RNA–Protein interactions for RNA: ENST00000514307.5

NUP54-214, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-214ENST00000514307 DCAF16Q9NXF7 216 aa13.32□□□□□ -0.28
NUP54-214ENST00000514307 MIOXQ9UGB7 285 aa13.32□□□□□ -0.28
NUP54-214ENST00000514307 RBM7Q9Y580 266 aaKnown RBP13.32□□□□□ -0.28
NUP54-214ENST00000514307 DIDO1Q9BTC0 2240 aaKnown RBP13.32□□□□□ -0.28
NUP54-214ENST00000514307 RELNP78509 3460 aa13.31□□□□□ -0.28
NUP54-214ENST00000514307 IGKV1-6A0A0C4DH72 117 aa13.31□□□□□ -0.28
NUP54-214ENST00000514307 TEX13DA0A0J9YY54 714 aaPredicted RBP13.31□□□□□ -0.28
NUP54-214ENST00000514307 C9orf170A2RU37 121 aa13.31□□□□□ -0.28
NUP54-214ENST00000514307 SLC22A5O76082 557 aa13.31□□□□□ -0.28
NUP54-214ENST00000514307 RGS11O94810 467 aa13.31□□□□□ -0.28
NUP54-214ENST00000514307 DUS4LO95620 317 aaKnown RBP13.31□□□□□ -0.28
NUP54-214ENST00000514307 ANXA3P12429 323 aa13.31□□□□□ -0.28
NUP54-214ENST00000514307 VAMP1P23763 118 aa13.31□□□□□ -0.28
NUP54-214ENST00000514307 LIN54Q6MZP7 749 aa13.31□□□□□ -0.28
NUP54-214ENST00000514307 UXS1Q8NBZ7 420 aa13.31□□□□□ -0.28
NUP54-214ENST00000514307 ADAD2Q8NCV1 583 aaKnown RBP13.31□□□□□ -0.28
NUP54-214ENST00000514307 OR13A1Q8NGR1 328 aa13.31□□□□□ -0.28
NUP54-214ENST00000514307 FAM216AQ8WUB2 273 aa13.31□□□□□ -0.28
NUP54-214ENST00000514307 SLC5A7Q9GZV3 580 aa13.31□□□□□ -0.28
NUP54-214ENST00000514307 TOLLIPQ9H0E2 274 aa13.31□□□□□ -0.28
NUP54-214ENST00000514307 C5orf66Q9H5L9 145 aa13.31□□□□□ -0.28
NUP54-214ENST00000514307 OR2S2Q9NQN1 319 aa13.31□□□□□ -0.28
NUP54-214ENST00000514307 TAS2R3Q9NYW6 316 aa13.31□□□□□ -0.28
NUP54-214ENST00000514307 UBE2J1Q9Y385 318 aaPredicted RBP13.31□□□□□ -0.28
NUP54-214ENST00000514307 A0A0B4J2A0 478 aa13.3□□□□□ -0.28
NUP54-214ENST00000514307 PIGBOS1A0A0B4J2F0 54 aa13.3□□□□□ -0.28
NUP54-214ENST00000514307 PPIHO43447 177 aaKnown RBP13.3□□□□□ -0.28
NUP54-214ENST00000514307 RP2O75695 350 aa13.3□□□□□ -0.28
NUP54-214ENST00000514307 SFT2D2O95562 160 aa13.3□□□□□ -0.28
NUP54-214ENST00000514307 HLA-AP01891 365 aaKnown RBP13.3□□□□□ -0.28
NUP54-214ENST00000514307 SULT1A3P0DMM9 295 aa13.3□□□□□ -0.28
NUP54-214ENST00000514307 SULT1A4P0DMN0 295 aa13.3□□□□□ -0.28
NUP54-214ENST00000514307 DHRS2Q13268 280 aa13.3□□□□□ -0.28
NUP54-214ENST00000514307 HERPUD1Q15011 391 aa13.3□□□□□ -0.28
NUP54-214ENST00000514307 FCN2Q15485 313 aa13.3□□□□□ -0.28
NUP54-214ENST00000514307 TMEM155Q4W5P6 130 aa13.3□□□□□ -0.28
NUP54-214ENST00000514307 KCTD9Q7L273 389 aa13.3□□□□□ -0.28
NUP54-214ENST00000514307 NLRC3Q7RTR2 1065 aa13.3□□□□□ -0.28
NUP54-214ENST00000514307 FAM216BQ8N7L0 139 aa13.3□□□□□ -0.28
NUP54-214ENST00000514307 OR10A7Q8NGE5 316 aa13.3□□□□□ -0.28
NUP54-214ENST00000514307 OR10V1Q8NGI7 309 aa13.3□□□□□ -0.28
NUP54-214ENST00000514307 COQ8AQ8NI60 647 aa13.3□□□□□ -0.28
NUP54-214ENST00000514307 CAPSLQ8WWF8 208 aa13.3□□□□□ -0.28
NUP54-214ENST00000514307 AKR1E2Q96JD6 320 aa13.3□□□□□ -0.28
NUP54-214ENST00000514307 LIME1Q9H400 295 aa13.3□□□□□ -0.28
NUP54-214ENST00000514307 SHPKQ9UHJ6 478 aa13.3□□□□□ -0.28
NUP54-214ENST00000514307 ZNF221Q9UK13 617 aa13.3□□□□□ -0.28
NUP54-214ENST00000514307 KBTBD11-OT1A0A1B0GTJ5 212 aa13.29□□□□□ -0.28
NUP54-214ENST00000514307 A0A1W2PPH5 198 aa13.29□□□□□ -0.28
NUP54-214ENST00000514307 A0A1W2PPR1 153 aa13.29□□□□□ -0.28
NUP54-214ENST00000514307 ZNF729A6NN14 1252 aaPredicted RBP13.29□□□□□ -0.28
NUP54-214ENST00000514307 LYNX1G3V0Z9 82 aa13.29□□□□□ -0.28
NUP54-214ENST00000514307 GPR31O00270 319 aa13.29□□□□□ -0.28
NUP54-214ENST00000514307 IFNA2P01563 188 aa13.29□□□□□ -0.28
NUP54-214ENST00000514307 IGHV2-70P01814 119 aa13.29□□□□□ -0.28
NUP54-214ENST00000514307 LYNX1P0DP58 116 aa13.29□□□□□ -0.28
NUP54-214ENST00000514307 CD34P28906 385 aa13.29□□□□□ -0.28
NUP54-214ENST00000514307 BAMBIQ13145 260 aa13.29□□□□□ -0.28
NUP54-214ENST00000514307 PPP1R1AQ13522 171 aa13.29□□□□□ -0.28
NUP54-214ENST00000514307 TPRX1Q8N7U7 411 aa13.29□□□□□ -0.28
NUP54-214ENST00000514307 ZBTB34Q8NCN2 500 aa13.29□□□□□ -0.28
NUP54-214ENST00000514307 OR1L1Q8NH94 360 aa13.29□□□□□ -0.28
NUP54-214ENST00000514307 MITD1Q8WV92 249 aa13.29□□□□□ -0.28
NUP54-214ENST00000514307 SECTM1Q8WVN6 248 aa13.29□□□□□ -0.28
NUP54-214ENST00000514307 EDARADDQ8WWZ3 215 aa13.29□□□□□ -0.28
NUP54-214ENST00000514307 ASB13Q8WXK3 278 aa13.29□□□□□ -0.28
NUP54-214ENST00000514307 RAB39BQ96DA2 213 aa13.29□□□□□ -0.28
NUP54-214ENST00000514307 GAL3ST2Q9H3Q3 398 aa13.29□□□□□ -0.28
NUP54-214ENST00000514307 PLEKHF2Q9H8W4 249 aa13.29□□□□□ -0.28
NUP54-214ENST00000514307 RDH8Q9NYR8 311 aa13.29□□□□□ -0.28
NUP54-214ENST00000514307 CLN8Q9UBY8 286 aa13.29□□□□□ -0.28
NUP54-214ENST00000514307 LINC00312Q9Y6C7 94 aa13.29□□□□□ -0.28
NUP54-214ENST00000514307 C15orf65H3BRN8 121 aa13.28□□□□□ -0.28
NUP54-214ENST00000514307 OVOL3O00110 214 aa13.28□□□□□ -0.28
NUP54-214ENST00000514307 F2RL2O00254 374 aa13.28□□□□□ -0.28
NUP54-214ENST00000514307 DVL1O14640 695 aa13.28□□□□□ -0.28
NUP54-214ENST00000514307 B3GALNT1O75752 331 aa13.28□□□□□ -0.28
NUP54-214ENST00000514307 CGB3P0DN86 165 aa13.28□□□□□ -0.28
NUP54-214ENST00000514307 CGB7P0DN87 165 aa13.28□□□□□ -0.28
NUP54-214ENST00000514307 PI3P19957 117 aa13.28□□□□□ -0.28
NUP54-214ENST00000514307 RBMXP38159 391 aaKnown RBP13.28□□□□□ -0.28
NUP54-214ENST00000514307 PIGPP57054 158 aa13.28□□□□□ -0.28
NUP54-214ENST00000514307 RND3P61587 244 aa13.28□□□□□ -0.28
NUP54-214ENST00000514307 RPL31P62899 125 aaKnown RBP13.28□□□□□ -0.28
NUP54-214ENST00000514307 SRSF1Q07955 248 aaKnown RBP eCLIP13.28□□□□□ -0.287e-7■□□□□ 8.2
NUP54-214ENST00000514307 MSMO1Q15800 293 aa13.28□□□□□ -0.28
NUP54-214ENST00000514307 C11orf91Q3C1V1 193 aa13.28□□□□□ -0.28
NUP54-214ENST00000514307 LYPD2Q6UXB3 125 aa13.28□□□□□ -0.28
NUP54-214ENST00000514307 OR2AK2Q8NG84 335 aa13.28□□□□□ -0.28
NUP54-214ENST00000514307 OR52B4Q8NGK2 314 aa13.28□□□□□ -0.28
NUP54-214ENST00000514307 OR52M1Q8NGK5 317 aa13.28□□□□□ -0.28
NUP54-214ENST00000514307 RFESDQ8TAC1 157 aa13.28□□□□□ -0.28
NUP54-214ENST00000514307 RTN4IP1Q8WWV3 396 aaPredicted RBP13.28□□□□□ -0.28
NUP54-214ENST00000514307 LINC00574Q9H8X3 128 aa13.28□□□□□ -0.28
NUP54-214ENST00000514307 CALYQ9NYX4 217 aa13.28□□□□□ -0.28
NUP54-214ENST00000514307 MGAT4CQ9UBM8 478 aa13.28□□□□□ -0.28
NUP54-214ENST00000514307 JPT1Q9UK76 154 aa13.28□□□□□ -0.28
NUP54-214ENST00000514307 ANKHD1Q8IWZ3 2542 aaKnown RBP13.27□□□□□ -0.29
NUP54-214ENST00000514307 TRBV23-1A0A0A0MS06 115 aa13.27□□□□□ -0.29
NUP54-214ENST00000514307 CLEC18AA5D8T8 446 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms