RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 BDP1A6H8Y1 2624 aa2.05□□□□□ -2.08
HERC4-215ENST00000515753 LAMA4Q16363 1823 aa2.05□□□□□ -2.08
HERC4-215ENST00000515753 PLXNA4Q9HCM2 1894 aa2.05□□□□□ -2.08
HERC4-215ENST00000515753 MYO9BQ13459 2157 aa2.05□□□□□ -2.08
HERC4-215ENST00000515753 IGHV6-1A0A0B4J1U7 121 aa2.05□□□□□ -2.08
HERC4-215ENST00000515753 IGHV5-51A0A0C4DH38 117 aa2.05□□□□□ -2.08
HERC4-215ENST00000515753 IGHV3-64DA0A0J9YX35 117 aa2.05□□□□□ -2.08
HERC4-215ENST00000515753 A0A1W2PQ67 120 aa2.05□□□□□ -2.08
HERC4-215ENST00000515753 TMEM210A6NLX4 147 aa2.05□□□□□ -2.08
HERC4-215ENST00000515753 ZNF705GA8MUZ8 300 aaPredicted RBP2.05□□□□□ -2.08
HERC4-215ENST00000515753 KRBOX1C9JBD0 128 aa2.05□□□□□ -2.08
HERC4-215ENST00000515753 F5H5K5 113 aa2.05□□□□□ -2.08
HERC4-215ENST00000515753 F5H5T6 163 aa2.05□□□□□ -2.08
HERC4-215ENST00000515753 GOLGA6L19H0YKK7 550 aa2.05□□□□□ -2.08
HERC4-215ENST00000515753 ATP8B1O43520 1251 aa2.05□□□□□ -2.08
HERC4-215ENST00000515753 IGKV1D-16P01601 117 aa2.05□□□□□ -2.08
HERC4-215ENST00000515753 HLA-DRAP01903 254 aa2.05□□□□□ -2.08
HERC4-215ENST00000515753 RLN2P04090 185 aa2.05□□□□□ -2.08
HERC4-215ENST00000515753 IGHV1-8P0DP01 117 aa2.05□□□□□ -2.08
HERC4-215ENST00000515753 ADRB3P13945 408 aa2.05□□□□□ -2.08
HERC4-215ENST00000515753 TSPOP30536 169 aa2.05□□□□□ -2.08
HERC4-215ENST00000515753 ZNF136P52737 540 aa2.05□□□□□ -2.08
HERC4-215ENST00000515753 CRISP3P54108 245 aa2.05□□□□□ -2.08
HERC4-215ENST00000515753 SLC18A1P54219 525 aa2.05□□□□□ -2.08
HERC4-215ENST00000515753 ELOCQ15369 112 aa2.05□□□□□ -2.08
HERC4-215ENST00000515753 UAP1Q16222 522 aaPredicted RBP2.05□□□□□ -2.08
HERC4-215ENST00000515753 CLEC12BQ2HXU8 276 aa2.05□□□□□ -2.08
HERC4-215ENST00000515753 GOLGA7BQ2TAP0 167 aa2.05□□□□□ -2.08
HERC4-215ENST00000515753 FBXL19-AS1Q494R0 122 aa2.05□□□□□ -2.08
HERC4-215ENST00000515753 ATP6AP1LQ52LC2 224 aa2.05□□□□□ -2.08
HERC4-215ENST00000515753 PDZD11Q5EBL8 140 aa2.05□□□□□ -2.08
HERC4-215ENST00000515753 CLEC12AQ5QGZ9 265 aa2.05□□□□□ -2.08
HERC4-215ENST00000515753 C9orf64Q5T6V5 341 aa2.05□□□□□ -2.08
HERC4-215ENST00000515753 KDM4DQ6B0I6 523 aa2.05□□□□□ -2.08
HERC4-215ENST00000515753 MED27Q6P2C8 311 aa2.05□□□□□ -2.08
HERC4-215ENST00000515753 CEMP1Q6PRD7 247 aaPredicted RBP2.05□□□□□ -2.08
HERC4-215ENST00000515753 OPN5Q6U736 354 aa2.05□□□□□ -2.08
HERC4-215ENST00000515753 FAM92BQ6ZTR7 304 aa2.05□□□□□ -2.08
HERC4-215ENST00000515753 PAGE2Q7Z2X7 111 aa2.05□□□□□ -2.08
HERC4-215ENST00000515753 MDP1Q86V88 176 aa2.05□□□□□ -2.08
HERC4-215ENST00000515753 C10orf107Q8IVU9 208 aa2.05□□□□□ -2.08
HERC4-215ENST00000515753 C12orf29Q8N999 325 aa2.05□□□□□ -2.08
HERC4-215ENST00000515753 LINC00301Q8NCQ3 95 aa2.05□□□□□ -2.08
HERC4-215ENST00000515753 OR5T1Q8NG75 326 aa2.05□□□□□ -2.08
HERC4-215ENST00000515753 OR4K2Q8NGD2 314 aa2.05□□□□□ -2.08
HERC4-215ENST00000515753 ACTL9Q8TC94 416 aa2.05□□□□□ -2.08
HERC4-215ENST00000515753 BLNKQ8WV28 456 aa2.05□□□□□ -2.08
HERC4-215ENST00000515753 ANP32BQ92688 251 aaKnown RBP2.05□□□□□ -2.08
HERC4-215ENST00000515753 CHMP6Q96FZ7 201 aa2.05□□□□□ -2.08
HERC4-215ENST00000515753 QKIQ96PU8 341 aaKnown RBP eCLIP2.05□□□□□ -2.08
HERC4-215ENST00000515753 RBP7Q96R05 134 aa2.05□□□□□ -2.08
HERC4-215ENST00000515753 FBXO6Q9NRD1 293 aaPredicted RBP2.05□□□□□ -2.08
HERC4-215ENST00000515753 CISHQ9NSE2 258 aa2.05□□□□□ -2.08
HERC4-215ENST00000515753 OR12D3Q9UGF7 316 aa2.05□□□□□ -2.08
HERC4-215ENST00000515753 HMGXB4Q9UGU5 601 aa2.05□□□□□ -2.08
HERC4-215ENST00000515753 NLRC5Q86WI3 1866 aa2.05□□□□□ -2.08
HERC4-215ENST00000515753 TMEM131Q92545 1883 aa2.05□□□□□ -2.08
HERC4-215ENST00000515753 ARID1AO14497 2285 aa2.05□□□□□ -2.08
HERC4-215ENST00000515753 FAM186AA6NE01 2351 aa2.05□□□□□ -2.08
HERC4-215ENST00000515753 IGKV1-27A0A075B6S5 117 aa2.04□□□□□ -2.08
HERC4-215ENST00000515753 IGHV5-10-1A0A0J9YXX1 117 aa2.04□□□□□ -2.08
HERC4-215ENST00000515753 SPTY2D1-AS1A0A0U1RR47 76 aa2.04□□□□□ -2.08
HERC4-215ENST00000515753 OR2AT4A6NND4 320 aa2.04□□□□□ -2.08
HERC4-215ENST00000515753 C10orf142B7Z368 130 aa2.04□□□□□ -2.08
HERC4-215ENST00000515753 UPK1AO00322 258 aa2.04□□□□□ -2.08
HERC4-215ENST00000515753 KPNA3O00505 521 aaPredicted RBP2.04□□□□□ -2.08
HERC4-215ENST00000515753 HCRTO43612 131 aa2.04□□□□□ -2.08
HERC4-215ENST00000515753 CCDC22O60826 627 aa2.04□□□□□ -2.08
HERC4-215ENST00000515753 ENTPD6O75354 484 aa2.04□□□□□ -2.08
HERC4-215ENST00000515753 CA11O75493 328 aa2.04□□□□□ -2.08
HERC4-215ENST00000515753 REM1O75628 298 aa2.04□□□□□ -2.08
HERC4-215ENST00000515753 TNFSF15O95150 251 aa2.04□□□□□ -2.08
HERC4-215ENST00000515753 IGLV3-27P01718 113 aa2.04□□□□□ -2.08
HERC4-215ENST00000515753 MT-ND4P03905 459 aa2.04□□□□□ -2.08
HERC4-215ENST00000515753 CDK1P06493 297 aa2.04□□□□□ -2.08
HERC4-215ENST00000515753 C8orf88P0DMB2 117 aa2.04□□□□□ -2.08
HERC4-215ENST00000515753 CTSEP14091 401 aa2.04□□□□□ -2.08
HERC4-215ENST00000515753 ATF1P18846 271 aa2.04□□□□□ -2.08
HERC4-215ENST00000515753 S100A5P33763 92 aa2.04□□□□□ -2.08
HERC4-215ENST00000515753 POLR2IP36954 125 aaKnown RBP2.04□□□□□ -2.08
HERC4-215ENST00000515753 COILP38432 576 aaPredicted RBP2.04□□□□□ -2.08
HERC4-215ENST00000515753 PSMD8P48556 350 aa2.04□□□□□ -2.08
HERC4-215ENST00000515753 FAM3AP98173 230 aa2.04□□□□□ -2.08
HERC4-215ENST00000515753 CDK5Q00535 292 aa2.04□□□□□ -2.08
HERC4-215ENST00000515753 ADIGQ0VDE8 80 aa2.04□□□□□ -2.08
HERC4-215ENST00000515753 PMVKQ15126 192 aa2.04□□□□□ -2.08
HERC4-215ENST00000515753 BCL2A1Q16548 175 aa2.04□□□□□ -2.08
HERC4-215ENST00000515753 IMPG1Q17R60 797 aa2.04□□□□□ -2.08
HERC4-215ENST00000515753 COX19Q49B96 90 aa2.04□□□□□ -2.08
HERC4-215ENST00000515753 ZNF658BQ4V348 819 aaPredicted RBP2.04□□□□□ -2.08
HERC4-215ENST00000515753 BRMS1LQ5PSV4 323 aa2.04□□□□□ -2.08
HERC4-215ENST00000515753 ARHGAP21Q5T5U3 1957 aa2.04□□□□□ -2.08
HERC4-215ENST00000515753 OGFRL1Q5TC84 451 aaPredicted RBP2.04□□□□□ -2.08
HERC4-215ENST00000515753 TMEM215Q68D42 235 aa2.04□□□□□ -2.08
HERC4-215ENST00000515753 Q6ZSR6 202 aa2.04□□□□□ -2.08
HERC4-215ENST00000515753 FAM183BPQ6ZVS7 135 aa2.04□□□□□ -2.08
HERC4-215ENST00000515753 NCCRP1Q6ZVX7 275 aaPredicted RBP2.04□□□□□ -2.08
HERC4-215ENST00000515753 ZNF429Q86V71 674 aa2.04□□□□□ -2.08
HERC4-215ENST00000515753 GKN2Q86XP6 184 aa2.04□□□□□ -2.08
HERC4-215ENST00000515753 SLC13A5Q86YT5 568 aaPredicted RBP2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms