RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 ZNF286AQ9HBT8 521 aa8□□□□□ -1.13
TOPBP1-209ENST00000513818 RSL24D1Q9UHA3 163 aaKnown RBP8□□□□□ -1.13
TOPBP1-209ENST00000513818 NUP50Q9UKX7 468 aa8□□□□□ -1.13
TOPBP1-209ENST00000513818 SESN1Q9Y6P5 492 aa8□□□□□ -1.13
TOPBP1-209ENST00000513818 TRAV18A0A075B6X5 111 aa7.99□□□□□ -1.13
TOPBP1-209ENST00000513818 A0A0U1RQK1 487 aa7.99□□□□□ -1.13
TOPBP1-209ENST00000513818 KBTBD11-OT1A0A1B0GTJ5 212 aa7.99□□□□□ -1.13
TOPBP1-209ENST00000513818 A0A1W2PPE3 182 aa7.99□□□□□ -1.13
TOPBP1-209ENST00000513818 C15orf65H3BRN8 121 aa7.99□□□□□ -1.13
TOPBP1-209ENST00000513818 NAPSAO96009 420 aa7.99□□□□□ -1.13
TOPBP1-209ENST00000513818 FAM157CP0CG43 387 aa7.99□□□□□ -1.13
TOPBP1-209ENST00000513818 CGB3P0DN86 165 aa7.99□□□□□ -1.13
TOPBP1-209ENST00000513818 CGB7P0DN87 165 aa7.99□□□□□ -1.13
TOPBP1-209ENST00000513818 ZNF182P17025 639 aaPredicted RBP7.99□□□□□ -1.13
TOPBP1-209ENST00000513818 RANBP1P43487 201 aa7.99□□□□□ -1.13
TOPBP1-209ENST00000513818 SCAND1P57086 179 aa7.99□□□□□ -1.13
TOPBP1-209ENST00000513818 PAX5Q02548 391 aa7.99□□□□□ -1.13
TOPBP1-209ENST00000513818 DYNC1I2Q13409 638 aaKnown RBP7.99□□□□□ -1.13
TOPBP1-209ENST00000513818 ARFRP1Q13795 201 aa7.99□□□□□ -1.13
TOPBP1-209ENST00000513818 GNMTQ14749 295 aa7.99□□□□□ -1.13
TOPBP1-209ENST00000513818 GAPTQ8N292 157 aa7.99□□□□□ -1.13
TOPBP1-209ENST00000513818 ARL11Q969Q4 196 aa7.99□□□□□ -1.13
TOPBP1-209ENST00000513818 BCL7BQ9BQE9 202 aa7.99□□□□□ -1.13
TOPBP1-209ENST00000513818 MS4A7Q9GZW8 240 aaPredicted RBP7.99□□□□□ -1.13
TOPBP1-209ENST00000513818 TAF9BQ9HBM6 251 aa7.99□□□□□ -1.13
TOPBP1-209ENST00000513818 C12orf4Q9NQ89 552 aa7.99□□□□□ -1.13
TOPBP1-209ENST00000513818 TAS2R3Q9NYW6 316 aa7.99□□□□□ -1.13
TOPBP1-209ENST00000513818 IDI2-AS1Q9NZ38 188 aa7.99□□□□□ -1.13
TOPBP1-209ENST00000513818 CCDC59Q9P031 241 aaKnown RBP7.99□□□□□ -1.13
TOPBP1-209ENST00000513818 ZNF230Q9UIE0 474 aaPredicted RBP7.99□□□□□ -1.13
TOPBP1-209ENST00000513818 HSF4Q9ULV5 492 aa7.99□□□□□ -1.13
TOPBP1-209ENST00000513818 SETD2Q9BYW2 2564 aaPredicted RBP7.98□□□□□ -1.13
TOPBP1-209ENST00000513818 IGHV2-26A0A0B4J1V2 119 aa7.98□□□□□ -1.13
TOPBP1-209ENST00000513818 hCG_1809904A0A1W2PP81 198 aa7.98□□□□□ -1.13
TOPBP1-209ENST00000513818 A0A1W2PPE2 198 aa7.98□□□□□ -1.13
TOPBP1-209ENST00000513818 A0A1W2PR64 198 aa7.98□□□□□ -1.13
TOPBP1-209ENST00000513818 A0A1W2PRV1 198 aa7.98□□□□□ -1.13
TOPBP1-209ENST00000513818 MEIOCA2RUB1 952 aa7.98□□□□□ -1.13
TOPBP1-209ENST00000513818 MEIS3P1A6NDR6 274 aa7.98□□□□□ -1.13
TOPBP1-209ENST00000513818 NPFFO15130 113 aa7.98□□□□□ -1.13
TOPBP1-209ENST00000513818 SSX5O60225 188 aa7.98□□□□□ -1.13
TOPBP1-209ENST00000513818 HBZP02008 142 aa7.98□□□□□ -1.13
TOPBP1-209ENST00000513818 ARG1P05089 322 aa7.98□□□□□ -1.13
TOPBP1-209ENST00000513818 GLAP06280 429 aa7.98□□□□□ -1.13
TOPBP1-209ENST00000513818 FCGR3AP08637 254 aa7.98□□□□□ -1.13
TOPBP1-209ENST00000513818 CD3GP09693 182 aa7.98□□□□□ -1.13
TOPBP1-209ENST00000513818 ELK1P19419 428 aa7.98□□□□□ -1.13
TOPBP1-209ENST00000513818 SAA4P35542 130 aa7.98□□□□□ -1.13
TOPBP1-209ENST00000513818 TAS2R20P59543 309 aa7.98□□□□□ -1.13
TOPBP1-209ENST00000513818 HLA-DRB3P79483 266 aa7.98□□□□□ -1.13
TOPBP1-209ENST00000513818 HMGN3Q15651 99 aa7.98□□□□□ -1.13
TOPBP1-209ENST00000513818 DEFB112Q30KQ8 113 aa7.98□□□□□ -1.13
TOPBP1-209ENST00000513818 ZNF260Q3ZCT1 412 aa7.98□□□□□ -1.13
TOPBP1-209ENST00000513818 CDNFQ49AH0 187 aa7.98□□□□□ -1.13
TOPBP1-209ENST00000513818 PLA1AQ53H76 456 aa7.98□□□□□ -1.13
TOPBP1-209ENST00000513818 ARSJQ5FYB0 599 aaPredicted RBP7.98□□□□□ -1.13
TOPBP1-209ENST00000513818 RNASE12Q5GAN4 147 aaKnown RBP7.98□□□□□ -1.13
TOPBP1-209ENST00000513818 LDLRAD2Q5SZI1 272 aa7.98□□□□□ -1.13
TOPBP1-209ENST00000513818 C6orf183Q5T699 404 aa7.98□□□□□ -1.13
TOPBP1-209ENST00000513818 NCR3LG1Q68D85 454 aa7.98□□□□□ -1.13
TOPBP1-209ENST00000513818 HEPN1Q6WQI6 88 aa7.98□□□□□ -1.13
TOPBP1-209ENST00000513818 LHFPL4Q7Z7J7 247 aa7.98□□□□□ -1.13
TOPBP1-209ENST00000513818 LAX1Q8IWV1 398 aa7.98□□□□□ -1.13
TOPBP1-209ENST00000513818 ZNF565Q8N9K5 539 aa7.98□□□□□ -1.13
TOPBP1-209ENST00000513818 OR52L2PQ8NGH6 319 aa7.98□□□□□ -1.13
TOPBP1-209ENST00000513818 PHF21AQ96BD5 680 aa7.98□□□□□ -1.13
TOPBP1-209ENST00000513818 DUX5Q96PT3 197 aa7.98□□□□□ -1.13
TOPBP1-209ENST00000513818 TMEM133Q9H2Q1 129 aa7.98□□□□□ -1.13
TOPBP1-209ENST00000513818 MIXL1Q9H2W2 232 aa7.98□□□□□ -1.13
TOPBP1-209ENST00000513818 MBNL3Q9NUK0 354 aaKnown RBP7.98□□□□□ -1.13
TOPBP1-209ENST00000513818 IGKV1D-8A0A087WSZ0 117 aa7.97□□□□□ -1.13
TOPBP1-209ENST00000513818 ODF3BA8MYP8 253 aa7.97□□□□□ -1.13
TOPBP1-209ENST00000513818 FAM25AB3EWG3 89 aa7.97□□□□□ -1.13
TOPBP1-209ENST00000513818 FAM25CB3EWG5 89 aa7.97□□□□□ -1.13
TOPBP1-209ENST00000513818 FAM25GB3EWG6 89 aa7.97□□□□□ -1.13
TOPBP1-209ENST00000513818 NPIPB11E5RHQ5 1161 aa7.97□□□□□ -1.13
TOPBP1-209ENST00000513818 H3BUI4 141 aa7.97□□□□□ -1.13
TOPBP1-209ENST00000513818 SDCBPO00560 298 aaPredicted RBP7.97□□□□□ -1.13
TOPBP1-209ENST00000513818 CTDSP2O14595 271 aa7.97□□□□□ -1.13
TOPBP1-209ENST00000513818 SLC31A2O15432 143 aa7.97□□□□□ -1.13
TOPBP1-209ENST00000513818 CA11O75493 328 aa7.97□□□□□ -1.13
TOPBP1-209ENST00000513818 RBP4P02753 201 aa7.97□□□□□ -1.13
TOPBP1-209ENST00000513818 FPR2P25090 351 aa7.97□□□□□ -1.13
TOPBP1-209ENST00000513818 SOX6P35712 828 aa7.97□□□□□ -1.13
TOPBP1-209ENST00000513818 GNG2P59768 71 aa7.97□□□□□ -1.13
TOPBP1-209ENST00000513818 MRPS15P82914 257 aaKnown RBP7.97□□□□□ -1.13
TOPBP1-209ENST00000513818 RELBQ01201 579 aa7.97□□□□□ -1.13
TOPBP1-209ENST00000513818 TMEM69Q5SWH9 247 aa7.97□□□□□ -1.13
TOPBP1-209ENST00000513818 ZNF880Q6PDB4 577 aa7.97□□□□□ -1.13
TOPBP1-209ENST00000513818 SIGLECL1Q8N7X8 197 aa7.97□□□□□ -1.13
TOPBP1-209ENST00000513818 OR13D1Q8NGV5 346 aa7.97□□□□□ -1.13
TOPBP1-209ENST00000513818 IL1F10Q8WWZ1 152 aa7.97□□□□□ -1.13
TOPBP1-209ENST00000513818 ACOT12Q8WYK0 555 aa7.97□□□□□ -1.13
TOPBP1-209ENST00000513818 AP3S1Q92572 193 aa7.97□□□□□ -1.13
TOPBP1-209ENST00000513818 CLEC7AQ9BXN2 247 aa7.97□□□□□ -1.13
TOPBP1-209ENST00000513818 SLIRPQ9GZT3 109 aaKnown RBP7.97□□□□□ -1.13
TOPBP1-209ENST00000513818 C6orf62Q9GZU0 229 aaPredicted RBP7.97□□□□□ -1.13
TOPBP1-209ENST00000513818 PARP12Q9H0J9 701 aaKnown RBP7.97□□□□□ -1.13
TOPBP1-209ENST00000513818 ABCG5Q9H222 651 aa7.97□□□□□ -1.13
TOPBP1-209ENST00000513818 NCOR1P1Q9H4R4 102 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms