RNA–Protein interactions for RNA: ENST00000520579.5

PDGFRB-207, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 1 (best)

Gene PDGFRB, Length 3,860 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-207ENST00000520579 GJE1A6NN92 205 aa8.77□□□□□ -1.01
PDGFRB-207ENST00000520579 TMEM14DPA8MWL7 114 aa8.77□□□□□ -1.01
PDGFRB-207ENST00000520579 MSTNO14793 375 aa8.77□□□□□ -1.01
PDGFRB-207ENST00000520579 GAPDHP04406 335 aaKnown RBP8.77□□□□□ -1.01
PDGFRB-207ENST00000520579 ARR3P36575 388 aa8.77□□□□□ -1.01
PDGFRB-207ENST00000520579 KIR2DS3Q14952 304 aa8.77□□□□□ -1.01
PDGFRB-207ENST00000520579 PIGYQ3MUY2 71 aa8.77□□□□□ -1.01
PDGFRB-207ENST00000520579 OR5AS1Q8N127 324 aa8.77□□□□□ -1.01
PDGFRB-207ENST00000520579 SLC38A9Q8NBW4 561 aa8.77□□□□□ -1.01
PDGFRB-207ENST00000520579 NT5CQ8TCD5 201 aa8.77□□□□□ -1.01
PDGFRB-207ENST00000520579 GPX7Q96SL4 187 aaPredicted RBP8.77□□□□□ -1.01
PDGFRB-207ENST00000520579 ZBP1Q9H171 429 aa8.77□□□□□ -1.01
PDGFRB-207ENST00000520579 THAP10Q9P2Z0 257 aaPredicted RBP8.77□□□□□ -1.01
PDGFRB-207ENST00000520579 PIGLQ9Y2B2 252 aa8.77□□□□□ -1.01
PDGFRB-207ENST00000520579 TRAV39A0A0B4J263 110 aa8.76□□□□□ -1.01
PDGFRB-207ENST00000520579 ODAMA1E959 279 aa8.76□□□□□ -1.01
PDGFRB-207ENST00000520579 FIGNL2A6NMB9 653 aa8.76□□□□□ -1.01
PDGFRB-207ENST00000520579 K7N7A8 449 aa8.76□□□□□ -1.01
PDGFRB-207ENST00000520579 RANP62826 216 aaKnown RBP8.76□□□□□ -1.01
PDGFRB-207ENST00000520579 NSDHLQ15738 373 aa8.76□□□□□ -1.01
PDGFRB-207ENST00000520579 SPSB3Q6PJ21 355 aa8.76□□□□□ -1.01
PDGFRB-207ENST00000520579 WDR74Q6RFH5 385 aaPredicted RBP8.76□□□□□ -1.01
PDGFRB-207ENST00000520579 GATAD1Q8WUU5 269 aa8.76□□□□□ -1.01
PDGFRB-207ENST00000520579 ZNF479Q96JC4 524 aa8.76□□□□□ -1.01
PDGFRB-207ENST00000520579 ZNF160Q9HCG1 818 aa8.76□□□□□ -1.01
PDGFRB-207ENST00000520579 CLN8Q9UBY8 286 aa8.76□□□□□ -1.01
PDGFRB-207ENST00000520579 LAMTOR2Q9Y2Q5 125 aa8.76□□□□□ -1.01
PDGFRB-207ENST00000520579 IGHV3-15A0A0B4J1V0 119 aa8.76□□□□□ -1.01
PDGFRB-207ENST00000520579 RPL36A-HNRNPH2H7BZ11 118 aa8.76□□□□□ -1.01
PDGFRB-207ENST00000520579 DDAH2O95865 285 aa8.76□□□□□ -1.01
PDGFRB-207ENST00000520579 GALR1P47211 349 aa8.76□□□□□ -1.01
PDGFRB-207ENST00000520579 HLA-BQ31612 363 aa8.76□□□□□ -1.01
PDGFRB-207ENST00000520579 DNM1P34Q6PK57 102 aa8.76□□□□□ -1.01
PDGFRB-207ENST00000520579 BAHD1Q8TBE0 780 aaPredicted RBP8.76□□□□□ -1.01
PDGFRB-207ENST00000520579 CPT1CQ8TCG5 803 aa8.76□□□□□ -1.01
PDGFRB-207ENST00000520579 SCGB1C1Q8TD33 95 aa8.76□□□□□ -1.01
PDGFRB-207ENST00000520579 CACNG8Q8WXS5 425 aa8.76□□□□□ -1.01
PDGFRB-207ENST00000520579 SS18L2Q9UHA2 77 aa8.76□□□□□ -1.01
PDGFRB-207ENST00000520579 COX11Q9Y6N1 276 aa8.76□□□□□ -1.01
PDGFRB-207ENST00000520579 FBLL1A6NHQ2 334 aaKnown RBP8.76□□□□□ -1.01
PDGFRB-207ENST00000520579 E9PLN8 166 aa8.76□□□□□ -1.01
PDGFRB-207ENST00000520579 G3V3Y1 287 aa8.76□□□□□ -1.01
PDGFRB-207ENST00000520579 CHST1O43916 411 aa8.76□□□□□ -1.01
PDGFRB-207ENST00000520579 TOX4O94842 621 aa8.76□□□□□ -1.01
PDGFRB-207ENST00000520579 CRYAAP02489 173 aa8.76□□□□□ -1.01
PDGFRB-207ENST00000520579 CCNOP22674 350 aa8.76□□□□□ -1.01
PDGFRB-207ENST00000520579 GUCA1AP43080 201 aaPredicted RBP8.76□□□□□ -1.01
PDGFRB-207ENST00000520579 VAX1Q5SQQ9 334 aa8.76□□□□□ -1.01
PDGFRB-207ENST00000520579 LILRA6Q6PI73 481 aa8.76□□□□□ -1.01
PDGFRB-207ENST00000520579 TCF23Q7RTU1 214 aa8.76□□□□□ -1.01
PDGFRB-207ENST00000520579 LINC01551Q86U37 167 aa8.76□□□□□ -1.01
PDGFRB-207ENST00000520579 LFNGQ8NES3 379 aa8.76□□□□□ -1.01
PDGFRB-207ENST00000520579 SLC46A1Q96NT5 459 aa8.76□□□□□ -1.01
PDGFRB-207ENST00000520579 NAA60Q9H7X0 242 aa8.76□□□□□ -1.01
PDGFRB-207ENST00000520579 SLC25A22Q9H936 323 aa8.76□□□□□ -1.01
PDGFRB-207ENST00000520579 WDFY3Q8IZQ1 3526 aa8.75□□□□□ -1.01
PDGFRB-207ENST00000520579 NUP210Q8TEM1 1887 aaPredicted RBP8.75□□□□□ -1.01
PDGFRB-207ENST00000520579 TPRP12270 2363 aaKnown RBP8.75□□□□□ -1.01
PDGFRB-207ENST00000520579 PLPP3O14495 311 aa8.75□□□□□ -1.01
PDGFRB-207ENST00000520579 NDUFB8O95169 186 aa8.75□□□□□ -1.01
PDGFRB-207ENST00000520579 LIPFP07098 398 aa8.75□□□□□ -1.01
PDGFRB-207ENST00000520579 SMIM10L1P0DMW3 83 aa8.75□□□□□ -1.01
PDGFRB-207ENST00000520579 CCKARP32238 428 aa8.75□□□□□ -1.01
PDGFRB-207ENST00000520579 SGCBQ16585 318 aa8.75□□□□□ -1.01
PDGFRB-207ENST00000520579 FAM78BQ5VT40 261 aa8.75□□□□□ -1.01
PDGFRB-207ENST00000520579 ATOH7Q8N100 152 aa8.75□□□□□ -1.01
PDGFRB-207ENST00000520579 OR4F5Q8NH21 305 aa8.75□□□□□ -1.01
PDGFRB-207ENST00000520579 HOXB13Q92826 284 aaPredicted RBP8.75□□□□□ -1.01
PDGFRB-207ENST00000520579 SMIM10Q96HG1 83 aa8.75□□□□□ -1.01
PDGFRB-207ENST00000520579 OR4F4Q96R69 305 aa8.75□□□□□ -1.01
PDGFRB-207ENST00000520579 ATP6V0BQ99437 205 aa8.75□□□□□ -1.01
PDGFRB-207ENST00000520579 RBM24Q9BX46 236 aaKnown RBP8.75□□□□□ -1.01
PDGFRB-207ENST00000520579 P4HTMQ9NXG6 502 aa8.75□□□□□ -1.01
PDGFRB-207ENST00000520579 ABI3Q9P2A4 366 aa8.75□□□□□ -1.01
PDGFRB-207ENST00000520579 COLQQ9Y215 455 aaPredicted RBP8.75□□□□□ -1.01
PDGFRB-207ENST00000520579 MTCH2Q9Y6C9 303 aa8.75□□□□□ -1.01
PDGFRB-207ENST00000520579 R4GN57 208 aa8.75□□□□□ -1.01
PDGFRB-207ENST00000520579 FRYQ5TBA9 3013 aa8.75□□□□□ -1.01
PDGFRB-207ENST00000520579 IGKV1-9A0A0C4DH69 117 aa8.75□□□□□ -1.01
PDGFRB-207ENST00000520579 PGPEP1LA6NFU8 196 aa8.75□□□□□ -1.01
PDGFRB-207ENST00000520579 IFNA5P01569 189 aa8.75□□□□□ -1.01
PDGFRB-207ENST00000520579 MYF5P13349 255 aa8.75□□□□□ -1.01
PDGFRB-207ENST00000520579 ARL4DP49703 201 aa8.75□□□□□ -1.01
PDGFRB-207ENST00000520579 EMC4Q5J8M3 183 aa8.75□□□□□ -1.01
PDGFRB-207ENST00000520579 LHX8Q68G74 356 aa8.75□□□□□ -1.01
PDGFRB-207ENST00000520579 TMEM252Q8N6L7 170 aa8.75□□□□□ -1.01
PDGFRB-207ENST00000520579 IL1F10Q8WWZ1 152 aa8.75□□□□□ -1.01
PDGFRB-207ENST00000520579 TMEM9BQ9NQ34 198 aa8.75□□□□□ -1.01
PDGFRB-207ENST00000520579 TBL2Q9Y4P3 447 aaKnown RBP8.75□□□□□ -1.01
PDGFRB-207ENST00000520579 ICE1Q9Y2F5 2266 aa8.75□□□□□ -1.01
PDGFRB-207ENST00000520579 A0A0J9YY10 115 aa8.75□□□□□ -1.01
PDGFRB-207ENST00000520579 CORTO00230 105 aa8.75□□□□□ -1.01
PDGFRB-207ENST00000520579 FSTP19883 344 aa8.75□□□□□ -1.01
PDGFRB-207ENST00000520579 GFERP55789 205 aa8.75□□□□□ -1.01
PDGFRB-207ENST00000520579 KRTDAPP60985 99 aa8.75□□□□□ -1.01
PDGFRB-207ENST00000520579 HHEXQ03014 270 aa8.75□□□□□ -1.01
PDGFRB-207ENST00000520579 ROM1Q03395 351 aa8.75□□□□□ -1.01
PDGFRB-207ENST00000520579 ZNF92Q03936 586 aa8.75□□□□□ -1.01
PDGFRB-207ENST00000520579 OR10S1Q8NGN2 331 aa8.75□□□□□ -1.01
PDGFRB-207ENST00000520579 RNASEH2CQ8TDP1 164 aaKnown RBP8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms