RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 HSD11B1P28845 292 aa4.69□□□□□ -1.66
CTNNA1-216ENST00000519489 GLP1RP43220 463 aa4.69□□□□□ -1.66
CTNNA1-216ENST00000519489 ZNF137PP52743 207 aa4.69□□□□□ -1.66
CTNNA1-216ENST00000519489 ELLP55199 621 aaPredicted RBP4.69□□□□□ -1.66
CTNNA1-216ENST00000519489 FAM3BP58499 235 aaPredicted RBP4.69□□□□□ -1.66
CTNNA1-216ENST00000519489 RPS16P62249 146 aaKnown RBP4.69□□□□□ -1.66
CTNNA1-216ENST00000519489 TMEM187Q14656 261 aa4.69□□□□□ -1.66
CTNNA1-216ENST00000519489 Q6P435 159 aa4.69□□□□□ -1.66
CTNNA1-216ENST00000519489 MBOAT2Q6ZWT7 520 aa4.69□□□□□ -1.66
CTNNA1-216ENST00000519489 C17orf53Q8N3J3 647 aaPredicted RBP4.69□□□□□ -1.66
CTNNA1-216ENST00000519489 ZNF439Q8NDP4 499 aa4.69□□□□□ -1.66
CTNNA1-216ENST00000519489 ABHD5Q8WTS1 349 aa4.69□□□□□ -1.66
CTNNA1-216ENST00000519489 SNAPC3Q92966 411 aa4.69□□□□□ -1.66
CTNNA1-216ENST00000519489 PKNOX2Q96KN3 472 aa4.69□□□□□ -1.66
CTNNA1-216ENST00000519489 CLCC1Q96S66 551 aa4.69□□□□□ -1.66
CTNNA1-216ENST00000519489 KIF25Q9UIL4 384 aa4.69□□□□□ -1.66
CTNNA1-216ENST00000519489 ZNF221Q9UK13 617 aa4.69□□□□□ -1.66
CTNNA1-216ENST00000519489 OAZ3Q9UMX2 235 aa4.69□□□□□ -1.66
CTNNA1-216ENST00000519489 CORO2BQ9UQ03 480 aa4.69□□□□□ -1.66
CTNNA1-216ENST00000519489 IGHV3-43A0A0B4J1X8 118 aa4.68□□□□□ -1.66
CTNNA1-216ENST00000519489 A0A1W2PPQ1 181 aa4.68□□□□□ -1.66
CTNNA1-216ENST00000519489 ZNF705EA8MWA4 302 aaPredicted RBP4.68□□□□□ -1.66
CTNNA1-216ENST00000519489 IGHV3-43DP0DP04 118 aa4.68□□□□□ -1.66
CTNNA1-216ENST00000519489 KRT4P19013 534 aa4.68□□□□□ -1.66
CTNNA1-216ENST00000519489 FUT3P21217 361 aa4.68□□□□□ -1.66
CTNNA1-216ENST00000519489 GCSHP23434 173 aa4.68□□□□□ -1.66
CTNNA1-216ENST00000519489 GZMMP51124 257 aa4.68□□□□□ -1.66
CTNNA1-216ENST00000519489 POLR2JP52435 117 aaKnown RBP4.68□□□□□ -1.66
CTNNA1-216ENST00000519489 TMEM267Q0VDI3 215 aaPredicted RBP4.68□□□□□ -1.66
CTNNA1-216ENST00000519489 TEX30Q5JUR7 227 aa4.68□□□□□ -1.66
CTNNA1-216ENST00000519489 ZNF684Q5T5D7 378 aa4.68□□□□□ -1.66
CTNNA1-216ENST00000519489 TMEM88Q6PEY1 159 aa4.68□□□□□ -1.66
CTNNA1-216ENST00000519489 SLC25A48Q6ZT89 311 aaKnown RBP4.68□□□□□ -1.66
CTNNA1-216ENST00000519489 SLC25A26Q70HW3 274 aa4.68□□□□□ -1.66
CTNNA1-216ENST00000519489 FUNDC1Q8IVP5 155 aa4.68□□□□□ -1.66
CTNNA1-216ENST00000519489 C11orf65Q8NCR3 313 aa4.68□□□□□ -1.66
CTNNA1-216ENST00000519489 FAM81AQ8TBF8 368 aa4.68□□□□□ -1.66
CTNNA1-216ENST00000519489 MRGPRDQ8TDS7 321 aa4.68□□□□□ -1.66
CTNNA1-216ENST00000519489 RSRC1Q96IZ7 334 aaKnown RBP4.68□□□□□ -1.66
CTNNA1-216ENST00000519489 TEAD3Q99594 435 aa4.68□□□□□ -1.66
CTNNA1-216ENST00000519489 ZNF251Q9BRH9 671 aa4.68□□□□□ -1.66
CTNNA1-216ENST00000519489 NICN1Q9BSH3 213 aa4.68□□□□□ -1.66
CTNNA1-216ENST00000519489 MRPL20Q9BYC9 149 aaKnown RBP4.68□□□□□ -1.66
CTNNA1-216ENST00000519489 POLR2J2Q9GZM3 115 aaKnown RBP4.68□□□□□ -1.66
CTNNA1-216ENST00000519489 POLR2J3Q9H1A7 115 aaKnown RBP4.68□□□□□ -1.66
CTNNA1-216ENST00000519489 TAS2R1Q9NYW7 299 aa4.68□□□□□ -1.66
CTNNA1-216ENST00000519489 PSMC3IPQ9P2W1 217 aaPredicted RBP4.68□□□□□ -1.66
CTNNA1-216ENST00000519489 ZNF230Q9UIE0 474 aaPredicted RBP4.68□□□□□ -1.66
CTNNA1-216ENST00000519489 ERGIC3Q9Y282 383 aa4.68□□□□□ -1.66
CTNNA1-216ENST00000519489 LINC00588Q9Y4M8 146 aa4.68□□□□□ -1.66
CTNNA1-216ENST00000519489 CDH10Q9Y6N8 788 aa4.68□□□□□ -1.66
CTNNA1-216ENST00000519489 TRAV25A0A0B4J276 109 aa4.67□□□□□ -1.66
CTNNA1-216ENST00000519489 H3BUA1 57 aa4.67□□□□□ -1.66
CTNNA1-216ENST00000519489 SLC33A1O00400 549 aaPredicted RBP4.67□□□□□ -1.66
CTNNA1-216ENST00000519489 RRHO14718 337 aa4.67□□□□□ -1.66
CTNNA1-216ENST00000519489 ARPC3O15145 178 aa4.67□□□□□ -1.66
CTNNA1-216ENST00000519489 IGLV2-23P01705 113 aa4.67□□□□□ -1.66
CTNNA1-216ENST00000519489 CSN2P05814 226 aa4.67□□□□□ -1.66
CTNNA1-216ENST00000519489 GYPBP06028 91 aa4.67□□□□□ -1.66
CTNNA1-216ENST00000519489 ABHD2P08910 425 aa4.67□□□□□ -1.66
CTNNA1-216ENST00000519489 C8orf88P0DMB2 117 aa4.67□□□□□ -1.66
CTNNA1-216ENST00000519489 CLUP10909 449 aa4.67□□□□□ -1.66
CTNNA1-216ENST00000519489 PRKACAP17612 351 aa4.67□□□□□ -1.66
CTNNA1-216ENST00000519489 SLC15A1P46059 708 aa4.67□□□□□ -1.66
CTNNA1-216ENST00000519489 RPS6KA3P51812 740 aa4.67□□□□□ -1.66
CTNNA1-216ENST00000519489 RIPPLY1Q0D2K3 151 aa4.67□□□□□ -1.66
CTNNA1-216ENST00000519489 ST3GAL3Q11203 375 aa4.67□□□□□ -1.66
CTNNA1-216ENST00000519489 RNF151Q2KHN1 245 aa4.67□□□□□ -1.66
CTNNA1-216ENST00000519489 CT45A1Q5HYN5 189 aa4.67□□□□□ -1.66
CTNNA1-216ENST00000519489 DLEU7Q6UYE1 221 aa4.67□□□□□ -1.66
CTNNA1-216ENST00000519489 SLC16A12Q6ZSM3 486 aa4.67□□□□□ -1.66
CTNNA1-216ENST00000519489 FAM58AQ8N1B3 248 aa4.67□□□□□ -1.66
CTNNA1-216ENST00000519489 CT45A3Q8NHU0 189 aa4.67□□□□□ -1.66
CTNNA1-216ENST00000519489 PLPPR1Q8TBJ4 325 aa4.67□□□□□ -1.66
CTNNA1-216ENST00000519489 PRRC1Q96M27 445 aa4.67□□□□□ -1.66
CTNNA1-216ENST00000519489 TMEM70Q9BUB7 260 aa4.67□□□□□ -1.66
CTNNA1-216ENST00000519489 GPR84Q9NQS5 396 aa4.67□□□□□ -1.66
CTNNA1-216ENST00000519489 SDR39U1Q9NRG7 319 aaPredicted RBP4.67□□□□□ -1.66
CTNNA1-216ENST00000519489 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.66□□□□□ -1.66
CTNNA1-216ENST00000519489 IGKV1-12A0A0C4DH73 117 aa4.66□□□□□ -1.66
CTNNA1-216ENST00000519489 FAM230AA0A1W2PPH8 454 aa4.66□□□□□ -1.66
CTNNA1-216ENST00000519489 C15orf65H3BRN8 121 aa4.66□□□□□ -1.66
CTNNA1-216ENST00000519489 CA2P00918 260 aa4.66□□□□□ -1.66
CTNNA1-216ENST00000519489 IFNA5P01569 189 aa4.66□□□□□ -1.66
CTNNA1-216ENST00000519489 IGKV1D-12P01611 117 aa4.66□□□□□ -1.66
CTNNA1-216ENST00000519489 PRH1P02810 166 aa4.66□□□□□ -1.66
CTNNA1-216ENST00000519489 MIFP14174 115 aa4.66□□□□□ -1.66
CTNNA1-216ENST00000519489 OMPP47874 163 aa4.66□□□□□ -1.66
CTNNA1-216ENST00000519489 CDC42P60953 191 aa4.66□□□□□ -1.66
CTNNA1-216ENST00000519489 ABCE1P61221 599 aaKnown RBP4.66□□□□□ -1.66
CTNNA1-216ENST00000519489 BNIP1Q12981 228 aa4.66□□□□□ -1.66
CTNNA1-216ENST00000519489 FHL2Q14192 279 aa4.66□□□□□ -1.66
CTNNA1-216ENST00000519489 LINC01590Q5TEZ4 76 aa4.66□□□□□ -1.66
CTNNA1-216ENST00000519489 FAM131AQ6UXB0 335 aa4.66□□□□□ -1.66
CTNNA1-216ENST00000519489 UNQ9165/PRO28630Q6UXU0 137 aa4.66□□□□□ -1.66
CTNNA1-216ENST00000519489 ZNF562Q6V9R5 426 aa4.66□□□□□ -1.66
CTNNA1-216ENST00000519489 ZNF730Q6ZMV8 503 aa4.66□□□□□ -1.66
CTNNA1-216ENST00000519489 RNF113BQ8IZP6 322 aaKnown RBP4.66□□□□□ -1.66
CTNNA1-216ENST00000519489 OFCC1Q8IZS5 231 aa4.66□□□□□ -1.66
CTNNA1-216ENST00000519489 C8orf31Q8N9H6 132 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms