RNA–Protein interactions for RNA: ENST00000524288.1

SKP1-213, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-213ENST00000524288 VKORC1L1Q8N0U8 176 aa3.75□□□□□ -1.81
SKP1-213ENST00000524288 SPERTQ8NA61 448 aa3.75□□□□□ -1.81
SKP1-213ENST00000524288 CLHC1Q8NHS4 586 aa3.75□□□□□ -1.81
SKP1-213ENST00000524288 SUN5Q8TC36 379 aa3.75□□□□□ -1.81
SKP1-213ENST00000524288 PHOSPHO2Q8TCD6 241 aa3.75□□□□□ -1.81
SKP1-213ENST00000524288 ISOC2Q96AB3 205 aa3.75□□□□□ -1.81
SKP1-213ENST00000524288 WDR34Q96EX3 536 aa3.75□□□□□ -1.81
SKP1-213ENST00000524288 CEP19Q96LK0 163 aa3.75□□□□□ -1.81
SKP1-213ENST00000524288 NIPSNAP1Q9BPW8 284 aa3.75□□□□□ -1.81
SKP1-213ENST00000524288 MARVELD1Q9BSK0 173 aa3.75□□□□□ -1.81
SKP1-213ENST00000524288 LINC00597Q9H2U6 94 aa3.75□□□□□ -1.81
SKP1-213ENST00000524288 PRSS16Q9NQE7 514 aa3.75□□□□□ -1.81
SKP1-213ENST00000524288 ACER3Q9NUN7 267 aa3.75□□□□□ -1.81
SKP1-213ENST00000524288 RBFOX1Q9NWB1 397 aaKnown RBP3.75□□□□□ -1.81
SKP1-213ENST00000524288 MS4A12Q9NXJ0 267 aa3.75□□□□□ -1.81
SKP1-213ENST00000524288 PAQR5Q9NXK6 330 aaPredicted RBP3.75□□□□□ -1.81
SKP1-213ENST00000524288 STMN3Q9NZ72 180 aa3.75□□□□□ -1.81
SKP1-213ENST00000524288 ZMAT5Q9UDW3 170 aaKnown RBP3.75□□□□□ -1.81
SKP1-213ENST00000524288 PPIL1Q9Y3C6 166 aa3.75□□□□□ -1.81
SKP1-213ENST00000524288 OR51B4Q9Y5P0 310 aa3.75□□□□□ -1.81
SKP1-213ENST00000524288 MDC1Q14676 2089 aaKnown RBP3.75□□□□□ -1.81
SKP1-213ENST00000524288 LTBP2Q14767 1821 aa3.74□□□□□ -1.81
SKP1-213ENST00000524288 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.74□□□□□ -1.81
SKP1-213ENST00000524288 IGHV5-51A0A0C4DH38 117 aa3.74□□□□□ -1.81
SKP1-213ENST00000524288 C7orf66A4D0T2 115 aa3.74□□□□□ -1.81
SKP1-213ENST00000524288 IQCF5A8MTL0 148 aa3.74□□□□□ -1.81
SKP1-213ENST00000524288 FAAHO00519 579 aa3.74□□□□□ -1.81
SKP1-213ENST00000524288 BET1O15155 118 aa3.74□□□□□ -1.81
SKP1-213ENST00000524288 PLA2G10O15496 165 aa3.74□□□□□ -1.81
SKP1-213ENST00000524288 HSBP1O75506 76 aa3.74□□□□□ -1.81
SKP1-213ENST00000524288 SLC25A14O95258 325 aaPredicted RBP3.74□□□□□ -1.81
SKP1-213ENST00000524288 FARS2O95363 451 aaKnown RBP3.74□□□□□ -1.81
SKP1-213ENST00000524288 IFNA14P01570 189 aa3.74□□□□□ -1.81
SKP1-213ENST00000524288 OR4Q2P0C623 313 aa3.74□□□□□ -1.81
SKP1-213ENST00000524288 ERGP11308 486 aa3.74□□□□□ -1.81
SKP1-213ENST00000524288 GABRG2P18507 467 aa3.74□□□□□ -1.81
SKP1-213ENST00000524288 USF1P22415 310 aaPredicted RBP3.74□□□□□ -1.81
SKP1-213ENST00000524288 GABRR2P28476 465 aa3.74□□□□□ -1.81
SKP1-213ENST00000524288 P2RX1P51575 399 aa3.74□□□□□ -1.81
SKP1-213ENST00000524288 UBE2NP61088 152 aaKnown RBP3.74□□□□□ -1.81
SKP1-213ENST00000524288 RPS23P62266 143 aaKnown RBP3.74□□□□□ -1.81
SKP1-213ENST00000524288 LCN2P80188 198 aa3.74□□□□□ -1.81
SKP1-213ENST00000524288 BAMBIQ13145 260 aa3.74□□□□□ -1.81
SKP1-213ENST00000524288 QPRTQ15274 297 aa3.74□□□□□ -1.81
SKP1-213ENST00000524288 ANGPT1Q15389 498 aa3.74□□□□□ -1.81
SKP1-213ENST00000524288 SMUG1Q53HV7 270 aa3.74□□□□□ -1.81
SKP1-213ENST00000524288 HACD4Q5VWC8 232 aa3.74□□□□□ -1.81
SKP1-213ENST00000524288 LAMTOR1Q6IAA8 161 aa3.74□□□□□ -1.81
SKP1-213ENST00000524288 GALNT10Q86SR1 603 aa3.74□□□□□ -1.81
SKP1-213ENST00000524288 SLC51BQ86UW2 128 aa3.74□□□□□ -1.81
SKP1-213ENST00000524288 CLECL1Q8IZS7 167 aa3.74□□□□□ -1.81
SKP1-213ENST00000524288 LINC00471Q8N535 108 aa3.74□□□□□ -1.81
SKP1-213ENST00000524288 OR4M1Q8NGD0 313 aa3.74□□□□□ -1.81
SKP1-213ENST00000524288 OR5AR1Q8NGP9 310 aa3.74□□□□□ -1.81
SKP1-213ENST00000524288 OR9Q1Q8NGQ5 310 aa3.74□□□□□ -1.81
SKP1-213ENST00000524288 ZNF596Q8TC21 504 aa3.74□□□□□ -1.81
SKP1-213ENST00000524288 AP3S1Q92572 193 aa3.74□□□□□ -1.81
SKP1-213ENST00000524288 RAB1CQ92928 201 aa3.74□□□□□ -1.81
SKP1-213ENST00000524288 HGDQ93099 445 aa3.74□□□□□ -1.81
SKP1-213ENST00000524288 NMNAT1Q9HAN9 279 aaPredicted RBP3.74□□□□□ -1.81
SKP1-213ENST00000524288 WFDC1Q9HC57 220 aa3.74□□□□□ -1.81
SKP1-213ENST00000524288 MCUBQ9NWR8 336 aa3.74□□□□□ -1.81
SKP1-213ENST00000524288 TXNL4BQ9NX01 149 aaKnown RBP3.74□□□□□ -1.81
SKP1-213ENST00000524288 ZNF222Q9UK12 451 aa3.74□□□□□ -1.81
SKP1-213ENST00000524288 SSR3Q9UNL2 185 aa3.74□□□□□ -1.81
SKP1-213ENST00000524288 ANGPT4Q9Y264 503 aa3.74□□□□□ -1.81
SKP1-213ENST00000524288 NACAE9PAV3 2078 aa3.74□□□□□ -1.81
SKP1-213ENST00000524288 TRDV1A0A1B0GX56 115 aa3.73□□□□□ -1.81
SKP1-213ENST00000524288 SLC19A2O60779 497 aa3.73□□□□□ -1.81
SKP1-213ENST00000524288 MPDU1O75352 247 aa3.73□□□□□ -1.81
SKP1-213ENST00000524288 ENTPD6O75354 484 aa3.73□□□□□ -1.81
SKP1-213ENST00000524288 PSIP1O75475 530 aaKnown RBP3.73□□□□□ -1.81
SKP1-213ENST00000524288 GADD45GO95257 159 aa3.73□□□□□ -1.81
SKP1-213ENST00000524288 RAB36O95755 333 aa3.73□□□□□ -1.81
SKP1-213ENST00000524288 TGM6O95932 706 aa3.73□□□□□ -1.81
SKP1-213ENST00000524288 C1QCP02747 245 aa3.73□□□□□ -1.81
SKP1-213ENST00000524288 CD37P11049 281 aa3.73□□□□□ -1.81
SKP1-213ENST00000524288 PSMA1P25786 263 aaKnown RBP3.73□□□□□ -1.81
SKP1-213ENST00000524288 SDC2P34741 201 aa3.73□□□□□ -1.81
SKP1-213ENST00000524288 HTR2BP41595 481 aa3.73□□□□□ -1.81
SKP1-213ENST00000524288 IDH2P48735 452 aaKnown RBP3.73□□□□□ -1.81
SKP1-213ENST00000524288 SMIM11AP58511 58 aa3.73□□□□□ -1.81
SKP1-213ENST00000524288 PFN3P60673 137 aa3.73□□□□□ -1.81
SKP1-213ENST00000524288 RHOAP61586 193 aa3.73□□□□□ -1.81
SKP1-213ENST00000524288 RRAS2P62070 204 aaPredicted RBP3.73□□□□□ -1.81
SKP1-213ENST00000524288 RPS24P62847 133 aaKnown RBP3.73□□□□□ -1.81
SKP1-213ENST00000524288 CACNG7P62955 275 aa3.73□□□□□ -1.81
SKP1-213ENST00000524288 C1DQ13901 141 aaKnown RBP3.73□□□□□ -1.81
SKP1-213ENST00000524288 PTGES3Q15185 160 aaKnown RBP3.73□□□□□ -1.81
SKP1-213ENST00000524288 GCSAMLQ5JQS6 135 aa3.73□□□□□ -1.81
SKP1-213ENST00000524288 CPTPQ5TA50 214 aa3.73□□□□□ -1.81
SKP1-213ENST00000524288 SDHAF4Q5VUM1 108 aa3.73□□□□□ -1.81
SKP1-213ENST00000524288 FAM71E1Q6IPT2 247 aa3.73□□□□□ -1.81
SKP1-213ENST00000524288 FAM151BQ6UXP7 276 aa3.73□□□□□ -1.81
SKP1-213ENST00000524288 MRPL21Q7Z2W9 205 aaKnown RBP3.73□□□□□ -1.81
SKP1-213ENST00000524288 BBS7Q8IWZ6 715 aa3.73□□□□□ -1.81
SKP1-213ENST00000524288 C9orf62Q8N4C0 152 aa3.73□□□□□ -1.81
SKP1-213ENST00000524288 NATD1Q8N6N6 113 aa3.73□□□□□ -1.81
SKP1-213ENST00000524288 YIPF7Q8N8F6 280 aa3.73□□□□□ -1.81
SKP1-213ENST00000524288 OR5T3Q8NGG3 340 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms