RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 RSU1Q15404 277 aa8.9□□□□□ -0.98
SDCBP-211ENST00000523441 KISS1Q15726 138 aa8.9□□□□□ -0.98
SDCBP-211ENST00000523441 ATAD3CQ5T2N8 411 aa8.9□□□□□ -0.98
SDCBP-211ENST00000523441 AADACL4Q5VUY2 407 aa8.9□□□□□ -0.98
SDCBP-211ENST00000523441 RNLSQ5VYX0 342 aa8.9□□□□□ -0.98
SDCBP-211ENST00000523441 NXNL2Q5VZ03 156 aa8.9□□□□□ -0.98
SDCBP-211ENST00000523441 SLC16A12Q6ZSM3 486 aa8.9□□□□□ -0.98
SDCBP-211ENST00000523441 ADGRG5Q8IZF4 528 aa8.9□□□□□ -0.98
SDCBP-211ENST00000523441 OR10A7Q8NGE5 316 aa8.9□□□□□ -0.98
SDCBP-211ENST00000523441 OR2G2Q8NGZ5 317 aa8.9□□□□□ -0.98
SDCBP-211ENST00000523441 TNFAIP8L1Q8WVP5 186 aa8.9□□□□□ -0.98
SDCBP-211ENST00000523441 CANT1Q8WVQ1 401 aa8.9□□□□□ -0.98
SDCBP-211ENST00000523441 FLYWCH2Q96CP2 140 aaKnown RBP8.9□□□□□ -0.98
SDCBP-211ENST00000523441 CLCC1Q96S66 551 aa8.9□□□□□ -0.98
SDCBP-211ENST00000523441 FAM103A1Q9BTL3 118 aaKnown RBP8.9□□□□□ -0.98
SDCBP-211ENST00000523441 PRRG3Q9BZD7 231 aa8.9□□□□□ -0.98
SDCBP-211ENST00000523441 HIPK2Q9H2X6 1198 aa8.9□□□□□ -0.98
SDCBP-211ENST00000523441 LINC00574Q9H8X3 128 aa8.9□□□□□ -0.98
SDCBP-211ENST00000523441 ZNF355PQ9NSJ1 428 aa8.9□□□□□ -0.98
SDCBP-211ENST00000523441 CHCHD3Q9NX63 227 aaKnown RBP8.9□□□□□ -0.98
SDCBP-211ENST00000523441 CEPT1Q9Y6K0 416 aa8.9□□□□□ -0.98
SDCBP-211ENST00000523441 TMEM30CPA0ZSE6 113 aa8.89□□□□□ -0.99
SDCBP-211ENST00000523441 NBR2O15453 112 aa8.89□□□□□ -0.99
SDCBP-211ENST00000523441 OR7C1O76099 320 aaPredicted RBP8.89□□□□□ -0.99
SDCBP-211ENST00000523441 OR2T7P0C7T2 308 aa8.89□□□□□ -0.99
SDCBP-211ENST00000523441 DBTP11182 482 aaKnown RBP8.89□□□□□ -0.99
SDCBP-211ENST00000523441 EPHA2P29317 976 aa8.89□□□□□ -0.99
SDCBP-211ENST00000523441 ZNF134P52741 427 aa8.89□□□□□ -0.99
SDCBP-211ENST00000523441 NANOS3P60323 173 aaKnown RBP8.89□□□□□ -0.99
SDCBP-211ENST00000523441 LSAMPQ13449 338 aa8.89□□□□□ -0.99
SDCBP-211ENST00000523441 ZNF691Q5VV52 312 aa8.89□□□□□ -0.99
SDCBP-211ENST00000523441 LIN54Q6MZP7 749 aa8.89□□□□□ -0.99
SDCBP-211ENST00000523441 SLC25A48Q6ZT89 311 aaKnown RBP8.89□□□□□ -0.99
SDCBP-211ENST00000523441 GID4Q8IVV7 300 aa8.89□□□□□ -0.99
SDCBP-211ENST00000523441 SAXO1Q8IYX7 474 aa8.89□□□□□ -0.99
SDCBP-211ENST00000523441 KCTD12Q96CX2 325 aaKnown RBP8.89□□□□□ -0.99
SDCBP-211ENST00000523441 ST6GALNAC5Q9BVH7 336 aa8.89□□□□□ -0.99
SDCBP-211ENST00000523441 TPSG1Q9NRR2 321 aa8.89□□□□□ -0.99
SDCBP-211ENST00000523441 FRRS1LQ9P0K9 344 aa8.89□□□□□ -0.99
SDCBP-211ENST00000523441 FOXA2Q9Y261 457 aaPredicted RBP8.89□□□□□ -0.99
SDCBP-211ENST00000523441 ERGIC3Q9Y282 383 aa8.89□□□□□ -0.99
SDCBP-211ENST00000523441 IZUMO1RA6ND01 250 aa8.88□□□□□ -0.99
SDCBP-211ENST00000523441 FAM90A10PA6NDY2 464 aa8.88□□□□□ -0.99
SDCBP-211ENST00000523441 C15orf65H3BRN8 121 aa8.88□□□□□ -0.99
SDCBP-211ENST00000523441 TXNL1O43396 289 aa8.88□□□□□ -0.99
SDCBP-211ENST00000523441 DEDDO75618 318 aa8.88□□□□□ -0.99
SDCBP-211ENST00000523441 SULT1C4O75897 302 aa8.88□□□□□ -0.99
SDCBP-211ENST00000523441 CDRT1O95170 752 aa8.88□□□□□ -0.99
SDCBP-211ENST00000523441 HLA-DRB1P01911 266 aa8.88□□□□□ -0.99
SDCBP-211ENST00000523441 HTR1AP08908 422 aa8.88□□□□□ -0.99
SDCBP-211ENST00000523441 GZMHP20718 246 aa8.88□□□□□ -0.99
SDCBP-211ENST00000523441 DAPP51397 102 aa8.88□□□□□ -0.99
SDCBP-211ENST00000523441 DEFA5Q01523 94 aa8.88□□□□□ -0.99
SDCBP-211ENST00000523441 ZNF85Q03923 595 aa8.88□□□□□ -0.99
SDCBP-211ENST00000523441 GK3PQ14409 553 aa8.88□□□□□ -0.99
SDCBP-211ENST00000523441 C5orf64Q2M2E5 130 aa8.88□□□□□ -0.99
SDCBP-211ENST00000523441 SPATS1Q496A3 300 aa8.88□□□□□ -0.99
SDCBP-211ENST00000523441 CT45A1Q5HYN5 189 aa8.88□□□□□ -0.99
SDCBP-211ENST00000523441 FAHD1Q6P587 224 aa8.88□□□□□ -0.99
SDCBP-211ENST00000523441 UNQ5815/PRO19632Q6UWF5 114 aa8.88□□□□□ -0.99
SDCBP-211ENST00000523441 LINC00311Q8N616 119 aa8.88□□□□□ -0.99
SDCBP-211ENST00000523441 MINDY2Q8NBR6 621 aa8.88□□□□□ -0.99
SDCBP-211ENST00000523441 OR1L1Q8NH94 360 aa8.88□□□□□ -0.99
SDCBP-211ENST00000523441 CT45A3Q8NHU0 189 aa8.88□□□□□ -0.99
SDCBP-211ENST00000523441 MRPL20Q9BYC9 149 aaKnown RBP8.88□□□□□ -0.99
SDCBP-211ENST00000523441 WFDC10AQ9H1F0 79 aa8.88□□□□□ -0.99
SDCBP-211ENST00000523441 FBXL15Q9H469 300 aa8.88□□□□□ -0.99
SDCBP-211ENST00000523441 ADAM30Q9UKF2 790 aa8.88□□□□□ -0.99
SDCBP-211ENST00000523441 ING4Q9UNL4 249 aa8.88□□□□□ -0.99
SDCBP-211ENST00000523441 AIPO00170 330 aa8.87□□□□□ -0.99
SDCBP-211ENST00000523441 GABRPO00591 440 aa8.87□□□□□ -0.99
SDCBP-211ENST00000523441 RGS11O94810 467 aa8.87□□□□□ -0.99
SDCBP-211ENST00000523441 FAM107AO95990 144 aa8.87□□□□□ -0.99
SDCBP-211ENST00000523441 TRGV3P03979 118 aa8.87□□□□□ -0.99
SDCBP-211ENST00000523441 VHLP40337 213 aa8.87□□□□□ -0.99
SDCBP-211ENST00000523441 SYNJ2BPP57105 145 aa8.87□□□□□ -0.99
SDCBP-211ENST00000523441 CD81P60033 236 aa8.87□□□□□ -0.99
SDCBP-211ENST00000523441 ACTBL2Q562R1 376 aa8.87□□□□□ -0.99
SDCBP-211ENST00000523441 C5orf24Q7Z6I8 188 aa8.87□□□□□ -0.99
SDCBP-211ENST00000523441 SPATA24Q86W54 205 aa8.87□□□□□ -0.99
SDCBP-211ENST00000523441 DEFB125Q8N687 156 aa8.87□□□□□ -0.99
SDCBP-211ENST00000523441 OR4K15Q8NH41 348 aa8.87□□□□□ -0.99
SDCBP-211ENST00000523441 TSEN15Q8WW01 171 aaKnown RBP8.87□□□□□ -0.99
SDCBP-211ENST00000523441 NABP2Q9BQ15 211 aa8.87□□□□□ -0.99
SDCBP-211ENST00000523441 RHOFQ9HBH0 211 aa8.87□□□□□ -0.99
SDCBP-211ENST00000523441 WARS2Q9UGM6 360 aaKnown RBP8.87□□□□□ -0.99
SDCBP-211ENST00000523441 ZNF580Q9UK33 172 aa8.87□□□□□ -0.99
SDCBP-211ENST00000523441 TRAPPC2LQ9UL33 140 aa8.87□□□□□ -0.99
SDCBP-211ENST00000523441 GAB2Q9UQC2 676 aa8.87□□□□□ -0.99
SDCBP-211ENST00000523441 ST3GAL6Q9Y274 331 aa8.87□□□□□ -0.99
SDCBP-211ENST00000523441 SELENOKQ9Y6D0 94 aa8.87□□□□□ -0.99
SDCBP-211ENST00000523441 H0Y980 276 aa8.86□□□□□ -0.99
SDCBP-211ENST00000523441 J3QLW9 94 aa8.86□□□□□ -0.99
SDCBP-211ENST00000523441 FCN1O00602 326 aa8.86□□□□□ -0.99
SDCBP-211ENST00000523441 GEMIN2O14893 280 aaKnown RBP8.86□□□□□ -0.99
SDCBP-211ENST00000523441 SULT1B1O43704 296 aa8.86□□□□□ -0.99
SDCBP-211ENST00000523441 SNRPBP14678 240 aaKnown RBP8.86□□□□□ -0.99
SDCBP-211ENST00000523441 ZNF19P17023 458 aa8.86□□□□□ -0.99
SDCBP-211ENST00000523441 SERPINA2P20848 420 aa8.86□□□□□ -0.99
SDCBP-211ENST00000523441 OR3A3P47888 321 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms