RNA–Protein interactions for RNA: ENST00000518723.1

TRAPPC9-204, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-204ENST00000518723 C19orf54Q5BKX5 351 aa9.49□□□□□ -0.89
TRAPPC9-204ENST00000518723 SUMF2Q8NBJ7 301 aa9.49□□□□□ -0.89
TRAPPC9-204ENST00000518723 ZNF439Q8NDP4 499 aa9.49□□□□□ -0.89
TRAPPC9-204ENST00000518723 OR5D14Q8NGL3 314 aa9.49□□□□□ -0.89
TRAPPC9-204ENST00000518723 RBMXL1Q96E39 390 aaKnown RBP9.49□□□□□ -0.89
TRAPPC9-204ENST00000518723 NSL1Q96IY1 281 aa9.49□□□□□ -0.89
TRAPPC9-204ENST00000518723 PARP11Q9NR21 331 aa9.49□□□□□ -0.89
TRAPPC9-204ENST00000518723 STUB1Q9UNE7 303 aa9.49□□□□□ -0.89
TRAPPC9-204ENST00000518723 IGHV3-43A0A0B4J1X8 118 aa9.48□□□□□ -0.89
TRAPPC9-204ENST00000518723 OR4C45A6NMZ5 311 aa9.48□□□□□ -0.89
TRAPPC9-204ENST00000518723 ARPC1BO15143 372 aaKnown RBP9.48□□□□□ -0.89
TRAPPC9-204ENST00000518723 SLC31A2O15432 143 aa9.48□□□□□ -0.89
TRAPPC9-204ENST00000518723 LANCL1O43813 399 aa9.48□□□□□ -0.89
TRAPPC9-204ENST00000518723 HTR1AP08908 422 aa9.48□□□□□ -0.89
TRAPPC9-204ENST00000518723 IGHV3-43DP0DP04 118 aa9.48□□□□□ -0.89
TRAPPC9-204ENST00000518723 CRIP2P52943 208 aaPredicted RBP9.48□□□□□ -0.89
TRAPPC9-204ENST00000518723 LSAMPQ13449 338 aa9.48□□□□□ -0.89
TRAPPC9-204ENST00000518723 TMEM30BQ3MIR4 351 aa9.48□□□□□ -0.89
TRAPPC9-204ENST00000518723 NHLRC3Q5JS37 347 aa9.48□□□□□ -0.89
TRAPPC9-204ENST00000518723 ASCL4Q6XD76 172 aa9.48□□□□□ -0.89
TRAPPC9-204ENST00000518723 SERPINA12Q8IW75 414 aa9.48□□□□□ -0.89
TRAPPC9-204ENST00000518723 PARP16Q8N5Y8 322 aa9.48□□□□□ -0.89
TRAPPC9-204ENST00000518723 CPNE2Q96FN4 548 aaPredicted RBP9.48□□□□□ -0.89
TRAPPC9-204ENST00000518723 ZNF581Q9P0T4 197 aa9.48□□□□□ -0.89
TRAPPC9-204ENST00000518723 TCRBV3S1A0A5B6 114 aa9.47□□□□□ -0.89
TRAPPC9-204ENST00000518723 GABRPO00591 440 aa9.47□□□□□ -0.89
TRAPPC9-204ENST00000518723 SLC16A6O15403 523 aa9.47□□□□□ -0.89
TRAPPC9-204ENST00000518723 SOX15O60248 233 aa9.47□□□□□ -0.89
TRAPPC9-204ENST00000518723 HSPB1P04792 205 aaKnown RBP9.47□□□□□ -0.89
TRAPPC9-204ENST00000518723 CALB2P22676 271 aa9.47□□□□□ -0.89
TRAPPC9-204ENST00000518723 BLVRBP30043 206 aaPredicted RBP9.47□□□□□ -0.89
TRAPPC9-204ENST00000518723 ZNF134P52741 427 aa9.47□□□□□ -0.89
TRAPPC9-204ENST00000518723 ACTBP60709 375 aa9.47□□□□□ -0.89
TRAPPC9-204ENST00000518723 C5orf64Q2M2E5 130 aa9.47□□□□□ -0.89
TRAPPC9-204ENST00000518723 CT45A1Q5HYN5 189 aa9.47□□□□□ -0.89
TRAPPC9-204ENST00000518723 STEAP3Q658P3 488 aa9.47□□□□□ -0.89
TRAPPC9-204ENST00000518723 KDM4DQ6B0I6 523 aa9.47□□□□□ -0.89
TRAPPC9-204ENST00000518723 TCTEX1D1Q8N7M0 179 aa9.47□□□□□ -0.89
TRAPPC9-204ENST00000518723 CT45A3Q8NHU0 189 aa9.47□□□□□ -0.89
TRAPPC9-204ENST00000518723 UBALD1Q8TB05 177 aa9.47□□□□□ -0.89
TRAPPC9-204ENST00000518723 TNFAIP8L1Q8WVP5 186 aa9.47□□□□□ -0.89
TRAPPC9-204ENST00000518723 RFKQ969G6 155 aa9.47□□□□□ -0.89
TRAPPC9-204ENST00000518723 FLYWCH2Q96CP2 140 aaKnown RBP9.47□□□□□ -0.89
TRAPPC9-204ENST00000518723 ELOVL1Q9BW60 279 aa9.47□□□□□ -0.89
TRAPPC9-204ENST00000518723 ANKRD60Q9BZ19 345 aa9.47□□□□□ -0.89
TRAPPC9-204ENST00000518723 CST11Q9H112 138 aa9.47□□□□□ -0.89
TRAPPC9-204ENST00000518723 ENOPH1Q9UHY7 261 aa9.47□□□□□ -0.89
TRAPPC9-204ENST00000518723 FOXA2Q9Y261 457 aaPredicted RBP9.47□□□□□ -0.89
TRAPPC9-204ENST00000518723 TNCP24821 2201 aa9.47□□□□□ -0.89
TRAPPC9-204ENST00000518723 PCLOQ9Y6V0 5065 aa9.46□□□□□ -0.89
TRAPPC9-204ENST00000518723 J3QRE1 110 aa9.46□□□□□ -0.9
TRAPPC9-204ENST00000518723 OR7C1O76099 320 aaPredicted RBP9.46□□□□□ -0.9
TRAPPC9-204ENST00000518723 MT-ND4P03905 459 aa9.46□□□□□ -0.9
TRAPPC9-204ENST00000518723 RPSAP08865 295 aaKnown RBP9.46□□□□□ -0.9
TRAPPC9-204ENST00000518723 T-ENOLP0DO92 83 aa9.46□□□□□ -0.9
TRAPPC9-204ENST00000518723 ARSBP15848 533 aa9.46□□□□□ -0.9
TRAPPC9-204ENST00000518723 ALKBH1Q13686 389 aaKnown RBP9.46□□□□□ -0.9
TRAPPC9-204ENST00000518723 RSU1Q15404 277 aa9.46□□□□□ -0.9
TRAPPC9-204ENST00000518723 LIN54Q6MZP7 749 aa9.46□□□□□ -0.9
TRAPPC9-204ENST00000518723 ZNF529Q6P280 563 aa9.46□□□□□ -0.9
TRAPPC9-204ENST00000518723 ZNF497Q6ZNH5 498 aa9.46□□□□□ -0.9
TRAPPC9-204ENST00000518723 HAPLN4Q86UW8 402 aa9.46□□□□□ -0.9
TRAPPC9-204ENST00000518723 SPATA24Q86W54 205 aa9.46□□□□□ -0.9
TRAPPC9-204ENST00000518723 ANKRD13BQ86YJ7 626 aa9.46□□□□□ -0.9
TRAPPC9-204ENST00000518723 NPBQ8NG41 125 aa9.46□□□□□ -0.9
TRAPPC9-204ENST00000518723 OR8J1Q8NGP2 316 aa9.46□□□□□ -0.9
TRAPPC9-204ENST00000518723 OR10K1Q8NGX5 313 aa9.46□□□□□ -0.9
TRAPPC9-204ENST00000518723 PELI1Q96FA3 418 aa9.46□□□□□ -0.9
TRAPPC9-204ENST00000518723 ZNF251Q9BRH9 671 aa9.46□□□□□ -0.9
TRAPPC9-204ENST00000518723 RAB9BQ9NP90 201 aa9.46□□□□□ -0.9
TRAPPC9-204ENST00000518723 IL36GQ9NZH8 169 aa9.46□□□□□ -0.9
TRAPPC9-204ENST00000518723 ST3GAL6Q9Y274 331 aa9.46□□□□□ -0.9
TRAPPC9-204ENST00000518723 ERGIC3Q9Y282 383 aa9.46□□□□□ -0.9
TRAPPC9-204ENST00000518723 A0A1W2PN81 502 aa9.45□□□□□ -0.9
TRAPPC9-204ENST00000518723 NBR2O15453 112 aa9.45□□□□□ -0.9
TRAPPC9-204ENST00000518723 NDUFA3O95167 84 aa9.45□□□□□ -0.9
TRAPPC9-204ENST00000518723 HTR3BO95264 441 aa9.45□□□□□ -0.9
TRAPPC9-204ENST00000518723 CNTFRP26992 372 aa9.45□□□□□ -0.9
TRAPPC9-204ENST00000518723 CHRNA7P36544 502 aa9.45□□□□□ -0.9
TRAPPC9-204ENST00000518723 RBM11P57052 281 aaKnown RBP9.45□□□□□ -0.9
TRAPPC9-204ENST00000518723 NDPQ00604 133 aa9.45□□□□□ -0.9
TRAPPC9-204ENST00000518723 RAB40BQ12829 278 aa9.45□□□□□ -0.9
TRAPPC9-204ENST00000518723 LPCAT4Q643R3 524 aa9.45□□□□□ -0.9
TRAPPC9-204ENST00000518723 PYHIN1Q6K0P9 492 aa9.45□□□□□ -0.9
TRAPPC9-204ENST00000518723 LINC00596Q86U02 117 aa9.45□□□□□ -0.9
TRAPPC9-204ENST00000518723 CCDC107Q8WV48 283 aa9.45□□□□□ -0.9
TRAPPC9-204ENST00000518723 RITA1Q96K30 269 aa9.45□□□□□ -0.9
TRAPPC9-204ENST00000518723 GPER1Q99527 375 aa9.45□□□□□ -0.9
TRAPPC9-204ENST00000518723 THTPAQ9BU02 230 aa9.45□□□□□ -0.9
TRAPPC9-204ENST00000518723 GNG12Q9UBI6 72 aa9.45□□□□□ -0.9
TRAPPC9-204ENST00000518723 FBXO7Q9Y3I1 522 aa9.45□□□□□ -0.9
TRAPPC9-204ENST00000518723 DAPL1A0PJW8 107 aa9.44□□□□□ -0.9
TRAPPC9-204ENST00000518723 C12orf77C9JDV5 145 aa9.44□□□□□ -0.9
TRAPPC9-204ENST00000518723 AIPO00170 330 aa9.44□□□□□ -0.9
TRAPPC9-204ENST00000518723 GEMIN2O14893 280 aaKnown RBP9.44□□□□□ -0.9
TRAPPC9-204ENST00000518723 MAGEB3O15480 346 aa9.44□□□□□ -0.9
TRAPPC9-204ENST00000518723 SPINT2O43291 252 aa9.44□□□□□ -0.9
TRAPPC9-204ENST00000518723 RAB3AP20336 220 aa9.44□□□□□ -0.9
TRAPPC9-204ENST00000518723 FLOT2Q14254 428 aa9.44□□□□□ -0.9
TRAPPC9-204ENST00000518723 ECSCRQ19T08 205 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms