RNA–Protein interactions for RNA: ENST00000519321.5

SKP1-206, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-206ENST00000519321 TMEM158Q8WZ71 300 aa18.36■□□□□ 0.53
SKP1-206ENST00000519321 PHF21AQ96BD5 680 aa18.36■□□□□ 0.53
SKP1-206ENST00000519321 KCTD12Q96CX2 325 aaKnown RBP18.36■□□□□ 0.53
SKP1-206ENST00000519321 CMSS1Q9BQ75 279 aaKnown RBP18.36■□□□□ 0.53
SKP1-206ENST00000519321 NAA50Q9GZZ1 169 aaKnown RBP18.36■□□□□ 0.53
SKP1-206ENST00000519321 MEGF9Q9H1U4 602 aa18.36■□□□□ 0.53
SKP1-206ENST00000519321 TAF9BQ9HBM6 251 aa18.36■□□□□ 0.53
SKP1-206ENST00000519321 ZNF286AQ9HBT8 521 aa18.36■□□□□ 0.53
SKP1-206ENST00000519321 ESM1Q9NQ30 184 aa18.36■□□□□ 0.53
SKP1-206ENST00000519321 C12orf4Q9NQ89 552 aa18.36■□□□□ 0.53
SKP1-206ENST00000519321 RHBDL2Q9NX52 303 aa18.36■□□□□ 0.53
SKP1-206ENST00000519321 ZNRD1Q9P1U0 126 aa18.36■□□□□ 0.53
SKP1-206ENST00000519321 SPATA2Q9UM82 520 aa18.36■□□□□ 0.53
SKP1-206ENST00000519321 DNAJC9-AS1A6NH13 148 aa18.35■□□□□ 0.53
SKP1-206ENST00000519321 SERPINE3A8MV23 424 aa18.35■□□□□ 0.53
SKP1-206ENST00000519321 SDCBPO00560 298 aaPredicted RBP18.35■□□□□ 0.53
SKP1-206ENST00000519321 HOXA3O43365 443 aaPredicted RBP18.35■□□□□ 0.53
SKP1-206ENST00000519321 CD3GP09693 182 aa18.35■□□□□ 0.53
SKP1-206ENST00000519321 HIST1H1DP16402 221 aaKnown RBP18.35■□□□□ 0.53
SKP1-206ENST00000519321 HTR1DP28221 377 aa18.35■□□□□ 0.53
SKP1-206ENST00000519321 UBA52P62987 128 aaKnown RBP18.35■□□□□ 0.53
SKP1-206ENST00000519321 MOGAT2Q3SYC2 334 aa18.35■□□□□ 0.53
SKP1-206ENST00000519321 Q3ZCU0 254 aa18.35■□□□□ 0.53
SKP1-206ENST00000519321 ZNF880Q6PDB4 577 aa18.35■□□□□ 0.53
SKP1-206ENST00000519321 BCL7BQ9BQE9 202 aa18.35■□□□□ 0.53
SKP1-206ENST00000519321 BTBD17A6NE02 478 aa18.34■□□□□ 0.53
SKP1-206ENST00000519321 IGLV1-47P01700 117 aa18.34■□□□□ 0.53
SKP1-206ENST00000519321 HBZP02008 142 aa18.34■□□□□ 0.53
SKP1-206ENST00000519321 CEACAM3P40198 252 aa18.34■□□□□ 0.53
SKP1-206ENST00000519321 SLC9A3R2Q15599 337 aa18.34■□□□□ 0.53
SKP1-206ENST00000519321 AANATQ16613 207 aa18.34■□□□□ 0.53
SKP1-206ENST00000519321 LTC4SQ16873 150 aa18.34■□□□□ 0.53
SKP1-206ENST00000519321 BAIAP2L2Q6UXY1 529 aa18.34■□□□□ 0.53
SKP1-206ENST00000519321 CLVS1Q8IUQ0 354 aaPredicted RBP18.34■□□□□ 0.53
SKP1-206ENST00000519321 NDNFQ8TB73 568 aa18.34■□□□□ 0.53
SKP1-206ENST00000519321 RAB2BQ8WUD1 216 aa18.34■□□□□ 0.53
SKP1-206ENST00000519321 GFOD1Q9NXC2 390 aa18.34■□□□□ 0.53
SKP1-206ENST00000519321 AMMECR1Q9Y4X0 333 aaPredicted RBP18.34■□□□□ 0.53
SKP1-206ENST00000519321 A0A0A6YYH2 397 aa18.33■□□□□ 0.52
SKP1-206ENST00000519321 FAM172BPA6NC97 362 aa18.33■□□□□ 0.52
SKP1-206ENST00000519321 A6NJ64 397 aa18.33■□□□□ 0.52
SKP1-206ENST00000519321 MFNGO00587 321 aa18.33■□□□□ 0.52
SKP1-206ENST00000519321 RNASE1P07998 156 aaKnown RBP18.33■□□□□ 0.52
SKP1-206ENST00000519321 IER3P46695 156 aa18.33■□□□□ 0.52
SKP1-206ENST00000519321 RORCP51449 518 aa18.33■□□□□ 0.52
SKP1-206ENST00000519321 TMBIM6P55061 237 aa18.33■□□□□ 0.52
SKP1-206ENST00000519321 HLA-DRB5Q30154 266 aa18.33■□□□□ 0.52
SKP1-206ENST00000519321 LHFPL4Q7Z7J7 247 aa18.33■□□□□ 0.52
SKP1-206ENST00000519321 PRR18Q8N4B5 295 aa18.33■□□□□ 0.52
SKP1-206ENST00000519321 OR4P4Q8NGL7 312 aa18.33■□□□□ 0.52
SKP1-206ENST00000519321 OR5H6Q8NGV6 325 aa18.33■□□□□ 0.52
SKP1-206ENST00000519321 OR5R1Q8NH85 324 aa18.33■□□□□ 0.52
SKP1-206ENST00000519321 SETD6Q8TBK2 473 aa18.33■□□□□ 0.52
SKP1-206ENST00000519321 FAM216AQ8WUB2 273 aa18.33■□□□□ 0.52
SKP1-206ENST00000519321 GALMQ96C23 342 aa18.33■□□□□ 0.52
SKP1-206ENST00000519321 AJUBAQ96IF1 538 aa18.33■□□□□ 0.52
SKP1-206ENST00000519321 DCSTAMPQ9H295 470 aa18.33■□□□□ 0.52
SKP1-206ENST00000519321 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP18.33■□□□□ 0.522e-6■□□□□ 8.4
SKP1-206ENST00000519321 DPM3Q9P2X0 92 aa18.33■□□□□ 0.52
SKP1-206ENST00000519321 CUBNO60494 3623 aa18.32■□□□□ 0.52
SKP1-206ENST00000519321 A0A075B6Q4 140 aa18.32■□□□□ 0.52
SKP1-206ENST00000519321 LEUTXA8MZ59 168 aa18.32■□□□□ 0.52
SKP1-206ENST00000519321 J3QR06 171 aa18.32■□□□□ 0.52
SKP1-206ENST00000519321 NOL3O60936 208 aaKnown RBP18.32■□□□□ 0.52
SKP1-206ENST00000519321 GNB3P16520 340 aa18.32■□□□□ 0.52
SKP1-206ENST00000519321 LOXL3P58215 753 aa18.32■□□□□ 0.52
SKP1-206ENST00000519321 HTD2P86397 168 aa18.32■□□□□ 0.52
SKP1-206ENST00000519321 HMGN3Q15651 99 aa18.32■□□□□ 0.52
SKP1-206ENST00000519321 C8orf31Q8N9H6 132 aa18.32■□□□□ 0.52
SKP1-206ENST00000519321 ACOT12Q8WYK0 555 aa18.32■□□□□ 0.52
SKP1-206ENST00000519321 CYYR1Q96J86 154 aa18.32■□□□□ 0.52
SKP1-206ENST00000519321 MMP28Q9H239 520 aa18.32■□□□□ 0.52
SKP1-206ENST00000519321 DIABLOQ9NR28 239 aa18.32■□□□□ 0.52
SKP1-206ENST00000519321 GNG12Q9UBI6 72 aa18.32■□□□□ 0.52
SKP1-206ENST00000519321 PSG11Q9UQ72 335 aa18.32■□□□□ 0.52
SKP1-206ENST00000519321 KCNK7Q9Y2U2 307 aa18.32■□□□□ 0.52
SKP1-206ENST00000519321 GSTP1P09211 210 aaKnown RBP18.31■□□□□ 0.52
SKP1-206ENST00000519321 ARHGDIBP52566 201 aa18.31■□□□□ 0.52
SKP1-206ENST00000519321 ARFRP1Q13795 201 aa18.31■□□□□ 0.52
SKP1-206ENST00000519321 SSX2Q16385 188 aa18.31■□□□□ 0.52
SKP1-206ENST00000519321 LRRC75BQ2VPJ9 315 aa18.31■□□□□ 0.52
SKP1-206ENST00000519321 CDNFQ49AH0 187 aa18.31■□□□□ 0.52
SKP1-206ENST00000519321 OR1L1Q8NH94 360 aa18.31■□□□□ 0.52
SKP1-206ENST00000519321 UBALD1Q8TB05 177 aa18.31■□□□□ 0.52
SKP1-206ENST00000519321 C17orf50Q8WW18 174 aa18.31■□□□□ 0.52
SKP1-206ENST00000519321 Q9N2K0 584 aa18.31■□□□□ 0.52
SKP1-206ENST00000519321 JPT1Q9UK76 154 aa18.31■□□□□ 0.52
SKP1-206ENST00000519321 RNF212BA8MTL3 300 aa18.3■□□□□ 0.52
SKP1-206ENST00000519321 BUB1B-PAK6H3BSN5 160 aa18.3■□□□□ 0.52
SKP1-206ENST00000519321 IGHV4-59P01825 116 aa18.3■□□□□ 0.52
SKP1-206ENST00000519321 TALDO1P37837 337 aa18.3■□□□□ 0.52
SKP1-206ENST00000519321 PITPNAQ00169 270 aa18.3■□□□□ 0.52
SKP1-206ENST00000519321 SRSF2Q01130 221 aaKnown RBP18.3■□□□□ 0.52
SKP1-206ENST00000519321 UBE2NLQ5JXB2 153 aa18.3■□□□□ 0.52
SKP1-206ENST00000519321 OLFML2AQ68BL7 652 aa18.3■□□□□ 0.52
SKP1-206ENST00000519321 LINC00311Q8N616 119 aa18.3■□□□□ 0.52
SKP1-206ENST00000519321 AP3S1Q92572 193 aa18.3■□□□□ 0.52
SKP1-206ENST00000519321 SLC25A38Q96DW6 304 aa18.3■□□□□ 0.52
SKP1-206ENST00000519321 S100A16Q96FQ6 103 aaKnown RBP18.3■□□□□ 0.52
SKP1-206ENST00000519321 DUX5Q96PT3 197 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms