RNA–Protein interactions for RNA: ENST00000527158.2

SNRNP35-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best)

Gene SNRNP35, Length 2,161 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-204ENST00000527158 CRYM-AS1A6NIL9 109 aa13.66□□□□□ -0.22
SNRNP35-204ENST00000527158 H0YIZ8 118 aa13.66□□□□□ -0.22
SNRNP35-204ENST00000527158 H7C2Y5 167 aa13.66□□□□□ -0.22
SNRNP35-204ENST00000527158 NUPL2O15504 423 aaKnown RBP13.66□□□□□ -0.22
SNRNP35-204ENST00000527158 SPRY3O43610 288 aa13.66□□□□□ -0.22
SNRNP35-204ENST00000527158 NDUFA2O43678 99 aa13.66□□□□□ -0.22
SNRNP35-204ENST00000527158 PTBP3O95758 552 aaKnown RBP13.66□□□□□ -0.22
SNRNP35-204ENST00000527158 THBDP07204 575 aa13.66□□□□□ -0.22
SNRNP35-204ENST00000527158 LMO1P25800 156 aa13.66□□□□□ -0.22
SNRNP35-204ENST00000527158 PJVKQ0ZLH3 352 aa13.66□□□□□ -0.22
SNRNP35-204ENST00000527158 IL15RAQ13261 267 aa13.66□□□□□ -0.22
SNRNP35-204ENST00000527158 ZNF497Q6ZNH5 498 aa13.66□□□□□ -0.22
SNRNP35-204ENST00000527158 OR4A4PQ8NGN8 299 aa13.66□□□□□ -0.22
SNRNP35-204ENST00000527158 OR10Z1Q8NGY1 313 aa13.66□□□□□ -0.22
SNRNP35-204ENST00000527158 LRRC29Q8WV35 223 aa13.66□□□□□ -0.22
SNRNP35-204ENST00000527158 MRPL24Q96A35 216 aaKnown RBP13.66□□□□□ -0.22
SNRNP35-204ENST00000527158 TRAPPC2LQ9UL33 140 aa13.66□□□□□ -0.22
SNRNP35-204ENST00000527158 POMT1Q9Y6A1 747 aa13.66□□□□□ -0.22
SNRNP35-204ENST00000527158 DPRXA6NFQ7 191 aa13.66□□□□□ -0.22
SNRNP35-204ENST00000527158 RCC1P18754 421 aaPredicted RBP13.66□□□□□ -0.22
SNRNP35-204ENST00000527158 BLOC1S1P78537 153 aa13.66□□□□□ -0.22
SNRNP35-204ENST00000527158 HLA-DRB3P79483 266 aa13.66□□□□□ -0.22
SNRNP35-204ENST00000527158 ANKRD55Q3KP44 614 aa13.66□□□□□ -0.22
SNRNP35-204ENST00000527158 RRNAD1Q96FB5 475 aaKnown RBP13.66□□□□□ -0.22
SNRNP35-204ENST00000527158 OR2V2Q96R30 315 aa13.66□□□□□ -0.22
SNRNP35-204ENST00000527158 PRORYQ9H606 182 aa13.66□□□□□ -0.22
SNRNP35-204ENST00000527158 CCL21O00585 134 aa13.65□□□□□ -0.22
SNRNP35-204ENST00000527158 FAM157CP0CG43 387 aa13.65□□□□□ -0.22
SNRNP35-204ENST00000527158 BSPH1Q075Z2 132 aa13.65□□□□□ -0.22
SNRNP35-204ENST00000527158 SMCO1Q147U7 214 aa13.65□□□□□ -0.22
SNRNP35-204ENST00000527158 HERPUD1Q15011 391 aa13.65□□□□□ -0.22
SNRNP35-204ENST00000527158 IQCF2Q8IXL9 164 aa13.65□□□□□ -0.22
SNRNP35-204ENST00000527158 PRR7Q8TB68 274 aa13.65□□□□□ -0.22
SNRNP35-204ENST00000527158 PLPPR1Q8TBJ4 325 aa13.65□□□□□ -0.22
SNRNP35-204ENST00000527158 RTN4IP1Q8WWV3 396 aaPredicted RBP13.65□□□□□ -0.22
SNRNP35-204ENST00000527158 SMIM8Q96KF7 97 aa13.65□□□□□ -0.22
SNRNP35-204ENST00000527158 MEGF10Q96KG7 1140 aa13.65□□□□□ -0.22
SNRNP35-204ENST00000527158 RSRP1Q9BUV0 290 aa13.65□□□□□ -0.22
SNRNP35-204ENST00000527158 SLC5A7Q9GZV3 580 aa13.65□□□□□ -0.22
SNRNP35-204ENST00000527158 TLN1Q9Y490 2541 aaKnown RBP13.65□□□□□ -0.22
SNRNP35-204ENST00000527158 FAM74A7A6NL05 159 aa13.65□□□□□ -0.22
SNRNP35-204ENST00000527158 F8W036 122 aa13.65□□□□□ -0.22
SNRNP35-204ENST00000527158 IFNL4K9M1U5 179 aa13.65□□□□□ -0.22
SNRNP35-204ENST00000527158 GAPDHP04406 335 aaKnown RBP13.65□□□□□ -0.22
SNRNP35-204ENST00000527158 CFHR2P36980 270 aa13.65□□□□□ -0.22
SNRNP35-204ENST00000527158 CEBPDP49716 269 aaPredicted RBP13.65□□□□□ -0.22
SNRNP35-204ENST00000527158 ASCL1P50553 236 aa13.65□□□□□ -0.22
SNRNP35-204ENST00000527158 FAM74A3Q4VXF1 159 aa13.65□□□□□ -0.22
SNRNP35-204ENST00000527158 DHRS7BQ6IAN0 325 aaPredicted RBP13.65□□□□□ -0.22
SNRNP35-204ENST00000527158 GAPTQ8N292 157 aa13.65□□□□□ -0.22
SNRNP35-204ENST00000527158 ZNF565Q8N9K5 539 aa13.65□□□□□ -0.22
SNRNP35-204ENST00000527158 CCDC71LQ8N9Z2 235 aa13.65□□□□□ -0.22
SNRNP35-204ENST00000527158 OR10J5Q8NHC4 309 aa13.65□□□□□ -0.22
SNRNP35-204ENST00000527158 WFIKKN1Q96NZ8 548 aa13.65□□□□□ -0.22
SNRNP35-204ENST00000527158 SLC2A9Q9NRM0 540 aa13.65□□□□□ -0.22
SNRNP35-204ENST00000527158 ZFP57Q9NU63 452 aa13.65□□□□□ -0.22
SNRNP35-204ENST00000527158 PRR13Q9NZ81 148 aa13.65□□□□□ -0.22
SNRNP35-204ENST00000527158 ZNF705EA8MWA4 302 aaPredicted RBP13.64□□□□□ -0.23
SNRNP35-204ENST00000527158 ADAP1O75689 374 aa13.64□□□□□ -0.23
SNRNP35-204ENST00000527158 IFNA21P01568 189 aa13.64□□□□□ -0.23
SNRNP35-204ENST00000527158 PHLDA2Q53GA4 152 aa13.64□□□□□ -0.23
SNRNP35-204ENST00000527158 C5orf24Q7Z6I8 188 aa13.64□□□□□ -0.23
SNRNP35-204ENST00000527158 TMED6Q8WW62 240 aa13.64□□□□□ -0.23
SNRNP35-204ENST00000527158 NAA60Q9H7X0 242 aa13.64□□□□□ -0.23
SNRNP35-204ENST00000527158 ZDHHC8Q9ULC8 765 aa13.64□□□□□ -0.23
SNRNP35-204ENST00000527158 IGKV1-6A0A0C4DH72 117 aa13.64□□□□□ -0.23
SNRNP35-204ENST00000527158 VSTM5A8MXK1 200 aa13.64□□□□□ -0.23
SNRNP35-204ENST00000527158 PSPNO60542 156 aa13.64□□□□□ -0.23
SNRNP35-204ENST00000527158 TNFSF4P23510 183 aa13.64□□□□□ -0.23
SNRNP35-204ENST00000527158 FAM185AQ8N0U4 392 aa13.64□□□□□ -0.23
SNRNP35-204ENST00000527158 CNTNAP3Q9BZ76 1288 aa13.64□□□□□ -0.23
SNRNP35-204ENST00000527158 OR5AC2Q9NZP5 309 aa13.64□□□□□ -0.23
SNRNP35-204ENST00000527158 WIPI2Q9Y4P8 454 aa13.64□□□□□ -0.23
SNRNP35-204ENST00000527158 TMEM30CPA0ZSE6 113 aa13.63□□□□□ -0.23
SNRNP35-204ENST00000527158 SRRM5B3KS81 715 aa13.63□□□□□ -0.23
SNRNP35-204ENST00000527158 TUSC2O75896 110 aa13.63□□□□□ -0.23
SNRNP35-204ENST00000527158 JTBO76095 146 aa13.63□□□□□ -0.23
SNRNP35-204ENST00000527158 CHRNB4P30926 498 aa13.63□□□□□ -0.23
SNRNP35-204ENST00000527158 KCNJ3P48549 501 aa13.63□□□□□ -0.23
SNRNP35-204ENST00000527158 RAB32Q13637 225 aa13.63□□□□□ -0.23
SNRNP35-204ENST00000527158 MOGAT3Q86VF5 341 aa13.63□□□□□ -0.23
SNRNP35-204ENST00000527158 FAM90A1Q86YD7 464 aa13.63□□□□□ -0.23
SNRNP35-204ENST00000527158 PUSL1Q8N0Z8 303 aaKnown RBP13.63□□□□□ -0.23
SNRNP35-204ENST00000527158 ITLN1Q8WWA0 313 aa13.63□□□□□ -0.23
SNRNP35-204ENST00000527158 IL1F10Q8WWZ1 152 aa13.63□□□□□ -0.23
SNRNP35-204ENST00000527158 GALNT14Q96FL9 552 aa13.63□□□□□ -0.23
SNRNP35-204ENST00000527158 KIRREL1Q96J84 757 aa13.63□□□□□ -0.23
SNRNP35-204ENST00000527158 OR10C1Q96KK4 312 aa13.63□□□□□ -0.23
SNRNP35-204ENST00000527158 CAV2P51636 162 aa13.62□□□□□ -0.23
SNRNP35-204ENST00000527158 TNFAIP6P98066 277 aaPredicted RBP13.62□□□□□ -0.23
SNRNP35-204ENST00000527158 HOXA4Q00056 320 aaPredicted RBP13.62□□□□□ -0.23
SNRNP35-204ENST00000527158 SLC35E4Q6ICL7 350 aa13.62□□□□□ -0.23
SNRNP35-204ENST00000527158 PCSK4Q6UW60 755 aa13.62□□□□□ -0.23
SNRNP35-204ENST00000527158 SECTM1Q8WVN6 248 aa13.62□□□□□ -0.23
SNRNP35-204ENST00000527158 CABLES2Q9BTV7 478 aa13.62□□□□□ -0.23
SNRNP35-204ENST00000527158 SUCNR1Q9BXA5 334 aa13.62□□□□□ -0.23
SNRNP35-204ENST00000527158 PLEKHA2Q9HB19 425 aa13.62□□□□□ -0.23
SNRNP35-204ENST00000527158 TREM1Q9NP99 234 aa13.62□□□□□ -0.23
SNRNP35-204ENST00000527158 MBNL3Q9NUK0 354 aaKnown RBP13.62□□□□□ -0.23
SNRNP35-204ENST00000527158 UQCC1Q9NVA1 299 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms