RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 RAB40BQ12829 278 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 FOXE3Q13461 319 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 IL18R1Q13478 541 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 OR8G1Q15617 311 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 FAM74A3Q4VXF1 159 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 TP53I3Q53FA7 332 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 ACTBL2Q562R1 376 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 SLC25A30Q5SVS4 291 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 BCL2L15Q5TBC7 163 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 TMEM65Q6PI78 240 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 PRSS57Q6UWY2 283 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 IZUMO2Q6UXV1 221 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 FBXW12Q6X9E4 464 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 Q6ZNX1 250 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 SSX6Q7RTT6 188 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 PEG10Q86TG7 708 aaKnown RBP2.29□□□□□ -2.04
SKP1-204ENST00000517691 TGIF2LYQ8IUE0 185 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 RFLNBQ8N5W9 214 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 ACBD7Q8N6N7 88 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 MAPK1IP1LQ8NDC0 245 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 ZNF680Q8NEM1 530 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 BPIFB6Q8NFQ5 453 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 OR8G5Q8NG78 346 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 OR10AD1Q8NGE0 317 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 OR13G1Q8NGZ3 307 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 OR8S1Q8NH09 359 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 OR5R1Q8NH85 324 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 OR51E1Q8TCB6 317 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 IGFBPL1Q8WX77 278 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 CCL17Q92583 94 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 RDH5Q92781 318 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 MRPL48Q96GC5 212 aaKnown RBP2.29□□□□□ -2.04
SKP1-204ENST00000517691 OR8B4Q96RC9 309 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 S1PR3Q99500 378 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 MAP1LC3CQ9BXW4 147 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 PBOV1Q9GZY1 135 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 NIPAL2Q9H841 368 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 NOX4Q9NPH5 578 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 SIRT7Q9NRC8 400 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 IL36GQ9NZH8 169 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 OR52A1Q9UKL2 312 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 MPDZO75970 2070 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 VPS13CQ709C8 3753 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 ANKRD17O75179 2603 aaKnown RBP2.29□□□□□ -2.04
SKP1-204ENST00000517691 CCDC168Q8NDH2 2452 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 IGHV4-30-2A0A087WSY4 118 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 A0A0A6YYH2 397 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 IRGMA1A4Y4 181 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 ISPDA4D126 451 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 EFCAB10A6NFE3 127 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 A6NJ64 397 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 LINC00473A8K010 186 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 CD300LBA8K4G0 201 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 ZNF850A8MQ14 1090 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 IQCF6A8MYZ5 107 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 PRR32B1ATL7 298 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 F5H5P2 479 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 LOC110117498-PIK3R3F6TDL0 507 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 H0YJX3 145 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 SH2D1BO14796 132 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 FCN3O75636 299 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 SULT1C4O75897 302 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 NXPH2O95156 264 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 NDUFB4O95168 129 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 TSPAN13O95857 204 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 CA1P00915 261 aaPredicted RBP2.29□□□□□ -2.04
SKP1-204ENST00000517691 IFNA6P05013 189 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 HTR1AP08908 422 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 ARSBP15848 533 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 MYL12AP19105 171 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 ANOS1P23352 680 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 HLA-DMAP28067 261 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 TNFSF8P32971 234 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 VHLP40337 213 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 CRYBB2P43320 205 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 SRP9P49458 86 aaKnown RBP2.29□□□□□ -2.04
SKP1-204ENST00000517691 OR12D2P58182 307 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 ISL1P61371 349 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 FAM3AP98173 230 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 ZNF85Q03923 595 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 MFGE8Q08431 387 aaPredicted RBP2.29□□□□□ -2.04
SKP1-204ENST00000517691 MED21Q13503 144 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 VAMP3Q15836 100 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 TMEM255AQ5JRV8 349 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 SPNS3Q6ZMD2 512 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 TMPRSS11AQ6ZMR5 421 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 Q6ZR03 302 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 SATL1Q86VE3 508 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 RDH10Q8IZV5 341 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 STX19Q8N4C7 294 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 FTMTQ8N4E7 242 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 C8orf31Q8N9H6 132 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 SEMA6DQ8NFY4 1073 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 OR8B12Q8NGG6 310 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 OR52I1Q8NGK6 324 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 GPR148Q8TDV2 347 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 APH1BQ8WW43 257 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 ITLN1Q8WWA0 313 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 LINC00476Q8WZB0 136 aa2.29□□□□□ -2.04
SKP1-204ENST00000517691 TMEM18Q96B42 140 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms