RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 C19orf12Q9NSK7 152 aa6.54□□□□□ -1.36
SSBP3-211ENST00000528787 IDI2-AS1Q9NZ38 188 aa6.54□□□□□ -1.36
SSBP3-211ENST00000528787 ANXA10Q9UJ72 324 aa6.54□□□□□ -1.36
SSBP3-211ENST00000528787 TBL2Q9Y4P3 447 aaKnown RBP6.54□□□□□ -1.36
SSBP3-211ENST00000528787 ITPR3Q14573 2671 aa6.54□□□□□ -1.36
SSBP3-211ENST00000528787 ABCA1O95477 2261 aa6.53□□□□□ -1.36
SSBP3-211ENST00000528787 A0A087X0M5 115 aa6.53□□□□□ -1.36
SSBP3-211ENST00000528787 A0A1B0GX30 115 aa6.53□□□□□ -1.36
SSBP3-211ENST00000528787 OOSP1A8MZH6 123 aa6.53□□□□□ -1.36
SSBP3-211ENST00000528787 ZNF736B4DX44 427 aaPredicted RBP6.53□□□□□ -1.36
SSBP3-211ENST00000528787 C22orf46C9J442 243 aa6.53□□□□□ -1.36
SSBP3-211ENST00000528787 NPIPB11E5RHQ5 1161 aa6.53□□□□□ -1.36
SSBP3-211ENST00000528787 F2RL2O00254 374 aa6.53□□□□□ -1.36
SSBP3-211ENST00000528787 YPEL1O60688 119 aa6.53□□□□□ -1.36
SSBP3-211ENST00000528787 HBZP02008 142 aa6.53□□□□□ -1.36
SSBP3-211ENST00000528787 ZNF16P17020 682 aaPredicted RBP6.53□□□□□ -1.36
SSBP3-211ENST00000528787 EPHA1P21709 976 aa6.53□□□□□ -1.36
SSBP3-211ENST00000528787 ZFP36P26651 326 aaKnown RBP6.53□□□□□ -1.36
SSBP3-211ENST00000528787 CD34P28906 385 aa6.53□□□□□ -1.36
SSBP3-211ENST00000528787 CD40LGP29965 261 aa6.53□□□□□ -1.36
SSBP3-211ENST00000528787 SRP14P37108 136 aaKnown RBP6.53□□□□□ -1.36
SSBP3-211ENST00000528787 UBE2E1P51965 193 aa6.53□□□□□ -1.36
SSBP3-211ENST00000528787 ARF6P62330 175 aa6.53□□□□□ -1.36
SSBP3-211ENST00000528787 PAX2Q02962 417 aa6.53□□□□□ -1.36
SSBP3-211ENST00000528787 MOGAT2Q3SYC2 334 aa6.53□□□□□ -1.36
SSBP3-211ENST00000528787 MINOS1Q5TGZ0 78 aa6.53□□□□□ -1.36
SSBP3-211ENST00000528787 TRIQKQ629K1 86 aa6.53□□□□□ -1.36
SSBP3-211ENST00000528787 CCDC190Q86UF4 302 aa6.53□□□□□ -1.36
SSBP3-211ENST00000528787 SNX29P2Q8IUI4 249 aa6.53□□□□□ -1.36
SSBP3-211ENST00000528787 Q8N402 240 aa6.53□□□□□ -1.36
SSBP3-211ENST00000528787 BEND2Q8NDZ0 799 aa6.53□□□□□ -1.36
SSBP3-211ENST00000528787 OR2AK2Q8NG84 335 aa6.53□□□□□ -1.36
SSBP3-211ENST00000528787 OR5AP2Q8NGF4 316 aa6.53□□□□□ -1.36
SSBP3-211ENST00000528787 PLPPR1Q8TBJ4 325 aa6.53□□□□□ -1.36
SSBP3-211ENST00000528787 GPX8Q8TED1 209 aa6.53□□□□□ -1.36
SSBP3-211ENST00000528787 IL1F10Q8WWZ1 152 aa6.53□□□□□ -1.36
SSBP3-211ENST00000528787 KIRREL1Q96J84 757 aa6.53□□□□□ -1.36
SSBP3-211ENST00000528787 YPEL2Q96QA6 119 aa6.53□□□□□ -1.36
SSBP3-211ENST00000528787 PCGF1Q9BSM1 259 aa6.53□□□□□ -1.36
SSBP3-211ENST00000528787 CCDC32Q9BV29 185 aa6.53□□□□□ -1.36
SSBP3-211ENST00000528787 TMEM133Q9H2Q1 129 aa6.53□□□□□ -1.36
SSBP3-211ENST00000528787 ZMAT3Q9HA38 289 aaKnown RBP6.53□□□□□ -1.36
SSBP3-211ENST00000528787 YAE1D1Q9NRH1 226 aa6.53□□□□□ -1.36
SSBP3-211ENST00000528787 ING3Q9NXR8 418 aa6.53□□□□□ -1.36
SSBP3-211ENST00000528787 PIPOXQ9P0Z9 390 aa6.53□□□□□ -1.36
SSBP3-211ENST00000528787 MTFP1Q9UDX5 166 aa6.53□□□□□ -1.36
SSBP3-211ENST00000528787 METRNQ9UJH8 293 aa6.53□□□□□ -1.36
SSBP3-211ENST00000528787 FAM96BQ9Y3D0 163 aa6.53□□□□□ -1.36
SSBP3-211ENST00000528787 MINOS1-NBL1R4GNA1 71 aa6.53□□□□□ -1.36
SSBP3-211ENST00000528787 NAP1L6A6NFF2 107 aa6.52□□□□□ -1.37
SSBP3-211ENST00000528787 LEUTXA8MZ59 168 aa6.52□□□□□ -1.37
SSBP3-211ENST00000528787 DISC1C4P0D8 188 aa6.52□□□□□ -1.37
SSBP3-211ENST00000528787 C12orf77C9JDV5 145 aa6.52□□□□□ -1.37
SSBP3-211ENST00000528787 HLA-DQB1P01920 261 aa6.52□□□□□ -1.37
SSBP3-211ENST00000528787 SELLP14151 372 aa6.52□□□□□ -1.37
SSBP3-211ENST00000528787 NAT1P18440 290 aa6.52□□□□□ -1.37
SSBP3-211ENST00000528787 NFYBP25208 207 aa6.52□□□□□ -1.37
SSBP3-211ENST00000528787 HTR1DP28221 377 aa6.52□□□□□ -1.37
SSBP3-211ENST00000528787 TSPAN5P62079 268 aa6.52□□□□□ -1.37
SSBP3-211ENST00000528787 TAGLNQ01995 201 aaKnown RBP6.52□□□□□ -1.37
SSBP3-211ENST00000528787 CBX3Q13185 183 aa6.52□□□□□ -1.37
SSBP3-211ENST00000528787 CDK10Q15131 360 aa6.52□□□□□ -1.37
SSBP3-211ENST00000528787 MSMO1Q15800 293 aa6.52□□□□□ -1.37
SSBP3-211ENST00000528787 RNASE10Q5GAN6 216 aaKnown RBP6.52□□□□□ -1.37
SSBP3-211ENST00000528787 FOXB2Q5VYV0 432 aa6.52□□□□□ -1.37
SSBP3-211ENST00000528787 FAM71F2Q6NXP2 309 aa6.52□□□□□ -1.37
SSBP3-211ENST00000528787 BRICD5Q6PL45 260 aa6.52□□□□□ -1.37
SSBP3-211ENST00000528787 RBMS3Q6XE24 437 aaKnown RBP6.52□□□□□ -1.37
SSBP3-211ENST00000528787 VMO1Q7Z5L0 202 aa6.52□□□□□ -1.37
SSBP3-211ENST00000528787 PRR18Q8N4B5 295 aa6.52□□□□□ -1.37
SSBP3-211ENST00000528787 TOMM5Q8N4H5 51 aa6.52□□□□□ -1.37
SSBP3-211ENST00000528787 ARRDC1Q8N5I2 433 aa6.52□□□□□ -1.37
SSBP3-211ENST00000528787 TMEM229BQ8NBD8 167 aa6.52□□□□□ -1.37
SSBP3-211ENST00000528787 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.52□□□□□ -1.37
SSBP3-211ENST00000528787 OR11H6Q8NGC7 330 aa6.52□□□□□ -1.37
SSBP3-211ENST00000528787 OR13A1Q8NGR1 328 aa6.52□□□□□ -1.37
SSBP3-211ENST00000528787 OR10X1Q8NGY0 326 aa6.52□□□□□ -1.37
SSBP3-211ENST00000528787 CCDC107Q8WV48 283 aa6.52□□□□□ -1.37
SSBP3-211ENST00000528787 DACT3Q96B18 629 aaPredicted RBP6.52□□□□□ -1.37
SSBP3-211ENST00000528787 JMJD8Q96S16 334 aa6.52□□□□□ -1.37
SSBP3-211ENST00000528787 S1PR3Q99500 378 aa6.52□□□□□ -1.37
SSBP3-211ENST00000528787 PRRT1Q99946 306 aa6.52□□□□□ -1.37
SSBP3-211ENST00000528787 C7orf50Q9BRJ6 194 aaKnown RBP6.52□□□□□ -1.37
SSBP3-211ENST00000528787 BEX2Q9BXY8 128 aa6.52□□□□□ -1.37
SSBP3-211ENST00000528787 MS4A7Q9GZW8 240 aaPredicted RBP6.52□□□□□ -1.37
SSBP3-211ENST00000528787 TOLLIPQ9H0E2 274 aa6.52□□□□□ -1.37
SSBP3-211ENST00000528787 SIRPDQ9H106 197 aa6.52□□□□□ -1.37
SSBP3-211ENST00000528787 GFOD1Q9NXC2 390 aa6.52□□□□□ -1.37
SSBP3-211ENST00000528787 SCP2D1Q9UJQ7 156 aa6.52□□□□□ -1.37
SSBP3-211ENST00000528787 ZNF221Q9UK13 617 aa6.52□□□□□ -1.37
SSBP3-211ENST00000528787 NUP50Q9UKX7 468 aa6.52□□□□□ -1.37
SSBP3-211ENST00000528787 KCNK7Q9Y2U2 307 aa6.52□□□□□ -1.37
SSBP3-211ENST00000528787 RBM7Q9Y580 266 aaKnown RBP6.52□□□□□ -1.37
SSBP3-211ENST00000528787 FLNAP21333 2647 aaKnown RBP6.51□□□□□ -1.37
SSBP3-211ENST00000528787 A0A1B0GW55 424 aa6.51□□□□□ -1.37
SSBP3-211ENST00000528787 BTBD17A6NE02 478 aa6.51□□□□□ -1.37
SSBP3-211ENST00000528787 RAB29O14966 203 aa6.51□□□□□ -1.37
SSBP3-211ENST00000528787 FBP1P09467 338 aa6.51□□□□□ -1.37
SSBP3-211ENST00000528787 DUX4L2P0CJ85 424 aa6.51□□□□□ -1.37
SSBP3-211ENST00000528787 DUX4L3P0CJ86 424 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms