RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 A0A1W2PP11 408 aa7.51□□□□□ -1.21
HDAC3-215ENST00000519474 PGPEP1LA6NFU8 196 aa7.51□□□□□ -1.21
HDAC3-215ENST00000519474 ZNF729A6NN14 1252 aaPredicted RBP7.51□□□□□ -1.21
HDAC3-215ENST00000519474 PTGES3LE9PB15 166 aa7.51□□□□□ -1.21
HDAC3-215ENST00000519474 H0Y8G0 127 aa7.51□□□□□ -1.21
HDAC3-215ENST00000519474 LY6LH3BQJ8 138 aa7.51□□□□□ -1.21
HDAC3-215ENST00000519474 TIMM23O14925 209 aa7.51□□□□□ -1.21
HDAC3-215ENST00000519474 CELP19835 753 aa7.51□□□□□ -1.21
HDAC3-215ENST00000519474 HTR1DP28221 377 aa7.51□□□□□ -1.21
HDAC3-215ENST00000519474 GABRA5P31644 462 aa7.51□□□□□ -1.21
HDAC3-215ENST00000519474 VHLP40337 213 aa7.51□□□□□ -1.21
HDAC3-215ENST00000519474 BLCAPP62952 87 aa7.51□□□□□ -1.21
HDAC3-215ENST00000519474 FLI1Q01543 452 aaPredicted RBP7.51□□□□□ -1.21
HDAC3-215ENST00000519474 BDH1Q02338 343 aa7.51□□□□□ -1.21
HDAC3-215ENST00000519474 SLC34A1Q06495 639 aa7.51□□□□□ -1.21
HDAC3-215ENST00000519474 IL13RA2Q14627 380 aa7.51□□□□□ -1.21
HDAC3-215ENST00000519474 ATXN7L3Q14CW9 347 aaPredicted RBP7.51□□□□□ -1.21
HDAC3-215ENST00000519474 Q499Y3 187 aa7.51□□□□□ -1.21
HDAC3-215ENST00000519474 DDI2Q5TDH0 399 aa7.51□□□□□ -1.21
HDAC3-215ENST00000519474 RSBN1Q5VWQ0 802 aaPredicted RBP7.51□□□□□ -1.21
HDAC3-215ENST00000519474 HIST2H2BDQ6DRA6 164 aa7.51□□□□□ -1.21
HDAC3-215ENST00000519474 AHSA2Q719I0 299 aa7.51□□□□□ -1.21
HDAC3-215ENST00000519474 RTN4RL2Q86UN3 420 aa7.51□□□□□ -1.21
HDAC3-215ENST00000519474 TMEM219Q86XT9 240 aa7.51□□□□□ -1.21
HDAC3-215ENST00000519474 Q8N2B8 174 aa7.51□□□□□ -1.21
HDAC3-215ENST00000519474 OSR2Q8N2R0 312 aa7.51□□□□□ -1.21
HDAC3-215ENST00000519474 STX19Q8N4C7 294 aa7.51□□□□□ -1.21
HDAC3-215ENST00000519474 SUMF2Q8NBJ7 301 aa7.51□□□□□ -1.21
HDAC3-215ENST00000519474 OR4D10Q8NGI6 311 aa7.51□□□□□ -1.21
HDAC3-215ENST00000519474 OR13A1Q8NGR1 328 aa7.51□□□□□ -1.21
HDAC3-215ENST00000519474 NDNFQ8TB73 568 aa7.51□□□□□ -1.21
HDAC3-215ENST00000519474 MARC2Q969Z3 335 aa7.51□□□□□ -1.21
HDAC3-215ENST00000519474 BARHL1Q9BZE3 327 aa7.51□□□□□ -1.21
HDAC3-215ENST00000519474 LINC00574Q9H8X3 128 aa7.51□□□□□ -1.21
HDAC3-215ENST00000519474 ZNF286AQ9HBT8 521 aa7.51□□□□□ -1.21
HDAC3-215ENST00000519474 IL36GQ9NZH8 169 aa7.51□□□□□ -1.21
HDAC3-215ENST00000519474 OR6C3Q9NZP0 311 aa7.51□□□□□ -1.21
HDAC3-215ENST00000519474 KIF25Q9UIL4 384 aa7.51□□□□□ -1.21
HDAC3-215ENST00000519474 FOXJ3Q9UPW0 622 aa7.51□□□□□ -1.21
HDAC3-215ENST00000519474 ST3GAL6Q9Y274 331 aa7.51□□□□□ -1.21
HDAC3-215ENST00000519474 TRAV39A0A0B4J263 110 aa7.5□□□□□ -1.21
HDAC3-215ENST00000519474 PNMA8CA0A1B0GUJ8 204 aa7.5□□□□□ -1.21
HDAC3-215ENST00000519474 SERTM2A0A1B0GWG4 89 aa7.5□□□□□ -1.21
HDAC3-215ENST00000519474 NPIPB11E5RHQ5 1161 aa7.5□□□□□ -1.21
HDAC3-215ENST00000519474 BUB1B-PAK6H3BSN5 160 aa7.5□□□□□ -1.21
HDAC3-215ENST00000519474 HSPB6O14558 160 aa7.5□□□□□ -1.21
HDAC3-215ENST00000519474 CDK1P06493 297 aa7.5□□□□□ -1.21
HDAC3-215ENST00000519474 OR4E1P0C645 316 aa7.5□□□□□ -1.21
HDAC3-215ENST00000519474 CD24P25063 80 aa7.5□□□□□ -1.21
HDAC3-215ENST00000519474 NKX2-5P52952 324 aaPredicted RBP7.5□□□□□ -1.21
HDAC3-215ENST00000519474 GP2P55259 537 aaKnown RBP7.5□□□□□ -1.21
HDAC3-215ENST00000519474 WNT4P56705 351 aa7.5□□□□□ -1.21
HDAC3-215ENST00000519474 TAS2R43P59537 309 aa7.5□□□□□ -1.21
HDAC3-215ENST00000519474 IFITM2Q01629 132 aa7.5□□□□□ -1.21
HDAC3-215ENST00000519474 PAX5Q02548 391 aa7.5□□□□□ -1.21
HDAC3-215ENST00000519474 PAN3Q58A45 887 aaKnown RBP7.5□□□□□ -1.21
HDAC3-215ENST00000519474 NHLRC3Q5JS37 347 aa7.5□□□□□ -1.21
HDAC3-215ENST00000519474 PXDC1Q5TGL8 231 aa7.5□□□□□ -1.21
HDAC3-215ENST00000519474 RNLSQ5VYX0 342 aa7.5□□□□□ -1.21
HDAC3-215ENST00000519474 LIAT1Q6ZQX7 453 aa7.5□□□□□ -1.21
HDAC3-215ENST00000519474 OR4D6Q8NGJ1 314 aa7.5□□□□□ -1.21
HDAC3-215ENST00000519474 OR6Q1Q8NGQ2 317 aa7.5□□□□□ -1.21
HDAC3-215ENST00000519474 RFESDQ8TAC1 157 aa7.5□□□□□ -1.21
HDAC3-215ENST00000519474 CFHR4Q92496 578 aa7.5□□□□□ -1.21
HDAC3-215ENST00000519474 FOXRED1Q96CU9 486 aaPredicted RBP7.5□□□□□ -1.21
HDAC3-215ENST00000519474 CPNE2Q96FN4 548 aaPredicted RBP7.5□□□□□ -1.21
HDAC3-215ENST00000519474 ZNF486Q96H40 463 aaPredicted RBP7.5□□□□□ -1.21
HDAC3-215ENST00000519474 OR14A2Q96R54 314 aa7.5□□□□□ -1.21
HDAC3-215ENST00000519474 ZNF184Q99676 751 aaPredicted RBP7.5□□□□□ -1.21
HDAC3-215ENST00000519474 ALX4Q9H161 411 aaPredicted RBP7.5□□□□□ -1.21
HDAC3-215ENST00000519474 GAL3ST2Q9H3Q3 398 aa7.5□□□□□ -1.21
HDAC3-215ENST00000519474 SLA2Q9H6Q3 261 aa7.5□□□□□ -1.21
HDAC3-215ENST00000519474 RANBP3Q9H6Z4 567 aaPredicted RBP7.5□□□□□ -1.21
HDAC3-215ENST00000519474 ZNF702PQ9H963 129 aa7.5□□□□□ -1.21
HDAC3-215ENST00000519474 RAB18Q9NP72 206 aa7.5□□□□□ -1.21
HDAC3-215ENST00000519474 ABCB10Q9NRK6 738 aa7.5□□□□□ -1.21
HDAC3-215ENST00000519474 SERTAD4Q9NUC0 356 aa7.5□□□□□ -1.21
HDAC3-215ENST00000519474 MEIKINA0A087WXM9 373 aa7.49□□□□□ -1.21
HDAC3-215ENST00000519474 A0A0B4J293 547 aa7.49□□□□□ -1.21
HDAC3-215ENST00000519474 LEUTXA8MZ59 168 aa7.49□□□□□ -1.21
HDAC3-215ENST00000519474 FAM25AB3EWG3 89 aa7.49□□□□□ -1.21
HDAC3-215ENST00000519474 FAM25CB3EWG5 89 aa7.49□□□□□ -1.21
HDAC3-215ENST00000519474 FAM25GB3EWG6 89 aa7.49□□□□□ -1.21
HDAC3-215ENST00000519474 M0QZ24 198 aa7.49□□□□□ -1.21
HDAC3-215ENST00000519474 GEMIN2O14893 280 aaKnown RBP7.49□□□□□ -1.21
HDAC3-215ENST00000519474 KCNAB3O43448 404 aa7.49□□□□□ -1.21
HDAC3-215ENST00000519474 WIPF1O43516 503 aa7.49□□□□□ -1.21
HDAC3-215ENST00000519474 MT-ND4P03905 459 aa7.49□□□□□ -1.21
HDAC3-215ENST00000519474 CSTBP04080 98 aaKnown RBP7.49□□□□□ -1.21
HDAC3-215ENST00000519474 MAS1P04201 325 aa7.49□□□□□ -1.21
HDAC3-215ENST00000519474 FABP1P07148 127 aa7.49□□□□□ -1.21
HDAC3-215ENST00000519474 CD37P11049 281 aa7.49□□□□□ -1.21
HDAC3-215ENST00000519474 FSTP19883 344 aa7.49□□□□□ -1.21
HDAC3-215ENST00000519474 GZMHP20718 246 aa7.49□□□□□ -1.21
HDAC3-215ENST00000519474 S100PP25815 95 aa7.49□□□□□ -1.21
HDAC3-215ENST00000519474 KCNJ3P48549 501 aa7.49□□□□□ -1.21
HDAC3-215ENST00000519474 RBM11P57052 281 aaKnown RBP7.49□□□□□ -1.21
HDAC3-215ENST00000519474 PPP3R1P63098 170 aa7.49□□□□□ -1.21
HDAC3-215ENST00000519474 INSL4Q14641 139 aa7.49□□□□□ -1.21
HDAC3-215ENST00000519474 HERPUD1Q15011 391 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 701.5 ms