RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 NFYAP23511 347 aaPredicted RBP5.94□□□□□ -1.46
VPS11-201ENST00000524454 S100GP29377 79 aa5.94□□□□□ -1.46
VPS11-201ENST00000524454 MPV17P39210 176 aa5.94□□□□□ -1.46
VPS11-201ENST00000524454 NPY4RP50391 375 aa5.94□□□□□ -1.46
VPS11-201ENST00000524454 FABP6P51161 128 aa5.94□□□□□ -1.46
VPS11-201ENST00000524454 NKX2-5P52952 324 aaPredicted RBP5.94□□□□□ -1.46
VPS11-201ENST00000524454 ATP5J2P56134 94 aa5.94□□□□□ -1.46
VPS11-201ENST00000524454 HERV-K104P61576 105 aa5.94□□□□□ -1.46
VPS11-201ENST00000524454 SUPT4H1P63272 117 aaKnown RBP5.94□□□□□ -1.46
VPS11-201ENST00000524454 HLA-DRB3P79483 266 aa5.94□□□□□ -1.46
VPS11-201ENST00000524454 IFITM2Q01629 132 aa5.94□□□□□ -1.46
VPS11-201ENST00000524454 TMEM30BQ3MIR4 351 aa5.94□□□□□ -1.46
VPS11-201ENST00000524454 SPATA46Q5T0L3 261 aa5.94□□□□□ -1.46
VPS11-201ENST00000524454 SLC35E4Q6ICL7 350 aa5.94□□□□□ -1.46
VPS11-201ENST00000524454 VHLLQ6RSH7 139 aa5.94□□□□□ -1.46
VPS11-201ENST00000524454 ZNF497Q6ZNH5 498 aa5.94□□□□□ -1.46
VPS11-201ENST00000524454 WDR86Q86TI4 376 aa5.94□□□□□ -1.46
VPS11-201ENST00000524454 SUMF2Q8NBJ7 301 aa5.94□□□□□ -1.46
VPS11-201ENST00000524454 MAPK1IP1LQ8NDC0 245 aa5.94□□□□□ -1.46
VPS11-201ENST00000524454 OR52B4Q8NGK2 314 aa5.94□□□□□ -1.46
VPS11-201ENST00000524454 Q8TCH9 128 aa5.94□□□□□ -1.46
VPS11-201ENST00000524454 WFDC12Q8WWY7 111 aa5.94□□□□□ -1.46
VPS11-201ENST00000524454 IL22RA2Q969J5 263 aa5.94□□□□□ -1.46
VPS11-201ENST00000524454 TMEM230Q96A57 120 aa5.94□□□□□ -1.46
VPS11-201ENST00000524454 MEGF10Q96KG7 1140 aa5.94□□□□□ -1.46
VPS11-201ENST00000524454 ZNF2Q9BSG1 426 aaPredicted RBP5.94□□□□□ -1.46
VPS11-201ENST00000524454 RTBDNQ9BSG5 229 aaPredicted RBP5.94□□□□□ -1.46
VPS11-201ENST00000524454 MRPL18Q9H0U6 180 aaKnown RBP5.94□□□□□ -1.46
VPS11-201ENST00000524454 WDR13Q9H1Z4 485 aa5.94□□□□□ -1.46
VPS11-201ENST00000524454 CHMP1AQ9HD42 196 aaPredicted RBP5.94□□□□□ -1.46
VPS11-201ENST00000524454 RAB9BQ9NP90 201 aa5.94□□□□□ -1.46
VPS11-201ENST00000524454 TPSG1Q9NRR2 321 aa5.94□□□□□ -1.46
VPS11-201ENST00000524454 COMMD9Q9P000 198 aa5.94□□□□□ -1.46
VPS11-201ENST00000524454 IL19Q9UHD0 177 aa5.94□□□□□ -1.46
VPS11-201ENST00000524454 ZNF230Q9UIE0 474 aaPredicted RBP5.94□□□□□ -1.46
VPS11-201ENST00000524454 KCNIP3Q9Y2W7 256 aa5.94□□□□□ -1.46
VPS11-201ENST00000524454 HSPB11Q9Y547 144 aa5.94□□□□□ -1.46
VPS11-201ENST00000524454 F8P00451 2351 aa5.94□□□□□ -1.46
VPS11-201ENST00000524454 CADP27708 2225 aa5.94□□□□□ -1.46
VPS11-201ENST00000524454 HIVEP1P15822 2718 aa5.93□□□□□ -1.46
VPS11-201ENST00000524454 IGKV1D-8A0A087WSZ0 117 aa5.93□□□□□ -1.46
VPS11-201ENST00000524454 A0A0D9SG52 128 aa5.93□□□□□ -1.46
VPS11-201ENST00000524454 SRRM5B3KS81 715 aa5.93□□□□□ -1.46
VPS11-201ENST00000524454 F8VVB4 439 aa5.93□□□□□ -1.46
VPS11-201ENST00000524454 F8VWA3 439 aa5.93□□□□□ -1.46
VPS11-201ENST00000524454 SLC33A1O00400 549 aaPredicted RBP5.93□□□□□ -1.46
VPS11-201ENST00000524454 GOSR2O14653 212 aa5.93□□□□□ -1.46
VPS11-201ENST00000524454 LY6HO94772 140 aa5.93□□□□□ -1.46
VPS11-201ENST00000524454 OR2F2O95006 317 aa5.93□□□□□ -1.46
VPS11-201ENST00000524454 PPYP01298 95 aa5.93□□□□□ -1.46
VPS11-201ENST00000524454 IFNA7P01567 189 aa5.93□□□□□ -1.46
VPS11-201ENST00000524454 IGHV4-39P01824 125 aa5.93□□□□□ -1.46
VPS11-201ENST00000524454 LYL1P12980 280 aa5.93□□□□□ -1.46
VPS11-201ENST00000524454 PGAM2P15259 253 aa5.93□□□□□ -1.46
VPS11-201ENST00000524454 AKR1C4P17516 323 aa5.93□□□□□ -1.46
VPS11-201ENST00000524454 TNFSF4P23510 183 aa5.93□□□□□ -1.46
VPS11-201ENST00000524454 VAMP1P23763 118 aa5.93□□□□□ -1.46
VPS11-201ENST00000524454 RBMXP38159 391 aaKnown RBP5.93□□□□□ -1.46
VPS11-201ENST00000524454 OR2F1Q13607 317 aa5.93□□□□□ -1.46
VPS11-201ENST00000524454 PAN3Q58A45 887 aaKnown RBP5.93□□□□□ -1.46
VPS11-201ENST00000524454 DMRTC1Q5HYR2 192 aa5.93□□□□□ -1.46
VPS11-201ENST00000524454 WDR82Q6UXN9 313 aa5.93□□□□□ -1.46
VPS11-201ENST00000524454 GSG1LQ6UXU4 331 aa5.93□□□□□ -1.46
VPS11-201ENST00000524454 ACP7Q6ZNF0 438 aa5.93□□□□□ -1.46
VPS11-201ENST00000524454 Q6ZR03 302 aa5.93□□□□□ -1.46
VPS11-201ENST00000524454 RTN4RL2Q86UN3 420 aa5.93□□□□□ -1.46
VPS11-201ENST00000524454 LDLRAD3Q86YD5 345 aa5.93□□□□□ -1.46
VPS11-201ENST00000524454 TCTEX1D1Q8N7M0 179 aa5.93□□□□□ -1.46
VPS11-201ENST00000524454 OR11H4Q8NGC9 324 aa5.93□□□□□ -1.46
VPS11-201ENST00000524454 PPP1R35Q8TAP8 253 aa5.93□□□□□ -1.46
VPS11-201ENST00000524454 MRPL30Q8TCC3 161 aaKnown RBP5.93□□□□□ -1.46
VPS11-201ENST00000524454 MRPL24Q96A35 216 aaKnown RBP5.93□□□□□ -1.46
VPS11-201ENST00000524454 ABHD14BQ96IU4 210 aa5.93□□□□□ -1.46
VPS11-201ENST00000524454 KIRREL1Q96J84 757 aa5.93□□□□□ -1.46
VPS11-201ENST00000524454 AKR1E2Q96JD6 320 aa5.93□□□□□ -1.46
VPS11-201ENST00000524454 FXYD6Q9H0Q3 95 aa5.93□□□□□ -1.46
VPS11-201ENST00000524454 NAA60Q9H7X0 242 aa5.93□□□□□ -1.46
VPS11-201ENST00000524454 BEX1Q9HBH7 125 aa5.93□□□□□ -1.46
VPS11-201ENST00000524454 TMEM165Q9HC07 324 aa5.93□□□□□ -1.46
VPS11-201ENST00000524454 FAM212BQ9NTI7 297 aaPredicted RBP5.93□□□□□ -1.46
VPS11-201ENST00000524454 TAAR3PQ9P1P4 343 aa5.93□□□□□ -1.46
VPS11-201ENST00000524454 ROS1P08922 2347 aa5.93□□□□□ -1.46
VPS11-201ENST00000524454 TEP1Q99973 2627 aaKnown RBP5.93□□□□□ -1.46
VPS11-201ENST00000524454 CR1P17927 2039 aa5.92□□□□□ -1.46
VPS11-201ENST00000524454 TMEM30CPA0ZSE6 113 aa5.92□□□□□ -1.46
VPS11-201ENST00000524454 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.92□□□□□ -1.46
VPS11-201ENST00000524454 OVOL3O00110 214 aa5.92□□□□□ -1.46
VPS11-201ENST00000524454 SDCBPO00560 298 aaPredicted RBP5.92□□□□□ -1.46
VPS11-201ENST00000524454 CDIPTO14735 213 aa5.92□□□□□ -1.46
VPS11-201ENST00000524454 RHBDL1O75783 438 aa5.92□□□□□ -1.46
VPS11-201ENST00000524454 FSTL3O95633 263 aa5.92□□□□□ -1.46
VPS11-201ENST00000524454 OR2H2O95918 312 aa5.92□□□□□ -1.46
VPS11-201ENST00000524454 HAND1O96004 215 aa5.92□□□□□ -1.46
VPS11-201ENST00000524454 IFNA21P01568 189 aa5.92□□□□□ -1.46
VPS11-201ENST00000524454 ZNF44P15621 663 aa5.92□□□□□ -1.46
VPS11-201ENST00000524454 S100A11P31949 105 aa5.92□□□□□ -1.46
VPS11-201ENST00000524454 FCGR2CP31995 323 aa5.92□□□□□ -1.46
VPS11-201ENST00000524454 ERVS71-1P61550 626 aa5.92□□□□□ -1.46
VPS11-201ENST00000524454 HMGN3Q15651 99 aa5.92□□□□□ -1.46
VPS11-201ENST00000524454 CR1LQ2VPA4 569 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms