RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 SLC35E3Q7Z769 313 aa10.73□□□□□ -0.69
CAPN1-208ENST00000527323 YRDCQ86U90 279 aaKnown RBP10.73□□□□□ -0.69
CAPN1-208ENST00000527323 SCGB1C1Q8TD33 95 aa10.73□□□□□ -0.69
CAPN1-208ENST00000527323 ATP5SQ99766 215 aa10.73□□□□□ -0.69
CAPN1-208ENST00000527323 TLN1Q9Y490 2541 aaKnown RBP10.73□□□□□ -0.69
CAPN1-208ENST00000527323 EXPH5Q8NEV8 1989 aa10.73□□□□□ -0.69
CAPN1-208ENST00000527323 IGKV1D-13A0A0B4J2D9 117 aa10.72□□□□□ -0.69
CAPN1-208ENST00000527323 RPL36A-HNRNPH2H7BZ11 118 aa10.72□□□□□ -0.69
CAPN1-208ENST00000527323 DKK1O94907 266 aa10.72□□□□□ -0.69
CAPN1-208ENST00000527323 IGKV1-13P0DP09 117 aa10.72□□□□□ -0.69
CAPN1-208ENST00000527323 CARD18P57730 90 aa10.72□□□□□ -0.69
CAPN1-208ENST00000527323 TAS2R30P59541 319 aa10.72□□□□□ -0.69
CAPN1-208ENST00000527323 RAC1P63000 192 aa10.72□□□□□ -0.69
CAPN1-208ENST00000527323 ID3Q02535 119 aa10.72□□□□□ -0.69
CAPN1-208ENST00000527323 BAXQ07812 192 aa10.72□□□□□ -0.69
CAPN1-208ENST00000527323 EXT1Q16394 746 aa10.72□□□□□ -0.69
CAPN1-208ENST00000527323 TMEM42Q69YG0 159 aa10.72□□□□□ -0.69
CAPN1-208ENST00000527323 C17orf78Q8N4C9 275 aa10.72□□□□□ -0.69
CAPN1-208ENST00000527323 CT55Q8WUE5 264 aa10.72□□□□□ -0.69
CAPN1-208ENST00000527323 LRFN1Q9P244 771 aa10.72□□□□□ -0.69
CAPN1-208ENST00000527323 PRR33A8MZF0 331 aa10.72□□□□□ -0.69
CAPN1-208ENST00000527323 TOX3O15405 576 aaPredicted RBP10.72□□□□□ -0.69
CAPN1-208ENST00000527323 FTH1P19P0C7X4 201 aa10.72□□□□□ -0.69
CAPN1-208ENST00000527323 NTF4P34130 210 aa10.72□□□□□ -0.69
CAPN1-208ENST00000527323 TMEM267Q0VDI3 215 aaPredicted RBP10.72□□□□□ -0.69
CAPN1-208ENST00000527323 C1orf87Q8N0U7 546 aa10.72□□□□□ -0.69
CAPN1-208ENST00000527323 FGFBP3Q8TAT2 258 aa10.72□□□□□ -0.69
CAPN1-208ENST00000527323 FRZBQ92765 325 aa10.72□□□□□ -0.69
CAPN1-208ENST00000527323 FOXB1Q99853 325 aa10.72□□□□□ -0.69
CAPN1-208ENST00000527323 PRO1933Q9H354 126 aa10.72□□□□□ -0.69
CAPN1-208ENST00000527323 IL36GQ9NZH8 169 aa10.72□□□□□ -0.69
CAPN1-208ENST00000527323 hCG_38984A0A1B0GV85 526 aa10.71□□□□□ -0.69
CAPN1-208ENST00000527323 SLC22A20A6NK97 555 aa10.71□□□□□ -0.69
CAPN1-208ENST00000527323 IGHV3-9P01782 118 aa10.71□□□□□ -0.69
CAPN1-208ENST00000527323 BCL3P20749 454 aa10.71□□□□□ -0.69
CAPN1-208ENST00000527323 SSR4P51571 173 aa10.71□□□□□ -0.69
CAPN1-208ENST00000527323 IL24Q13007 206 aa10.71□□□□□ -0.69
CAPN1-208ENST00000527323 OR51H1Q8NH63 302 aa10.71□□□□□ -0.69
CAPN1-208ENST00000527323 OR6C6A6NF89 314 aa10.71□□□□□ -0.69
CAPN1-208ENST00000527323 OR5H1A6NKK0 313 aa10.71□□□□□ -0.69
CAPN1-208ENST00000527323 DFFBO76075 338 aa10.71□□□□□ -0.69
CAPN1-208ENST00000527323 MDKP21741 143 aaPredicted RBP10.71□□□□□ -0.69
CAPN1-208ENST00000527323 FGF8P55075 233 aaPredicted RBP10.71□□□□□ -0.69
CAPN1-208ENST00000527323 GAMTQ14353 236 aa10.71□□□□□ -0.69
CAPN1-208ENST00000527323 PCOLCEQ15113 449 aa10.71□□□□□ -0.69
CAPN1-208ENST00000527323 IZUMO4Q1ZYL8 232 aa10.71□□□□□ -0.69
CAPN1-208ENST00000527323 HIST3H2BBQ8N257 126 aa10.71□□□□□ -0.69
CAPN1-208ENST00000527323 SIGLEC12Q96PQ1 595 aa10.71□□□□□ -0.69
CAPN1-208ENST00000527323 RSG1Q9BU20 258 aa10.71□□□□□ -0.69
CAPN1-208ENST00000527323 OR2H1Q9GZK4 316 aa10.71□□□□□ -0.69
CAPN1-208ENST00000527323 WNT5BQ9H1J7 359 aa10.71□□□□□ -0.69
CAPN1-208ENST00000527323 C9J4A7 227 aa10.71□□□□□ -0.7
CAPN1-208ENST00000527323 CLDN34H7C241 214 aa10.71□□□□□ -0.7
CAPN1-208ENST00000527323 CXCL13O43927 109 aa10.71□□□□□ -0.7
CAPN1-208ENST00000527323 SERPINE2P07093 398 aa10.71□□□□□ -0.7
CAPN1-208ENST00000527323 FGF5P12034 268 aa10.71□□□□□ -0.7
CAPN1-208ENST00000527323 S100GP29377 79 aa10.71□□□□□ -0.7
CAPN1-208ENST00000527323 NMSQ5H8A3 153 aa10.71□□□□□ -0.7
CAPN1-208ENST00000527323 ZNF787Q6DD87 383 aa10.71□□□□□ -0.7
CAPN1-208ENST00000527323 ODF3L1Q8IXM7 274 aa10.71□□□□□ -0.7
CAPN1-208ENST00000527323 CPT1CQ8TCG5 803 aa10.71□□□□□ -0.7
CAPN1-208ENST00000527323 Q9N2K0 584 aa10.71□□□□□ -0.7
CAPN1-208ENST00000527323 UFSP2Q9NUQ7 469 aa10.71□□□□□ -0.7
CAPN1-208ENST00000527323 ELOA3CA0A087WX78 387 aaPredicted RBP10.7□□□□□ -0.7
CAPN1-208ENST00000527323 LOC102723971A0A1B0GUV8 181 aa10.7□□□□□ -0.7
CAPN1-208ENST00000527323 GJE1A6NN92 205 aa10.7□□□□□ -0.7
CAPN1-208ENST00000527323 PTBP3O95758 552 aaKnown RBP10.7□□□□□ -0.7
CAPN1-208ENST00000527323 HIST1H1BP16401 226 aaKnown RBP10.7□□□□□ -0.7
CAPN1-208ENST00000527323 RAC3P60763 192 aa10.7□□□□□ -0.7
CAPN1-208ENST00000527323 MRPL14Q6P1L8 145 aaKnown RBP10.7□□□□□ -0.7
CAPN1-208ENST00000527323 DBX2Q6ZNG2 339 aa10.7□□□□□ -0.7
CAPN1-208ENST00000527323 LINC00696Q6ZRV3 163 aa10.7□□□□□ -0.7
CAPN1-208ENST00000527323 SSX9Q7RTT3 188 aa10.7□□□□□ -0.7
CAPN1-208ENST00000527323 ABHD5Q8WTS1 349 aa10.7□□□□□ -0.7
CAPN1-208ENST00000527323 ZNF665Q9H7R5 613 aa10.7□□□□□ -0.7
CAPN1-208ENST00000527323 PLA2G3Q9NZ20 509 aa10.7□□□□□ -0.7
CAPN1-208ENST00000527323 ZNF391Q9UJN7 358 aa10.7□□□□□ -0.7
CAPN1-208ENST00000527323 SSUH2Q9Y2M2 353 aa10.7□□□□□ -0.7
CAPN1-208ENST00000527323 NOSIPQ9Y314 301 aaKnown RBP10.7□□□□□ -0.7
CAPN1-208ENST00000527323 B4DEV8 164 aa10.7□□□□□ -0.7
CAPN1-208ENST00000527323 CBR3O75828 277 aa10.7□□□□□ -0.7
CAPN1-208ENST00000527323 TRAPPC6AO75865 159 aa10.7□□□□□ -0.7
CAPN1-208ENST00000527323 PGA5P0DJD9 388 aa10.7□□□□□ -0.7
CAPN1-208ENST00000527323 UCP1P25874 307 aa10.7□□□□□ -0.7
CAPN1-208ENST00000527323 PCBD1P61457 104 aa10.7□□□□□ -0.7
CAPN1-208ENST00000527323 IL11RAQ14626 422 aa10.7□□□□□ -0.7
CAPN1-208ENST00000527323 ZNF880Q6PDB4 577 aa10.7□□□□□ -0.7
CAPN1-208ENST00000527323 ABHD14BQ96IU4 210 aa10.7□□□□□ -0.7
CAPN1-208ENST00000527323 CABLES2Q9BTV7 478 aa10.7□□□□□ -0.7
CAPN1-208ENST00000527323 RPRMQ9NS64 109 aa10.7□□□□□ -0.7
CAPN1-208ENST00000527323 KMT2EQ8IZD2 1858 aa10.69□□□□□ -0.7
CAPN1-208ENST00000527323 GPM6AP51674 278 aa10.69□□□□□ -0.7
CAPN1-208ENST00000527323 FOXO1Q12778 655 aa10.69□□□□□ -0.7
CAPN1-208ENST00000527323 C9orf135Q5VTT2 229 aa10.69□□□□□ -0.7
CAPN1-208ENST00000527323 RPS19BP1Q86WX3 136 aaKnown RBP10.69□□□□□ -0.7
CAPN1-208ENST00000527323 OR13D1Q8NGV5 346 aa10.69□□□□□ -0.7
CAPN1-208ENST00000527323 SNX22Q96L94 193 aa10.69□□□□□ -0.7
CAPN1-208ENST00000527323 HS3ST6Q96QI5 342 aa10.69□□□□□ -0.7
CAPN1-208ENST00000527323 SF3B5Q9BWJ5 86 aaKnown RBP10.69□□□□□ -0.7
CAPN1-208ENST00000527323 PROK2Q9HC23 129 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms