RNA–Protein interactions for RNA: ENST00000523488.5

CSMD1-213, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 3,714 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-213ENST00000523488 SERF2P84101 59 aa7.21□□□□□ -1.25
CSMD1-213ENST00000523488 ZNF154Q13106 437 aa7.21□□□□□ -1.25
CSMD1-213ENST00000523488 KIR2DS3Q14952 304 aa7.21□□□□□ -1.25
CSMD1-213ENST00000523488 VWA1Q6PCB0 445 aa7.21□□□□□ -1.25
CSMD1-213ENST00000523488 WDFY1Q8IWB7 410 aa7.21□□□□□ -1.25
CSMD1-213ENST00000523488 SIGLECL1Q8N7X8 197 aa7.21□□□□□ -1.25
CSMD1-213ENST00000523488 STPG4Q8N801 248 aa7.21□□□□□ -1.25
CSMD1-213ENST00000523488 ZIC4Q8N9L1 334 aa7.21□□□□□ -1.25
CSMD1-213ENST00000523488 OR4B1Q8NGF8 309 aa7.21□□□□□ -1.25
CSMD1-213ENST00000523488 MBD6Q96DN6 1003 aa7.21□□□□□ -1.25
CSMD1-213ENST00000523488 STARD4Q96DR4 205 aa7.21□□□□□ -1.25
CSMD1-213ENST00000523488 ZNF286AQ9HBT8 521 aa7.21□□□□□ -1.25
CSMD1-213ENST00000523488 NECAP2Q9NVZ3 263 aa7.21□□□□□ -1.25
CSMD1-213ENST00000523488 ZNF586Q9NXT0 402 aa7.21□□□□□ -1.25
CSMD1-213ENST00000523488 A0A0C4DFX4 3053 aa7.21□□□□□ -1.26
CSMD1-213ENST00000523488 RTTNQ86VV8 2226 aa7.21□□□□□ -1.26
CSMD1-213ENST00000523488 NKX2-6A6NCS4 301 aa7.21□□□□□ -1.26
CSMD1-213ENST00000523488 RNF212BA8MTL3 300 aa7.21□□□□□ -1.26
CSMD1-213ENST00000523488 NPIPA5E9PKD4 350 aa7.21□□□□□ -1.26
CSMD1-213ENST00000523488 FCN1O00602 326 aa7.21□□□□□ -1.26
CSMD1-213ENST00000523488 ZNF737O75373 536 aa7.21□□□□□ -1.26
CSMD1-213ENST00000523488 PSMB3P49720 205 aa7.21□□□□□ -1.26
CSMD1-213ENST00000523488 MESP2Q0VG99 397 aa7.21□□□□□ -1.26
CSMD1-213ENST00000523488 LYG1Q8N1E2 194 aa7.21□□□□□ -1.26
CSMD1-213ENST00000523488 ZNF596Q8TC21 504 aa7.21□□□□□ -1.26
CSMD1-213ENST00000523488 WDYHV1Q96HA8 205 aa7.21□□□□□ -1.26
CSMD1-213ENST00000523488 PGAM5Q96HS1 289 aa7.21□□□□□ -1.26
CSMD1-213ENST00000523488 ELOVL5Q9NYP7 299 aa7.21□□□□□ -1.26
CSMD1-213ENST00000523488 NPIPA1Q9UND3 350 aa7.21□□□□□ -1.26
CSMD1-213ENST00000523488 ASXL3Q9C0F0 2248 aa7.21□□□□□ -1.26
CSMD1-213ENST00000523488 A0A1B0GUS0 222 aa7.21□□□□□ -1.26
CSMD1-213ENST00000523488 LRRC3CA6NJW4 275 aa7.21□□□□□ -1.26
CSMD1-213ENST00000523488 PRKNO60260 465 aaPredicted RBP7.21□□□□□ -1.26
CSMD1-213ENST00000523488 TMEM50AO95807 157 aa7.21□□□□□ -1.26
CSMD1-213ENST00000523488 CCR5P51681 352 aa7.21□□□□□ -1.26
CSMD1-213ENST00000523488 SPATA45Q537H7 98 aa7.21□□□□□ -1.26
CSMD1-213ENST00000523488 FBLN7Q53RD9 439 aa7.21□□□□□ -1.26
CSMD1-213ENST00000523488 SLC25A53Q5H9E4 307 aa7.21□□□□□ -1.26
CSMD1-213ENST00000523488 UNQ5815/PRO19632Q6UWF5 114 aa7.21□□□□□ -1.26
CSMD1-213ENST00000523488 CHRDL2Q6WN34 429 aa7.21□□□□□ -1.26
CSMD1-213ENST00000523488 RNF144BQ7Z419 303 aa7.21□□□□□ -1.26
CSMD1-213ENST00000523488 KMT5CQ86Y97 462 aa7.21□□□□□ -1.26
CSMD1-213ENST00000523488 OR4F5Q8NH21 305 aa7.21□□□□□ -1.26
CSMD1-213ENST00000523488 VWCEQ96DN2 955 aa7.21□□□□□ -1.26
CSMD1-213ENST00000523488 OR4F4Q96R69 305 aa7.21□□□□□ -1.26
CSMD1-213ENST00000523488 SLC46A2Q9BY10 475 aa7.21□□□□□ -1.26
CSMD1-213ENST00000523488 CHRNA10Q9GZZ6 450 aa7.21□□□□□ -1.26
CSMD1-213ENST00000523488 STARD5Q9NSY2 213 aa7.21□□□□□ -1.26
CSMD1-213ENST00000523488 CDC42EP3Q9UKI2 254 aa7.21□□□□□ -1.26
CSMD1-213ENST00000523488 NCOR1O75376 2440 aa7.2□□□□□ -1.26
CSMD1-213ENST00000523488 GRIFINA4D1Z8 144 aa7.2□□□□□ -1.26
CSMD1-213ENST00000523488 A6NJY4 79 aa7.2□□□□□ -1.26
CSMD1-213ENST00000523488 AQP7P3A6NL99 342 aa7.2□□□□□ -1.26
CSMD1-213ENST00000523488 H3BP45 60 aa7.2□□□□□ -1.26
CSMD1-213ENST00000523488 M0QZ24 198 aa7.2□□□□□ -1.26
CSMD1-213ENST00000523488 PPP1CBP62140 327 aa7.2□□□□□ -1.26
CSMD1-213ENST00000523488 MSMO1Q15800 293 aa7.2□□□□□ -1.26
CSMD1-213ENST00000523488 LDLRAD2Q5SZI1 272 aa7.2□□□□□ -1.26
CSMD1-213ENST00000523488 C1orf185Q5T7R7 199 aa7.2□□□□□ -1.26
CSMD1-213ENST00000523488 C6orf201Q7Z4U5 140 aa7.2□□□□□ -1.26
CSMD1-213ENST00000523488 SLC39A11Q8N1S5 342 aa7.2□□□□□ -1.26
CSMD1-213ENST00000523488 KLHDC1Q8N7A1 406 aa7.2□□□□□ -1.26
CSMD1-213ENST00000523488 ZNF441Q8N8Z8 693 aa7.2□□□□□ -1.26
CSMD1-213ENST00000523488 ZNF784Q8NCA9 323 aaPredicted RBP7.2□□□□□ -1.26
CSMD1-213ENST00000523488 OR4F17Q8NGA8 305 aa7.2□□□□□ -1.26
CSMD1-213ENST00000523488 TMEM222Q9H0R3 208 aa7.2□□□□□ -1.26
CSMD1-213ENST00000523488 RPRMQ9NS64 109 aa7.2□□□□□ -1.26
CSMD1-213ENST00000523488 ANXA10Q9UJ72 324 aa7.2□□□□□ -1.26
CSMD1-213ENST00000523488 MCTS1Q9ULC4 181 aaKnown RBP7.2□□□□□ -1.26
CSMD1-213ENST00000523488 HCFC2Q9Y5Z7 792 aa7.2□□□□□ -1.26
CSMD1-213ENST00000523488 LY96Q9Y6Y9 160 aa7.2□□□□□ -1.26
CSMD1-213ENST00000523488 PCDH15Q96QU1 1955 aa7.2□□□□□ -1.26
CSMD1-213ENST00000523488 DOCK11Q5JSL3 2073 aa7.2□□□□□ -1.26
CSMD1-213ENST00000523488 IGHV2OR16-5A0A0B4J2B6 119 aa7.2□□□□□ -1.26
CSMD1-213ENST00000523488 C9orf172C9J069 976 aa7.2□□□□□ -1.26
CSMD1-213ENST00000523488 DIRC3C9JPN6 131 aa7.2□□□□□ -1.26
CSMD1-213ENST00000523488 TUSC2O75896 110 aa7.2□□□□□ -1.26
CSMD1-213ENST00000523488 UEVLDQ8IX04 471 aa7.2□□□□□ -1.26
CSMD1-213ENST00000523488 PNKDQ8N490 385 aa7.2□□□□□ -1.26
CSMD1-213ENST00000523488 FAM3CQ92520 227 aa7.2□□□□□ -1.26
CSMD1-213ENST00000523488 SLAMF6Q96DU3 332 aa7.2□□□□□ -1.26
CSMD1-213ENST00000523488 COX11Q9Y6N1 276 aa7.2□□□□□ -1.26
CSMD1-213ENST00000523488 CEP250Q9BV73 2442 aa7.19□□□□□ -1.26
CSMD1-213ENST00000523488 IGHV2-26A0A0B4J1V2 119 aa7.19□□□□□ -1.26
CSMD1-213ENST00000523488 LOC102725191A0A1B0GVB3 256 aa7.19□□□□□ -1.26
CSMD1-213ENST00000523488 TMEM238C9JI98 176 aa7.19□□□□□ -1.26
CSMD1-213ENST00000523488 K7ERU9 68 aa7.19□□□□□ -1.26
CSMD1-213ENST00000523488 CEACAM5P06731 702 aa7.19□□□□□ -1.26
CSMD1-213ENST00000523488 GP1BBP13224 206 aa7.19□□□□□ -1.26
CSMD1-213ENST00000523488 GCH1P30793 250 aa7.19□□□□□ -1.26
CSMD1-213ENST00000523488 CCR2P41597 374 aa7.19□□□□□ -1.26
CSMD1-213ENST00000523488 HNRNPA1L2Q32P51 320 aaKnown RBP7.19□□□□□ -1.26
CSMD1-213ENST00000523488 PRSS41Q7RTY9 318 aa7.19□□□□□ -1.26
CSMD1-213ENST00000523488 MYPOPQ86VE0 399 aaPredicted RBP7.19□□□□□ -1.26
CSMD1-213ENST00000523488 CALHM1Q8IU99 346 aa7.19□□□□□ -1.26
CSMD1-213ENST00000523488 OR5B3Q8NH48 314 aa7.19□□□□□ -1.26
CSMD1-213ENST00000523488 GMPPAQ96IJ6 420 aaPredicted RBP7.19□□□□□ -1.26
CSMD1-213ENST00000523488 DGAT2Q96PD7 388 aa7.19□□□□□ -1.26
CSMD1-213ENST00000523488 UHRF2Q96PU4 802 aa7.19□□□□□ -1.26
CSMD1-213ENST00000523488 CSTL1Q9H114 145 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms