RNA–Protein interactions for RNA: ENST00000519684.5

HMGB4-203, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB4, Length 2,343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-203ENST00000519684 SMIM3Q9BZL3 60 aa7.11□□□□□ -1.27
HMGB4-203ENST00000519684 BARX1Q9HBU1 254 aaPredicted RBP7.11□□□□□ -1.27
HMGB4-203ENST00000519684 CACNA1GO43497 2377 aa7.11□□□□□ -1.27
HMGB4-203ENST00000519684 A0A1B0GWJ7 208 aa7.1□□□□□ -1.27
HMGB4-203ENST00000519684 RNF212BA8MTL3 300 aa7.1□□□□□ -1.27
HMGB4-203ENST00000519684 ZNF705EA8MWA4 302 aaPredicted RBP7.1□□□□□ -1.27
HMGB4-203ENST00000519684 NUDT19A8MXV4 375 aa7.1□□□□□ -1.27
HMGB4-203ENST00000519684 LGALS8O00214 317 aa7.1□□□□□ -1.27
HMGB4-203ENST00000519684 WRBO00258 174 aa7.1□□□□□ -1.27
HMGB4-203ENST00000519684 PSPNO60542 156 aa7.1□□□□□ -1.27
HMGB4-203ENST00000519684 BMP5P22003 454 aa7.1□□□□□ -1.27
HMGB4-203ENST00000519684 IL2RGP31785 369 aa7.1□□□□□ -1.27
HMGB4-203ENST00000519684 GLRXP35754 106 aa7.1□□□□□ -1.27
HMGB4-203ENST00000519684 CEACAM6P40199 344 aa7.1□□□□□ -1.27
HMGB4-203ENST00000519684 CD200P41217 278 aa7.1□□□□□ -1.27
HMGB4-203ENST00000519684 GABRA2P47869 451 aa7.1□□□□□ -1.27
HMGB4-203ENST00000519684 SELENOVP59797 346 aa7.1□□□□□ -1.27
HMGB4-203ENST00000519684 TESK1Q15569 626 aa7.1□□□□□ -1.27
HMGB4-203ENST00000519684 VHLLQ6RSH7 139 aa7.1□□□□□ -1.27
HMGB4-203ENST00000519684 NINJ1Q92982 152 aa7.1□□□□□ -1.27
HMGB4-203ENST00000519684 MARC2Q969Z3 335 aa7.1□□□□□ -1.27
HMGB4-203ENST00000519684 GALMQ96C23 342 aa7.1□□□□□ -1.27
HMGB4-203ENST00000519684 SCNM1Q9BWG6 230 aa7.1□□□□□ -1.27
HMGB4-203ENST00000519684 LIN7CQ9NUP9 197 aaKnown RBP7.1□□□□□ -1.27
HMGB4-203ENST00000519684 PPP1R3CQ9UQK1 317 aa7.1□□□□□ -1.27
HMGB4-203ENST00000519684 ZNF292O60281 2723 aa7.1□□□□□ -1.27
HMGB4-203ENST00000519684 RAB19A4D1S5 217 aa7.1□□□□□ -1.27
HMGB4-203ENST00000519684 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.1□□□□□ -1.27
HMGB4-203ENST00000519684 IGHV3-13P01766 116 aa7.1□□□□□ -1.27
HMGB4-203ENST00000519684 COL10A1Q03692 680 aa7.1□□□□□ -1.27
HMGB4-203ENST00000519684 TBR1Q16650 682 aa7.1□□□□□ -1.27
HMGB4-203ENST00000519684 KRBOX4Q5JUW0 171 aa7.1□□□□□ -1.27
HMGB4-203ENST00000519684 UQCC3Q6UW78 93 aa7.1□□□□□ -1.27
HMGB4-203ENST00000519684 GFRALQ6UXV0 394 aa7.1□□□□□ -1.27
HMGB4-203ENST00000519684 CISD2Q8N5K1 135 aaKnown RBP7.1□□□□□ -1.27
HMGB4-203ENST00000519684 OR1S2Q8NGQ3 325 aa7.1□□□□□ -1.27
HMGB4-203ENST00000519684 OR10Z1Q8NGY1 313 aa7.1□□□□□ -1.27
HMGB4-203ENST00000519684 UBALD1Q8TB05 177 aa7.1□□□□□ -1.27
HMGB4-203ENST00000519684 NARFLQ9H6Q4 476 aa7.1□□□□□ -1.27
HMGB4-203ENST00000519684 PLEKHF2Q9H8W4 249 aa7.1□□□□□ -1.27
HMGB4-203ENST00000519684 DCAF16Q9NXF7 216 aa7.1□□□□□ -1.27
HMGB4-203ENST00000519684 CLEC18AA5D8T8 446 aa7.09□□□□□ -1.27
HMGB4-203ENST00000519684 A8MXE2 369 aa7.09□□□□□ -1.27
HMGB4-203ENST00000519684 SSSCA1O60232 199 aa7.09□□□□□ -1.27
HMGB4-203ENST00000519684 PTBP3O95758 552 aaKnown RBP7.09□□□□□ -1.27
HMGB4-203ENST00000519684 WNT2P09544 360 aa7.09□□□□□ -1.27
HMGB4-203ENST00000519684 OR8U9P0C7N5 309 aa7.09□□□□□ -1.27
HMGB4-203ENST00000519684 PSG2P11465 335 aa7.09□□□□□ -1.27
HMGB4-203ENST00000519684 OR3A1P47881 315 aa7.09□□□□□ -1.27
HMGB4-203ENST00000519684 AESQ08117 197 aa7.09□□□□□ -1.27
HMGB4-203ENST00000519684 GTF3C1Q12789 2109 aa7.09□□□□□ -1.27
HMGB4-203ENST00000519684 NMSQ5H8A3 153 aa7.09□□□□□ -1.27
HMGB4-203ENST00000519684 TRAT1Q6PIZ9 186 aa7.09□□□□□ -1.27
HMGB4-203ENST00000519684 MRGPRGQ86SM5 289 aa7.09□□□□□ -1.27
HMGB4-203ENST00000519684 LRP11Q86VZ4 500 aa7.09□□□□□ -1.27
HMGB4-203ENST00000519684 FAM90A1Q86YD7 464 aa7.09□□□□□ -1.27
HMGB4-203ENST00000519684 UBAC2Q8NBM4 344 aa7.09□□□□□ -1.27
HMGB4-203ENST00000519684 CLEC18CQ8NCF0 446 aa7.09□□□□□ -1.27
HMGB4-203ENST00000519684 OR8U1Q8NH10 309 aa7.09□□□□□ -1.27
HMGB4-203ENST00000519684 SAT2Q96F10 170 aaPredicted RBP7.09□□□□□ -1.27
HMGB4-203ENST00000519684 NARS2Q96I59 477 aaKnown RBP7.09□□□□□ -1.27
HMGB4-203ENST00000519684 SLC25A31Q9H0C2 315 aa7.09□□□□□ -1.27
HMGB4-203ENST00000519684 LPAR3Q9UBY5 353 aa7.09□□□□□ -1.27
HMGB4-203ENST00000519684 INTS1Q8N201 2190 aaKnown RBP7.09□□□□□ -1.27
HMGB4-203ENST00000519684 DMXL1Q9Y485 3027 aa7.09□□□□□ -1.27
HMGB4-203ENST00000519684 ZSCAN5BA6NJL1 495 aa7.09□□□□□ -1.28
HMGB4-203ENST00000519684 C1QTNF9BB2RNN3 333 aa7.09□□□□□ -1.28
HMGB4-203ENST00000519684 C12orf77C9JDV5 145 aa7.09□□□□□ -1.28
HMGB4-203ENST00000519684 ATP6V1G2-DDX39BF2Z307 99 aa7.09□□□□□ -1.28
HMGB4-203ENST00000519684 MED6O75586 246 aa7.09□□□□□ -1.28
HMGB4-203ENST00000519684 HEXAP06865 529 aa7.09□□□□□ -1.28
HMGB4-203ENST00000519684 MMP9P14780 707 aa7.09□□□□□ -1.28
HMGB4-203ENST00000519684 EPHA1P21709 976 aa7.09□□□□□ -1.28
HMGB4-203ENST00000519684 CAV2P51636 162 aa7.09□□□□□ -1.28
HMGB4-203ENST00000519684 TDGF1P3P51864 188 aa7.09□□□□□ -1.28
HMGB4-203ENST00000519684 POLR2GP62487 172 aaKnown RBP eCLIP7.09□□□□□ -1.28
HMGB4-203ENST00000519684 BLOC1S1P78537 153 aa7.09□□□□□ -1.28
HMGB4-203ENST00000519684 SWI5Q1ZZU3 235 aa7.09□□□□□ -1.28
HMGB4-203ENST00000519684 DOLPP1Q86YN1 238 aa7.09□□□□□ -1.28
HMGB4-203ENST00000519684 OR2C3Q8N628 320 aa7.09□□□□□ -1.28
HMGB4-203ENST00000519684 BOLLQ8N9W6 283 aaKnown RBP7.09□□□□□ -1.28
HMGB4-203ENST00000519684 DMBX1Q8NFW5 382 aa7.09□□□□□ -1.28
HMGB4-203ENST00000519684 OR1L1Q8NH94 360 aa7.09□□□□□ -1.28
HMGB4-203ENST00000519684 PPP1R35Q8TAP8 253 aa7.09□□□□□ -1.28
HMGB4-203ENST00000519684 SUN5Q8TC36 379 aa7.09□□□□□ -1.28
HMGB4-203ENST00000519684 ERGIC1Q969X5 290 aa7.09□□□□□ -1.28
HMGB4-203ENST00000519684 MMP26Q9NRE1 261 aa7.09□□□□□ -1.28
HMGB4-203ENST00000519684 SSUH2Q9Y2M2 353 aa7.09□□□□□ -1.28
HMGB4-203ENST00000519684 A0A1B0GU03 582 aa7.08□□□□□ -1.28
HMGB4-203ENST00000519684 K7ENP7 123 aa7.08□□□□□ -1.28
HMGB4-203ENST00000519684 SPRY3O43610 288 aa7.08□□□□□ -1.28
HMGB4-203ENST00000519684 FBXO24O75426 580 aa7.08□□□□□ -1.28
HMGB4-203ENST00000519684 SCO1O75880 301 aa7.08□□□□□ -1.28
HMGB4-203ENST00000519684 HBZP02008 142 aa7.08□□□□□ -1.28
HMGB4-203ENST00000519684 SLC25A6P12236 298 aa7.08□□□□□ -1.28
HMGB4-203ENST00000519684 PRDX2P32119 198 aa7.08□□□□□ -1.28
HMGB4-203ENST00000519684 SULT1A2P50226 295 aa7.08□□□□□ -1.28
HMGB4-203ENST00000519684 AKR1C2P52895 323 aa7.08□□□□□ -1.28
HMGB4-203ENST00000519684 NKX6-1P78426 367 aaPredicted RBP7.08□□□□□ -1.28
HMGB4-203ENST00000519684 EWSR1Q01844 656 aaKnown RBP eCLIP7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms