RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 ZNF331Q9NQX6 463 aaPredicted RBP9.42□□□□□ -0.9
PCDHGA1-202ENST00000517417 WSB1Q9Y6I7 421 aa9.42□□□□□ -0.9
PCDHGA1-202ENST00000517417 ARHGEF17Q96PE2 2063 aaPredicted RBP9.42□□□□□ -0.9
PCDHGA1-202ENST00000517417 CRYM-AS1A6NIL9 109 aa9.42□□□□□ -0.9
PCDHGA1-202ENST00000517417 ADH4P08319 380 aa9.42□□□□□ -0.9
PCDHGA1-202ENST00000517417 TAS2R45P59539 299 aa9.42□□□□□ -0.9
PCDHGA1-202ENST00000517417 FAM166AQ6J272 317 aa9.42□□□□□ -0.9
PCDHGA1-202ENST00000517417 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.42□□□□□ -0.9
PCDHGA1-202ENST00000517417 WNK2Q9Y3S1 2297 aa9.42□□□□□ -0.9
PCDHGA1-202ENST00000517417 IGKV1D-43A0A0B4J1Z2 117 aa9.41□□□□□ -0.9
PCDHGA1-202ENST00000517417 RBFOX3A6NFN3 312 aa9.41□□□□□ -0.9
PCDHGA1-202ENST00000517417 MBP02144 154 aa9.41□□□□□ -0.9
PCDHGA1-202ENST00000517417 ACAA1P09110 424 aaPredicted RBP9.41□□□□□ -0.9
PCDHGA1-202ENST00000517417 ZP4Q12836 540 aa9.41□□□□□ -0.9
PCDHGA1-202ENST00000517417 BTNL3Q6UXE8 466 aa9.41□□□□□ -0.9
PCDHGA1-202ENST00000517417 ZNF574Q6ZN55 896 aaPredicted RBP9.41□□□□□ -0.9
PCDHGA1-202ENST00000517417 CA5BP1Q8WTZ4 195 aa9.41□□□□□ -0.9
PCDHGA1-202ENST00000517417 LRFN3Q9BTN0 628 aa9.41□□□□□ -0.9
PCDHGA1-202ENST00000517417 RTN4RQ9BZR6 473 aa9.41□□□□□ -0.9
PCDHGA1-202ENST00000517417 OR51M1Q9H341 326 aa9.41□□□□□ -0.9
PCDHGA1-202ENST00000517417 BARX1Q9HBU1 254 aaPredicted RBP9.41□□□□□ -0.9
PCDHGA1-202ENST00000517417 KIAA1671Q9BY89 1806 aa9.41□□□□□ -0.9
PCDHGA1-202ENST00000517417 K7EQM0 130 aa9.41□□□□□ -0.9
PCDHGA1-202ENST00000517417 FABP4P15090 132 aa9.41□□□□□ -0.9
PCDHGA1-202ENST00000517417 ZNF708P17019 499 aa9.41□□□□□ -0.9
PCDHGA1-202ENST00000517417 BCL3P20749 454 aa9.41□□□□□ -0.9
PCDHGA1-202ENST00000517417 S100A7P31151 101 aa9.41□□□□□ -0.9
PCDHGA1-202ENST00000517417 FNDC7Q5VTL7 733 aa9.41□□□□□ -0.9
PCDHGA1-202ENST00000517417 SMIM15Q7Z3B0 74 aa9.41□□□□□ -0.9
PCDHGA1-202ENST00000517417 BMPERQ8N8U9 685 aa9.41□□□□□ -0.9
PCDHGA1-202ENST00000517417 SMIM8Q96KF7 97 aa9.41□□□□□ -0.9
PCDHGA1-202ENST00000517417 ZNF488Q96MN9 340 aa9.41□□□□□ -0.9
PCDHGA1-202ENST00000517417 ZNF835Q9Y2P0 537 aa9.41□□□□□ -0.9
PCDHGA1-202ENST00000517417 LIPGQ9Y5X9 500 aa9.41□□□□□ -0.9
PCDHGA1-202ENST00000517417 HS3ST3B1Q9Y662 390 aa9.41□□□□□ -0.9
PCDHGA1-202ENST00000517417 COL4A3Q01955 1670 aa9.41□□□□□ -0.9
PCDHGA1-202ENST00000517417 NOTCH4Q99466 2003 aa9.41□□□□□ -0.9
PCDHGA1-202ENST00000517417 DNAH14Q0VDD8 3507 aa9.41□□□□□ -0.9
PCDHGA1-202ENST00000517417 TOX4O94842 621 aa9.41□□□□□ -0.9
PCDHGA1-202ENST00000517417 P2RY1P47900 373 aa9.41□□□□□ -0.9
PCDHGA1-202ENST00000517417 OR13D1Q8NGV5 346 aa9.41□□□□□ -0.9
PCDHGA1-202ENST00000517417 NTNG2Q96CW9 530 aa9.41□□□□□ -0.9
PCDHGA1-202ENST00000517417 GSN-AS1Q9NRJ2 163 aa9.41□□□□□ -0.9
PCDHGA1-202ENST00000517417 KIF26BQ2KJY2 2108 aa9.41□□□□□ -0.9
PCDHGA1-202ENST00000517417 LY86O95711 162 aa9.41□□□□□ -0.9
PCDHGA1-202ENST00000517417 FHITP49789 147 aa9.41□□□□□ -0.9
PCDHGA1-202ENST00000517417 NHLH2Q02577 135 aa9.41□□□□□ -0.9
PCDHGA1-202ENST00000517417 MOB1BQ7L9L4 216 aa9.41□□□□□ -0.9
PCDHGA1-202ENST00000517417 PAQR4Q8N4S7 273 aaPredicted RBP9.41□□□□□ -0.9
PCDHGA1-202ENST00000517417 BTF3L4Q96K17 158 aa9.41□□□□□ -0.9
PCDHGA1-202ENST00000517417 POM121L2Q96KW2 1035 aa9.41□□□□□ -0.9
PCDHGA1-202ENST00000517417 CCL28Q9NRJ3 127 aa9.41□□□□□ -0.9
PCDHGA1-202ENST00000517417 SLC7A10Q9NS82 523 aa9.41□□□□□ -0.9
PCDHGA1-202ENST00000517417 COA4Q9NYJ1 87 aa9.41□□□□□ -0.9
PCDHGA1-202ENST00000517417 A0A1W2PRD5 423 aa9.4□□□□□ -0.9
PCDHGA1-202ENST00000517417 A0A1W2PRF3 423 aa9.4□□□□□ -0.9
PCDHGA1-202ENST00000517417 A0A1W2PRM7 423 aa9.4□□□□□ -0.9
PCDHGA1-202ENST00000517417 TMPRSS2O15393 492 aa9.4□□□□□ -0.9
PCDHGA1-202ENST00000517417 TIAF1O95411 115 aa9.4□□□□□ -0.9
PCDHGA1-202ENST00000517417 IGHMP01871 453 aa9.4□□□□□ -0.9
PCDHGA1-202ENST00000517417 SP1P08047 785 aa9.4□□□□□ -0.9
PCDHGA1-202ENST00000517417 ZNF528Q3MIS6 628 aa9.4□□□□□ -0.9
PCDHGA1-202ENST00000517417 NCR3LG1Q68D85 454 aa9.4□□□□□ -0.9
PCDHGA1-202ENST00000517417 DBX2Q6ZNG2 339 aa9.4□□□□□ -0.9
PCDHGA1-202ENST00000517417 LIAT1Q6ZQX7 453 aa9.4□□□□□ -0.9
PCDHGA1-202ENST00000517417 TBC1D26Q86UD7 250 aa9.4□□□□□ -0.9
PCDHGA1-202ENST00000517417 GAPTQ8N292 157 aa9.4□□□□□ -0.9
PCDHGA1-202ENST00000517417 SAP25Q8TEE9 199 aa9.4□□□□□ -0.9
PCDHGA1-202ENST00000517417 TMEM230Q96A57 120 aa9.4□□□□□ -0.9
PCDHGA1-202ENST00000517417 HES7Q9BYE0 225 aa9.4□□□□□ -0.9
PCDHGA1-202ENST00000517417 CHST5Q9GZS9 411 aa9.4□□□□□ -0.9
PCDHGA1-202ENST00000517417 PKDREJQ9NTG1 2253 aa9.4□□□□□ -0.9
PCDHGA1-202ENST00000517417 PRR19A6NJB7 356 aa9.4□□□□□ -0.9
PCDHGA1-202ENST00000517417 NCBP2LA6PVI3 153 aaKnown RBP9.4□□□□□ -0.9
PCDHGA1-202ENST00000517417 PPYP01298 95 aa9.4□□□□□ -0.9
PCDHGA1-202ENST00000517417 NTF3P20783 257 aa9.4□□□□□ -0.9
PCDHGA1-202ENST00000517417 SLC38A11Q08AI6 406 aa9.4□□□□□ -0.9
PCDHGA1-202ENST00000517417 FOXO1Q12778 655 aa9.4□□□□□ -0.9
PCDHGA1-202ENST00000517417 NUDT16L1Q9BRJ7 211 aaKnown RBP9.4□□□□□ -0.9
PCDHGA1-202ENST00000517417 LHFPL6Q9Y693 200 aa9.4□□□□□ -0.9
PCDHGA1-202ENST00000517417 CT45A10P0DMU9 189 aa9.4□□□□□ -0.91
PCDHGA1-202ENST00000517417 COX7A1P24310 79 aa9.4□□□□□ -0.91
PCDHGA1-202ENST00000517417 NSUN5P2Q63ZY6 315 aa9.4□□□□□ -0.91
PCDHGA1-202ENST00000517417 NUFIP2Q7Z417 695 aaKnown RBP9.4□□□□□ -0.91
PCDHGA1-202ENST00000517417 OR5B3Q8NH48 314 aa9.4□□□□□ -0.91
PCDHGA1-202ENST00000517417 RTBDNQ9BSG5 229 aaPredicted RBP9.4□□□□□ -0.91
PCDHGA1-202ENST00000517417 TTTY12Q9BZ98 90 aa9.4□□□□□ -0.91
PCDHGA1-202ENST00000517417 OR2J1Q9GZK6 312 aa9.4□□□□□ -0.91
PCDHGA1-202ENST00000517417 SLC2A9Q9NRM0 540 aa9.4□□□□□ -0.91
PCDHGA1-202ENST00000517417 CYTL1Q9NRR1 136 aa9.4□□□□□ -0.91
PCDHGA1-202ENST00000517417 IL36GQ9NZH8 169 aa9.4□□□□□ -0.91
PCDHGA1-202ENST00000517417 MBPP02686 304 aaPredicted RBP9.4□□□□□ -0.91
PCDHGA1-202ENST00000517417 HOXB1P14653 301 aaPredicted RBP9.4□□□□□ -0.91
PCDHGA1-202ENST00000517417 COL19A1Q14993 1142 aa9.4□□□□□ -0.91
PCDHGA1-202ENST00000517417 FBXW9Q5XUX1 488 aa9.4□□□□□ -0.91
PCDHGA1-202ENST00000517417 DNM1P46Q6ZS02 220 aa9.4□□□□□ -0.91
PCDHGA1-202ENST00000517417 ZNF383Q8NA42 475 aa9.4□□□□□ -0.91
PCDHGA1-202ENST00000517417 WBP1Q96G27 269 aa9.4□□□□□ -0.91
PCDHGA1-202ENST00000517417 RAB40CQ96S21 281 aa9.4□□□□□ -0.91
PCDHGA1-202ENST00000517417 PRO1933Q9H354 126 aa9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms