RNA–Protein interactions for RNA: ENST00000525078.1

USP47-204, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-204ENST00000525078 SFRP2Q96HF1 295 aa3.87□□□□□ -1.79
USP47-204ENST00000525078 ANKRD36BP1Q96IX9 119 aa3.87□□□□□ -1.79
USP47-204ENST00000525078 OR7D2Q96RA2 312 aa3.87□□□□□ -1.79
USP47-204ENST00000525078 DDA1Q9BW61 102 aa3.87□□□□□ -1.79
USP47-204ENST00000525078 BOLA2Q9H3K6 86 aa3.87□□□□□ -1.79
USP47-204ENST00000525078 NOX3Q9HBY0 568 aa3.87□□□□□ -1.79
USP47-204ENST00000525078 SMPXQ9UHP9 88 aa3.87□□□□□ -1.79
USP47-204ENST00000525078 LINC00527Q9UJ94 153 aa3.87□□□□□ -1.79
USP47-204ENST00000525078 PKIGQ9Y2B9 76 aa3.87□□□□□ -1.79
USP47-204ENST00000525078 CARHSP1Q9Y2V2 147 aaKnown RBP3.87□□□□□ -1.79
USP47-204ENST00000525078 TOP2AP11388 1531 aaKnown RBP3.86□□□□□ -1.79
USP47-204ENST00000525078 IGHV5-51A0A0C4DH38 117 aa3.86□□□□□ -1.79
USP47-204ENST00000525078 A0A1B0GV50 99 aa3.86□□□□□ -1.79
USP47-204ENST00000525078 OR4C46A6NHA9 309 aa3.86□□□□□ -1.79
USP47-204ENST00000525078 C15orf65H3BRN8 121 aa3.86□□□□□ -1.79
USP47-204ENST00000525078 SCO1O75880 301 aa3.86□□□□□ -1.79
USP47-204ENST00000525078 IGHV3-11P01762 117 aa3.86□□□□□ -1.79
USP47-204ENST00000525078 FBP1P09467 338 aa3.86□□□□□ -1.79
USP47-204ENST00000525078 GTF2F2P13984 249 aa3.86□□□□□ -1.79
USP47-204ENST00000525078 GZMMP51124 257 aa3.86□□□□□ -1.79
USP47-204ENST00000525078 MNAT1P51948 309 aa3.86□□□□□ -1.79
USP47-204ENST00000525078 GABARAPL2P60520 117 aa3.86□□□□□ -1.79
USP47-204ENST00000525078 FABP5Q01469 135 aa3.86□□□□□ -1.79
USP47-204ENST00000525078 TMEM267Q0VDI3 215 aaPredicted RBP3.86□□□□□ -1.79
USP47-204ENST00000525078 TSNQ15631 228 aaKnown RBP3.86□□□□□ -1.79
USP47-204ENST00000525078 FAM78AQ5JUQ0 283 aa3.86□□□□□ -1.79
USP47-204ENST00000525078 IGFL2Q6UWQ7 119 aa3.86□□□□□ -1.79
USP47-204ENST00000525078 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.86□□□□□ -1.79
USP47-204ENST00000525078 BORCS7Q96B45 105 aa3.86□□□□□ -1.79
USP47-204ENST00000525078 FAM96AQ9H5X1 160 aa3.86□□□□□ -1.79
USP47-204ENST00000525078 ZNF430Q9H8G1 570 aaPredicted RBP3.86□□□□□ -1.79
USP47-204ENST00000525078 UTP11Q9Y3A2 253 aaKnown RBP3.86□□□□□ -1.79
USP47-204ENST00000525078 GOLGA3Q08378 1498 aa3.86□□□□□ -1.79
USP47-204ENST00000525078 HCFC1P51610 2035 aa3.85□□□□□ -1.79
USP47-204ENST00000525078 TRAV8-1A0A0A6YYK1 113 aa3.85□□□□□ -1.79
USP47-204ENST00000525078 IGKV6-21A0A0C4DH24 114 aa3.85□□□□□ -1.79
USP47-204ENST00000525078 OR6C6A6NF89 314 aa3.85□□□□□ -1.79
USP47-204ENST00000525078 FAM159BA6NKW6 160 aa3.85□□□□□ -1.79
USP47-204ENST00000525078 B4DEV8 164 aa3.85□□□□□ -1.79
USP47-204ENST00000525078 F5H5P2 479 aa3.85□□□□□ -1.79
USP47-204ENST00000525078 TRAF3IP2O43734 574 aaPredicted RBP3.85□□□□□ -1.79
USP47-204ENST00000525078 ATG12O94817 140 aa3.85□□□□□ -1.79
USP47-204ENST00000525078 ZNF688P0C7X2 276 aa3.85□□□□□ -1.79
USP47-204ENST00000525078 RNF224P0DH78 156 aa3.85□□□□□ -1.79
USP47-204ENST00000525078 OR13C7P0DN81 318 aa3.85□□□□□ -1.79
USP47-204ENST00000525078 ESDP10768 282 aa3.85□□□□□ -1.79
USP47-204ENST00000525078 CTLA4P16410 223 aa3.85□□□□□ -1.79
USP47-204ENST00000525078 S100A2P29034 98 aa3.85□□□□□ -1.79
USP47-204ENST00000525078 NUDT1P36639 197 aa3.85□□□□□ -1.79
USP47-204ENST00000525078 ZNF83P51522 516 aa3.85□□□□□ -1.79
USP47-204ENST00000525078 CRISP3P54108 245 aa3.85□□□□□ -1.79
USP47-204ENST00000525078 CTBP2P56545 445 aa3.85□□□□□ -1.79
USP47-204ENST00000525078 RPS24P62847 133 aaKnown RBP3.85□□□□□ -1.79
USP47-204ENST00000525078 TMEM241Q24JQ0 296 aa3.85□□□□□ -1.79
USP47-204ENST00000525078 Q6ZRU5 148 aa3.85□□□□□ -1.79
USP47-204ENST00000525078 TCF23Q7RTU1 214 aa3.85□□□□□ -1.79
USP47-204ENST00000525078 ZNF550Q7Z398 422 aa3.85□□□□□ -1.79
USP47-204ENST00000525078 ZNF429Q86V71 674 aa3.85□□□□□ -1.79
USP47-204ENST00000525078 C1orf158Q8N1D5 194 aa3.85□□□□□ -1.79
USP47-204ENST00000525078 CD177Q8N6Q3 437 aa3.85□□□□□ -1.79
USP47-204ENST00000525078 SLC25A29Q8N8R3 303 aa3.85□□□□□ -1.79
USP47-204ENST00000525078 OR5H2Q8NGV7 314 aa3.85□□□□□ -1.79
USP47-204ENST00000525078 OR4X1Q8NH49 305 aa3.85□□□□□ -1.79
USP47-204ENST00000525078 OR13C6PQ8NH95 151 aa3.85□□□□□ -1.79
USP47-204ENST00000525078 FAM57AQ8TBR7 257 aa3.85□□□□□ -1.79
USP47-204ENST00000525078 APOBEC3DQ96AK3 386 aaPredicted RBP3.85□□□□□ -1.79
USP47-204ENST00000525078 PPP1R2P1Q96PQ5 205 aa3.85□□□□□ -1.79
USP47-204ENST00000525078 ZNF382Q96SR6 550 aa3.85□□□□□ -1.79
USP47-204ENST00000525078 WFDC1Q9HC57 220 aa3.85□□□□□ -1.79
USP47-204ENST00000525078 BIN3Q9NQY0 253 aa3.85□□□□□ -1.79
USP47-204ENST00000525078 IDI2-AS1Q9NZ38 188 aa3.85□□□□□ -1.79
USP47-204ENST00000525078 TAC3Q9UHF0 121 aa3.85□□□□□ -1.79
USP47-204ENST00000525078 NDUFAF1Q9Y375 327 aa3.85□□□□□ -1.79
USP47-204ENST00000525078 CACNG2Q9Y698 323 aa3.85□□□□□ -1.79
USP47-204ENST00000525078 CHD2O14647 1828 aaKnown RBP3.85□□□□□ -1.79
USP47-204ENST00000525078 IGHV5-10-1A0A0J9YXX1 117 aa3.84□□□□□ -1.79
USP47-204ENST00000525078 C5orf63A6NC05 138 aa3.84□□□□□ -1.79
USP47-204ENST00000525078 KRTAP16-1A8MUX0 517 aa3.84□□□□□ -1.79
USP47-204ENST00000525078 BHLHE40O14503 412 aa3.84□□□□□ -1.79
USP47-204ENST00000525078 STK16O75716 305 aa3.84□□□□□ -1.79
USP47-204ENST00000525078 MAS1P04201 325 aa3.84□□□□□ -1.79
USP47-204ENST00000525078 HMGN1P05114 100 aa3.84□□□□□ -1.79
USP47-204ENST00000525078 SEC11BP0C7V7 166 aa3.84□□□□□ -1.79
USP47-204ENST00000525078 PSG2P11465 335 aa3.84□□□□□ -1.79
USP47-204ENST00000525078 CTSEP14091 401 aa3.84□□□□□ -1.79
USP47-204ENST00000525078 ORM2P19652 201 aa3.84□□□□□ -1.79
USP47-204ENST00000525078 SERPINB1P30740 379 aa3.84□□□□□ -1.79
USP47-204ENST00000525078 TCTAP57738 103 aa3.84□□□□□ -1.79
USP47-204ENST00000525078 GNG3P63215 75 aa3.84□□□□□ -1.79
USP47-204ENST00000525078 C15orf32Q32M92 178 aa3.84□□□□□ -1.79
USP47-204ENST00000525078 KRTAP24-1Q3LI83 254 aa3.84□□□□□ -1.79
USP47-204ENST00000525078 FAM201AQ5SY85 155 aa3.84□□□□□ -1.79
USP47-204ENST00000525078 IL34Q6ZMJ4 242 aa3.84□□□□□ -1.79
USP47-204ENST00000525078 TMEM256Q8N2U0 113 aa3.84□□□□□ -1.79
USP47-204ENST00000525078 SMIM20Q8N5G0 67 aa3.84□□□□□ -1.79
USP47-204ENST00000525078 ZDHHC22Q8N966 263 aa3.84□□□□□ -1.79
USP47-204ENST00000525078 Q8N9P0 234 aaPredicted RBP3.84□□□□□ -1.79
USP47-204ENST00000525078 TMEM75Q8N9X5 138 aa3.84□□□□□ -1.79
USP47-204ENST00000525078 OR51H1Q8NH63 302 aa3.84□□□□□ -1.79
USP47-204ENST00000525078 EXOSC8Q96B26 276 aaKnown RBP3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms