RNA–Protein interactions for RNA: ENST00000528001.1

CNKSR1-211, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 4

Gene CNKSR1, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-211ENST00000528001 MDFIC2A0A1B0GVS7 189 aa10.6□□□□□ -0.71
CNKSR1-211ENST00000528001 MEX3AA1L020 520 aaKnown RBP10.6□□□□□ -0.71
CNKSR1-211ENST00000528001 MFNGO00587 321 aa10.6□□□□□ -0.71
CNKSR1-211ENST00000528001 TOR1AO14656 332 aa10.6□□□□□ -0.71
CNKSR1-211ENST00000528001 HOXA3O43365 443 aaPredicted RBP10.6□□□□□ -0.71
CNKSR1-211ENST00000528001 DIRAS3O95661 229 aa10.6□□□□□ -0.71
CNKSR1-211ENST00000528001 CLEC2LP0C7M8 214 aa10.6□□□□□ -0.71
CNKSR1-211ENST00000528001 OMGP23515 440 aa10.6□□□□□ -0.71
CNKSR1-211ENST00000528001 RPS19P39019 145 aaKnown RBP10.6□□□□□ -0.71
CNKSR1-211ENST00000528001 GDNFP39905 211 aa10.6□□□□□ -0.71
CNKSR1-211ENST00000528001 RPL5P46777 297 aaKnown RBP10.6□□□□□ -0.71
CNKSR1-211ENST00000528001 EFNB2P52799 333 aa10.6□□□□□ -0.71
CNKSR1-211ENST00000528001 LOXL3P58215 753 aa10.6□□□□□ -0.71
CNKSR1-211ENST00000528001 MXD1Q05195 221 aa10.6□□□□□ -0.71
CNKSR1-211ENST00000528001 HMGN3Q15651 99 aa10.6□□□□□ -0.71
CNKSR1-211ENST00000528001 CTF1Q16619 201 aa10.6□□□□□ -0.71
CNKSR1-211ENST00000528001 SRSF7Q16629 238 aaKnown RBP eCLIP10.6□□□□□ -0.71
CNKSR1-211ENST00000528001 KRTAP24-1Q3LI83 254 aa10.6□□□□□ -0.71
CNKSR1-211ENST00000528001 OR4K15Q8NH41 348 aa10.6□□□□□ -0.71
CNKSR1-211ENST00000528001 ARHGAP5-AS1Q96IT6 56 aa10.6□□□□□ -0.71
CNKSR1-211ENST00000528001 MMP28Q9H239 520 aa10.6□□□□□ -0.71
CNKSR1-211ENST00000528001 ZNF286AQ9HBT8 521 aa10.6□□□□□ -0.71
CNKSR1-211ENST00000528001 GFOD1Q9NXC2 390 aa10.6□□□□□ -0.71
CNKSR1-211ENST00000528001 DPM3Q9P2X0 92 aa10.6□□□□□ -0.71
CNKSR1-211ENST00000528001 JPT1Q9UK76 154 aa10.6□□□□□ -0.71
CNKSR1-211ENST00000528001 SOX21Q9Y651 276 aaPredicted RBP10.6□□□□□ -0.71
CNKSR1-211ENST00000528001 BTBD17A6NE02 478 aa10.59□□□□□ -0.71
CNKSR1-211ENST00000528001 LEUTXA8MZ59 168 aa10.59□□□□□ -0.71
CNKSR1-211ENST00000528001 BUB1B-PAK6H3BSN5 160 aa10.59□□□□□ -0.71
CNKSR1-211ENST00000528001 J3QR06 171 aa10.59□□□□□ -0.71
CNKSR1-211ENST00000528001 GSTP1P09211 210 aaKnown RBP10.59□□□□□ -0.71
CNKSR1-211ENST00000528001 HIST1H1DP16402 221 aaKnown RBP10.59□□□□□ -0.71
CNKSR1-211ENST00000528001 RCC1P18754 421 aaPredicted RBP10.59□□□□□ -0.71
CNKSR1-211ENST00000528001 ARHGDIBP52566 201 aa10.59□□□□□ -0.71
CNKSR1-211ENST00000528001 PRB3Q04118 309 aaPredicted RBP10.59□□□□□ -0.71
CNKSR1-211ENST00000528001 PLA2G7Q13093 441 aa10.59□□□□□ -0.71
CNKSR1-211ENST00000528001 LRRC75BQ2VPJ9 315 aa10.59□□□□□ -0.71
CNKSR1-211ENST00000528001 IDNKQ5T6J7 187 aa10.59□□□□□ -0.71
CNKSR1-211ENST00000528001 CCDC144NLQ6NUI1 221 aa10.59□□□□□ -0.71
CNKSR1-211ENST00000528001 C16orf87Q6PH81 154 aa10.59□□□□□ -0.71
CNKSR1-211ENST00000528001 LGALS14Q8TCE9 139 aa10.59□□□□□ -0.71
CNKSR1-211ENST00000528001 CCDC107Q8WV48 283 aa10.59□□□□□ -0.71
CNKSR1-211ENST00000528001 CMTM3Q96MX0 182 aa10.59□□□□□ -0.71
CNKSR1-211ENST00000528001 CMSS1Q9BQ75 279 aaKnown RBP10.59□□□□□ -0.71
CNKSR1-211ENST00000528001 TAF9BQ9HBM6 251 aa10.59□□□□□ -0.71
CNKSR1-211ENST00000528001 RHBDL2Q9NX52 303 aa10.59□□□□□ -0.71
CNKSR1-211ENST00000528001 AK3Q9UIJ7 227 aa10.59□□□□□ -0.71
CNKSR1-211ENST00000528001 PSG11Q9UQ72 335 aa10.59□□□□□ -0.71
CNKSR1-211ENST00000528001 A0A0B4J203 849 aa10.58□□□□□ -0.72
CNKSR1-211ENST00000528001 A0A1W2PRD5 423 aa10.58□□□□□ -0.72
CNKSR1-211ENST00000528001 A0A1W2PRF3 423 aa10.58□□□□□ -0.72
CNKSR1-211ENST00000528001 A0A1W2PRM7 423 aa10.58□□□□□ -0.72
CNKSR1-211ENST00000528001 SMIM30A4D0T7 59 aa10.58□□□□□ -0.72
CNKSR1-211ENST00000528001 RNF212BA8MTL3 300 aa10.58□□□□□ -0.72
CNKSR1-211ENST00000528001 LY6LH3BQJ8 138 aa10.58□□□□□ -0.72
CNKSR1-211ENST00000528001 SDCBPO00560 298 aaPredicted RBP10.58□□□□□ -0.72
CNKSR1-211ENST00000528001 HBZP02008 142 aa10.58□□□□□ -0.72
CNKSR1-211ENST00000528001 SNRPBP14678 240 aaKnown RBP10.58□□□□□ -0.72
CNKSR1-211ENST00000528001 NFYBP25208 207 aa10.58□□□□□ -0.72
CNKSR1-211ENST00000528001 COMPP49747 757 aaPredicted RBP10.58□□□□□ -0.72
CNKSR1-211ENST00000528001 TMBIM6P55061 237 aa10.58□□□□□ -0.72
CNKSR1-211ENST00000528001 NCS1P62166 190 aa10.58□□□□□ -0.72
CNKSR1-211ENST00000528001 LSM3P62310 102 aaKnown RBP10.58□□□□□ -0.72
CNKSR1-211ENST00000528001 PITPNAQ00169 270 aa10.58□□□□□ -0.72
CNKSR1-211ENST00000528001 Q6ZS49 121 aa10.58□□□□□ -0.72
CNKSR1-211ENST00000528001 LHFPL4Q7Z7J7 247 aa10.58□□□□□ -0.72
CNKSR1-211ENST00000528001 RFESDQ8TAC1 157 aa10.58□□□□□ -0.72
CNKSR1-211ENST00000528001 RAB2BQ8WUD1 216 aa10.58□□□□□ -0.72
CNKSR1-211ENST00000528001 ACOT12Q8WYK0 555 aa10.58□□□□□ -0.72
CNKSR1-211ENST00000528001 GALMQ96C23 342 aa10.58□□□□□ -0.72
CNKSR1-211ENST00000528001 MDFIQ99750 246 aa10.58□□□□□ -0.72
CNKSR1-211ENST00000528001 OCSTAMPQ9BR26 566 aa10.58□□□□□ -0.72
CNKSR1-211ENST00000528001 ATG5Q9H1Y0 275 aa10.58□□□□□ -0.72
CNKSR1-211ENST00000528001 ABCG5Q9H222 651 aa10.58□□□□□ -0.72
CNKSR1-211ENST00000528001 CHMP1AQ9HD42 196 aaPredicted RBP10.58□□□□□ -0.72
CNKSR1-211ENST00000528001 VPREB3Q9UKI3 123 aa10.58□□□□□ -0.72
CNKSR1-211ENST00000528001 KCNK7Q9Y2U2 307 aa10.58□□□□□ -0.72
CNKSR1-211ENST00000528001 TRAV39A0A0B4J263 110 aa10.57□□□□□ -0.72
CNKSR1-211ENST00000528001 TMEM89A2RUT3 159 aa10.57□□□□□ -0.72
CNKSR1-211ENST00000528001 ITGB1BP1O14713 200 aa10.57□□□□□ -0.72
CNKSR1-211ENST00000528001 YPEL1O60688 119 aa10.57□□□□□ -0.72
CNKSR1-211ENST00000528001 RGS11O94810 467 aa10.57□□□□□ -0.72
CNKSR1-211ENST00000528001 IGHV4-59P01825 116 aa10.57□□□□□ -0.72
CNKSR1-211ENST00000528001 CD3GP09693 182 aa10.57□□□□□ -0.72
CNKSR1-211ENST00000528001 HKR1P10072 659 aa10.57□□□□□ -0.72
CNKSR1-211ENST00000528001 DTYMKP23919 212 aa10.57□□□□□ -0.72
CNKSR1-211ENST00000528001 TGFBR1P36897 503 aa10.57□□□□□ -0.72
CNKSR1-211ENST00000528001 SERPINB10P48595 397 aa10.57□□□□□ -0.72
CNKSR1-211ENST00000528001 ZNF137PP52743 207 aa10.57□□□□□ -0.72
CNKSR1-211ENST00000528001 VBP1P61758 197 aa10.57□□□□□ -0.72
CNKSR1-211ENST00000528001 MRPS15P82914 257 aaKnown RBP10.57□□□□□ -0.72
CNKSR1-211ENST00000528001 MADCAM1Q13477 382 aa10.57□□□□□ -0.72
CNKSR1-211ENST00000528001 PNLIPRP3Q17RR3 467 aa10.57□□□□□ -0.72
CNKSR1-211ENST00000528001 MOGAT2Q3SYC2 334 aa10.57□□□□□ -0.72
CNKSR1-211ENST00000528001 LDLRAD2Q5SZI1 272 aa10.57□□□□□ -0.72
CNKSR1-211ENST00000528001 GPR107Q5VW38 600 aa10.57□□□□□ -0.72
CNKSR1-211ENST00000528001 BAIAP2L2Q6UXY1 529 aa10.57□□□□□ -0.72
CNKSR1-211ENST00000528001 SLC25A48Q6ZT89 311 aaKnown RBP10.57□□□□□ -0.72
CNKSR1-211ENST00000528001 DTX3Q8N9I9 347 aa10.57□□□□□ -0.72
CNKSR1-211ENST00000528001 ZNF439Q8NDP4 499 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms