Q6PDB4 577 aa10.66□□□□□ -0.7
SCN3B-206ENST00000530277 UBAC2Q8NBM4 344 aa10.66□□□□□ -0.7
SCN3B-206ENST00000530277 LRRC29Q8WV35 223 aa10.66□□□□□ -0.7
SCN3B-206ENST00000530277 LURAP1Q96LR2 239 aa10.66□□□□□ -0.7
SCN3B-206ENST00000530277 CLN8Q9UBY8 286 aa10.66□□□□□ -0.7
SCN3B-206ENST00000530277 HSF4Q9ULV5 492 aa10.66□□□□□ -0.7
SCN3B-206ENST00000530277 ST8SIA5O15466 376 aa10.65□□□□□ -0.7
SCN3B-206ENST00000530277 KLF7O75840 302 aaPredicted RBP10.65□□□□□ -0.7
SCN3B-206ENST00000530277 FGF2P09038 288 aa10.65□□□□□ -0.7
SCN3B-206ENST00000530277 MGST1P10620 155 aaKnown RBP10.65□□□□□ -0.7
SCN3B-206ENST00000530277 VDAC1P21796 283 aa10.65□□□□□ -0.7
SCN3B-206ENST00000530277 CPEB3Q8NE35 698 aaKnown RBP10.65□□□□□ -0.7
SCN3B-206ENST00000530277 LEAP2Q969E1 77 aa10.65□□□□□ -0.7
SCN3B-206ENST00000530277 TMEM230Q96A57 120 aa10.65□□□□□ -0.7
SCN3B-206ENST00000530277 PROCRQ9UNN8 238 aa10.65□□□□□ -0.7
SCN3B-206ENST00000530277 STRAPQ9Y3F4 350 aaKnown RBP10.65□□□□□ -0.7
SCN3B-206ENST00000530277 NPTNQ9Y639 398 aa10.65□□□□□ -0.7
SCN3B-206ENST00000530277 NCOR2Q9Y618 2525 aa10.65□□□□□ -0.7
SCN3B-206ENST00000530277 SLC25A6P12236 298 aa10.65□□□□□ -0.7
SCN3B-206ENST00000530277 CHRNA7P36544 502 aa10.65□□□□□ -0.7
SCN3B-206ENST00000530277 PMELP40967 661 aa10.65□□□□□ -0.7
SCN3B-206ENST00000530277 RAB31Q13636 194 aa10.65□□□□□ -0.7
SCN3B-206ENST00000530277 ZNF345Q14585 488 aa10.65□□□□□ -0.7
SCN3B-206ENST00000530277 DHRS11Q6UWP2 260 aa10.65□□□□□ -0.7
SCN3B-206ENST00000530277 BSCL2Q96G97 398 aaPredicted RBP10.65□□□□□ -0.7
SCN3B-206ENST00000530277 MARS2Q96GW9 593 aaKnown RBP10.65□□□□□ -0.7
SCN3B-206ENST00000530277 MEGF10Q96KG7 1140 aa10.65□□□□□ -0.7
SCN3B-206ENST00000530277 LIN7CQ9NUP9 197 aaKnown RBP10.65□□□□□ -0.7
SCN3B-206ENST00000530277 TRDCB7Z8K6 153 aa10.65□□□□□ -0.71
SCN3B-206ENST00000530277 OR8U8P0C7N1 319 aa10.65□□□□□ -0.71
SCN3B-206ENST00000530277 RNF224P0DH78 156 aa10.65□□□□□ -0.71
SCN3B-206ENST00000530277 MRPL14Q6P1L8 145 aaKnown RBP10.65□□□□□ -0.71
SCN3B-206ENST00000530277 LYG1Q8N1E2 194 aa10.65□□□□□ -0.71
SCN3B-206ENST00000530277 ZADH2Q8N4Q0 377 aa10.65□□□□□ -0.71
SCN3B-206ENST00000530277 ASB13Q8WXK3 278 aa10.65□□□□□ -0.71
SCN3B-206ENST00000530277 ABHD14AQ9BUJ0 271 aa10.65□□□□□ -0.71
SCN3B-206ENST00000530277 RNF126Q9BV68 326 aa10.65□□□□□ -0.71
SCN3B-206ENST00000530277 SLC2A8Q9NY64 477 aa10.65□□□□□ -0.71
SCN3B-206ENST00000530277 ACACBO00763 2458 aa10.64□□□□□ -0.71
SCN3B-206ENST00000530277 WNT9BO14905 357 aa10.64□□□□□ -0.71
SCN3B-206ENST00000530277 IFI6P09912 130 aa10.64□□□□□ -0.71
SCN3B-206ENST00000530277 UQCC3Q6UW78 93 aa10.64□□□□□ -0.71
SCN3B-206ENST00000530277 TMEM252Q8N6L7 170 aa10.64□□□□□ -0.71
SCN3B-206ENST00000530277 TLN1Q9Y490 2541 aaKnown RBP10.64□□□□□ -0.71
SCN3B-206ENST00000530277 H0YL77 283 aa10.64□□□□□ -0.71
SCN3B-206ENST00000530277 SP1P08047 785 aa10.64□□□□□ -0.71
SCN3B-206ENST00000530277 SLC38A11Q08AI6 406 aa10.64□□□□□ -0.71
SCN3B-206ENST00000530277 ZNF818PQ6ZRF7 136 aa10.64□□□□□ -0.71
SCN3B-206ENST00000530277 LFNGQ8NES3 379 aa10.64□□□□□ -0.71
SCN3B-206ENST00000530277 OR52L2PQ8NGH6 319 aa10.64□□□□□ -0.71
SCN3B-206ENST00000530277 SARAFQ96BY9 339 aa10.64□□□□□ -0.71
SCN3B-206ENST00000530277 IMMP1LQ96LU5 166 aa10.64□□□□□ -0.71
SCN3B-206ENST00000530277 HIPK2Q9H2X6 1198 aa10.64□□□□□ -0.71
SCN3B-206ENST00000530277 RIMS4Q9H426 269 aaPredicted RBP10.64□□□□□ -0.71
SCN3B-206ENST00000530277 RBFOX3A6NFN3 312 aa10.64□□□□□ -0.71
SCN3B-206ENST00000530277 SYNGR2O43760 224 aa10.64□□□□□ -0.71
SCN3B-206ENST00000530277 MELTFP08582 738 aa10.64□□□□□ -0.71
SCN3B-206ENST00000530277 HMGN3Q15651 99 aa10.64□□□□□ -0.71
SCN3B-206ENST00000530277 CYB561D1Q8N8Q1 229 aa10.64□□□□□ -0.71
SCN3B-206ENST00000530277 SSMEM1Q8WWF3 244 aa10.64□□□□□ -0.71
SCN3B-206ENST00000530277 FAM131CQ96AQ9 280 aa10.64□□□□□ -0.71
SCN3B-206ENST00000530277 COL4A3Q01955 1670 aa10.64□□□□□ -0.71
SCN3B-206ENST00000530277 MAP1LC3B2A6NCE7 125 aa10.63□□□□□ -0.71
SCN3B-206ENST00000530277 F8VVB4 439 aa10.63□□□□□ -0.71
SCN3B-206ENST00000530277 F8VWA3 439 aa10.63□□□□□ -0.71
SCN3B-206ENST00000530277 SCGB1D1O95968 90 aa10.63□□□□□ -0.71
SCN3B-206ENST00000530277 IGHMP01871 453 aa10.63□□□□□ -0.71
SCN3B-206ENST00000530277 ANOS1P23352 680 aa10.63□□□□□ -0.71
SCN3B-206ENST00000530277 SULT1A1P50225 295 aa10.63□□□□□ -0.71
SCN3B-206ENST00000530277 OR10D4PQ8NGN7 298 aa10.63□□□□□ -0.71
SCN3B-206ENST00000530277 MAP1LC3BQ9GZQ8 125 aa10.63□□□□□ -0.71
SCN3B-206ENST00000530277 DEDDO75618 318 aa10.63□□□□□ -0.71
SCN3B-206ENST00000530277 CELA3BP08861 270 aa10.63□□□□□ -0.71
SCN3B-206ENST00000530277 TNFSF4P23510 183 aa10.63□□□□□ -0.71
SCN3B-206ENST00000530277 BMPERQ8N8U9 685 aa10.63□□□□□ -0.71
SCN3B-206ENST00000530277 ZNF665Q9H7R5 613 aa10.63□□□□□ -0.71
SCN3B-206ENST00000530277 PHOX2AO14813 284 aa10.63□□□□□ -0.71
SCN3B-206ENST00000530277 OR7C2O60412 319 aa10.63□□□□□ -0.71
SCN3B-206ENST00000530277 YIF1AO95070 293 aa10.63□□□□□ -0.71
SCN3B-206ENST00000530277 FABP4P15090 132 aa10.63□□□□□ -0.71
SCN3B-206ENST00000530277 HOXA4Q00056 320 aaPredicted RBP10.63□□□□□ -0.71
SCN3B-206ENST00000530277 RNPS1Q15287 305 aaKnown RBP10.63□□□□□ -0.71
SCN3B-206ENST00000530277 FFAR4Q5NUL3 377 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms