RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 PRR18Q8N4B5 295 aa16.4■□□□□ 0.22
SDCBP-209ENST00000522243 TMEM104Q8NE00 496 aa16.4■□□□□ 0.22
SDCBP-209ENST00000522243 RBMXL1Q96E39 390 aaKnown RBP16.4■□□□□ 0.22
SDCBP-209ENST00000522243 MRPS24Q96EL2 167 aaKnown RBP16.4■□□□□ 0.22
SDCBP-209ENST00000522243 SPACA1Q9HBV2 294 aa16.4■□□□□ 0.22
SDCBP-209ENST00000522243 PEX16Q9Y5Y5 336 aa16.4■□□□□ 0.22
SDCBP-209ENST00000522243 C12orf77C9JDV5 145 aa16.39■□□□□ 0.21
SDCBP-209ENST00000522243 FOXB2Q5VYV0 432 aa16.39■□□□□ 0.21
SDCBP-209ENST00000522243 LYPD6Q86Y78 171 aa16.39■□□□□ 0.21
SDCBP-209ENST00000522243 LINC00311Q8N616 119 aa16.39■□□□□ 0.21
SDCBP-209ENST00000522243 WFDC9Q8NEX5 89 aa16.39■□□□□ 0.21
SDCBP-209ENST00000522243 OR10V1Q8NGI7 309 aa16.39■□□□□ 0.21
SDCBP-209ENST00000522243 OR1L1Q8NH94 360 aa16.39■□□□□ 0.21
SDCBP-209ENST00000522243 MRAPQ8TCY5 172 aa16.39■□□□□ 0.21
SDCBP-209ENST00000522243 FAM46BQ96A09 425 aa16.39■□□□□ 0.21
SDCBP-209ENST00000522243 NECAP2Q9NVZ3 263 aa16.39■□□□□ 0.21
SDCBP-209ENST00000522243 FKBP14Q9NWM8 211 aa16.39■□□□□ 0.21
SDCBP-209ENST00000522243 AURKAIP1Q9NWT8 199 aaPredicted RBP16.39■□□□□ 0.21
SDCBP-209ENST00000522243 ERGIC3Q9Y282 383 aa16.39■□□□□ 0.21
SDCBP-209ENST00000522243 TGP01266 2768 aa16.38■□□□□ 0.21
SDCBP-209ENST00000522243 UBE2QL1A1L167 161 aa16.38■□□□□ 0.21
SDCBP-209ENST00000522243 SERPINE3A8MV23 424 aa16.38■□□□□ 0.21
SDCBP-209ENST00000522243 FGF16O43320 207 aa16.38■□□□□ 0.21
SDCBP-209ENST00000522243 CD1AP06126 327 aa16.38■□□□□ 0.21
SDCBP-209ENST00000522243 REC114Q7Z4M0 266 aa16.38■□□□□ 0.21
SDCBP-209ENST00000522243 CDH26Q8IXH8 852 aa16.38■□□□□ 0.21
SDCBP-209ENST00000522243 EAF1Q96JC9 268 aaPredicted RBP16.38■□□□□ 0.21
SDCBP-209ENST00000522243 GNG12Q9UBI6 72 aa16.38■□□□□ 0.21
SDCBP-209ENST00000522243 PRKDCP78527 4128 aaKnown RBP16.38■□□□□ 0.21
SDCBP-209ENST00000522243 LINC01548A6NM66 108 aa16.37■□□□□ 0.21
SDCBP-209ENST00000522243 NCBP2LA6PVI3 153 aaKnown RBP16.37■□□□□ 0.21
SDCBP-209ENST00000522243 PTGES3LE9PB15 166 aa16.37■□□□□ 0.21
SDCBP-209ENST00000522243 SPINT2O43291 252 aa16.37■□□□□ 0.21
SDCBP-209ENST00000522243 HBZP02008 142 aa16.37■□□□□ 0.21
SDCBP-209ENST00000522243 RCC1P18754 421 aaPredicted RBP16.37■□□□□ 0.21
SDCBP-209ENST00000522243 IL3RAP26951 378 aa16.37■□□□□ 0.21
SDCBP-209ENST00000522243 EBI3Q14213 229 aa16.37■□□□□ 0.21
SDCBP-209ENST00000522243 C6orf183Q5T699 404 aa16.37■□□□□ 0.21
SDCBP-209ENST00000522243 FAM27D1Q5T7N8 215 aa16.37■□□□□ 0.21
SDCBP-209ENST00000522243 SIGIRRQ6IA17 410 aa16.37■□□□□ 0.21
SDCBP-209ENST00000522243 C5orf24Q7Z6I8 188 aa16.37■□□□□ 0.21
SDCBP-209ENST00000522243 SLC35E3Q7Z769 313 aa16.37■□□□□ 0.21
SDCBP-209ENST00000522243 NKAIN3Q8N8D7 197 aa16.37■□□□□ 0.21
SDCBP-209ENST00000522243 RTN4IP1Q8WWV3 396 aaPredicted RBP16.37■□□□□ 0.21
SDCBP-209ENST00000522243 TFAP2CQ92754 450 aa16.37■□□□□ 0.21
SDCBP-209ENST00000522243 Q96M66 194 aa16.37■□□□□ 0.21
SDCBP-209ENST00000522243 ZNF736B4DX44 427 aaPredicted RBP16.36■□□□□ 0.21
SDCBP-209ENST00000522243 CDK1P06493 297 aa16.36■□□□□ 0.21
SDCBP-209ENST00000522243 FUT3P21217 361 aa16.36■□□□□ 0.21
SDCBP-209ENST00000522243 MAPK3P27361 379 aaPredicted RBP16.36■□□□□ 0.21
SDCBP-209ENST00000522243 ZNF134P52741 427 aa16.36■□□□□ 0.21
SDCBP-209ENST00000522243 GABPB1Q06547 395 aaPredicted RBP16.36■□□□□ 0.21
SDCBP-209ENST00000522243 ACSM3Q53FZ2 586 aa16.36■□□□□ 0.21
SDCBP-209ENST00000522243 C18orf65Q6ZTR6 163 aa16.36■□□□□ 0.21
SDCBP-209ENST00000522243 C8orf31Q8N9H6 132 aa16.36■□□□□ 0.21
SDCBP-209ENST00000522243 ZNF439Q8NDP4 499 aa16.36■□□□□ 0.21
SDCBP-209ENST00000522243 OR2T10Q8NGZ9 312 aa16.36■□□□□ 0.21
SDCBP-209ENST00000522243 CHPT1Q8WUD6 406 aa16.36■□□□□ 0.21
SDCBP-209ENST00000522243 ST6GALNAC6Q969X2 333 aa16.36■□□□□ 0.21
SDCBP-209ENST00000522243 TMED9Q9BVK6 235 aa16.36■□□□□ 0.21
SDCBP-209ENST00000522243 VCXQ9H320 206 aa16.36■□□□□ 0.21
SDCBP-209ENST00000522243 FAM90A10PA6NDY2 464 aa16.35■□□□□ 0.21
SDCBP-209ENST00000522243 FAM90A7PA6NKC0 464 aa16.35■□□□□ 0.21
SDCBP-209ENST00000522243 FAM90A23PA8MXZ1 464 aa16.35■□□□□ 0.21
SDCBP-209ENST00000522243 MPIG6BO95866 241 aa16.35■□□□□ 0.21
SDCBP-209ENST00000522243 IGHG2P01859 326 aa16.35■□□□□ 0.21
SDCBP-209ENST00000522243 GP2P55259 537 aaKnown RBP16.35■□□□□ 0.21
SDCBP-209ENST00000522243 SLC35A2P78381 396 aa16.35■□□□□ 0.21
SDCBP-209ENST00000522243 GPR50Q13585 617 aa16.35■□□□□ 0.21
SDCBP-209ENST00000522243 CT45A1Q5HYN5 189 aa16.35■□□□□ 0.21
SDCBP-209ENST00000522243 OR10K2Q6IF99 312 aa16.35■□□□□ 0.21
SDCBP-209ENST00000522243 UNQ9370/PRO34162Q6UXP9 181 aa16.35■□□□□ 0.21
SDCBP-209ENST00000522243 SLC25A48Q6ZT89 311 aaKnown RBP16.35■□□□□ 0.21
SDCBP-209ENST00000522243 IZUMO1Q8IYV9 350 aa16.35■□□□□ 0.21
SDCBP-209ENST00000522243 GAPTQ8N292 157 aa16.35■□□□□ 0.21
SDCBP-209ENST00000522243 Q8N6K4 173 aa16.35■□□□□ 0.21
SDCBP-209ENST00000522243 CT45A3Q8NHU0 189 aa16.35■□□□□ 0.21
SDCBP-209ENST00000522243 THRSPQ92748 146 aa16.35■□□□□ 0.21
SDCBP-209ENST00000522243 UQCC2Q9BRT2 126 aa16.35■□□□□ 0.21
SDCBP-209ENST00000522243 TAF9BQ9HBM6 251 aa16.35■□□□□ 0.21
SDCBP-209ENST00000522243 NKX1-2Q9UD57 310 aaPredicted RBP16.35■□□□□ 0.21
SDCBP-209ENST00000522243 SC5DO75845 299 aa16.34■□□□□ 0.21
SDCBP-209ENST00000522243 RPL23AP62750 156 aaKnown RBP16.34■□□□□ 0.21
SDCBP-209ENST00000522243 Q3ZCU0 254 aa16.34■□□□□ 0.21
SDCBP-209ENST00000522243 NKAPLQ5M9Q1 402 aa16.34■□□□□ 0.21
SDCBP-209ENST00000522243 C6orf141Q5SZD1 244 aa16.34■□□□□ 0.21
SDCBP-209ENST00000522243 TGIF2LXQ8IUE1 241 aa16.34■□□□□ 0.21
SDCBP-209ENST00000522243 FOXRED2Q8IWF2 684 aa16.34■□□□□ 0.21
SDCBP-209ENST00000522243 STPG2Q8N412 459 aa16.34■□□□□ 0.21
SDCBP-209ENST00000522243 Q8N9W7 124 aa16.34■□□□□ 0.21
SDCBP-209ENST00000522243 MND1Q9BWT6 205 aa16.34■□□□□ 0.21
SDCBP-209ENST00000522243 RAB9BQ9NP90 201 aa16.34■□□□□ 0.21
SDCBP-209ENST00000522243 NOTCH3Q9UM47 2321 aa16.34■□□□□ 0.21
SDCBP-209ENST00000522243 H0YHG0 523 aa16.33■□□□□ 0.2
SDCBP-209ENST00000522243 PDCD6O75340 191 aa16.33■□□□□ 0.2
SDCBP-209ENST00000522243 CD1BP29016 333 aa16.33■□□□□ 0.2
SDCBP-209ENST00000522243 GNMTQ14749 295 aa16.33■□□□□ 0.2
SDCBP-209ENST00000522243 RBM48Q5RL73 367 aaKnown RBP16.33■□□□□ 0.2
SDCBP-209ENST00000522243 OR52L2PQ8NGH6 319 aa16.33■□□□□ 0.2
SDCBP-209ENST00000522243 MRPL30Q8TCC3 161 aaKnown RBP16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms