RNA–Protein interactions for RNA: ENST00000513769.5

TPM3-221, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-221ENST00000513769 CABLES2Q9BTV7 478 aa8.26□□□□□ -1.09
TPM3-221ENST00000513769 RSRP1Q9BUV0 290 aa8.26□□□□□ -1.09
TPM3-221ENST00000513769 TMPRSS13Q9BYE2 586 aa8.26□□□□□ -1.09
TPM3-221ENST00000513769 C5orf66Q9H5L9 145 aa8.26□□□□□ -1.09
TPM3-221ENST00000513769 DYNLRB1Q9NP97 96 aa8.26□□□□□ -1.09
TPM3-221ENST00000513769 TMEM106BQ9NUM4 274 aa8.26□□□□□ -1.09
TPM3-221ENST00000513769 OR14J1Q9UGF5 321 aa8.26□□□□□ -1.09
TPM3-221ENST00000513769 ZNF222Q9UK12 451 aa8.26□□□□□ -1.09
TPM3-221ENST00000513769 VSIG4Q9Y279 399 aa8.26□□□□□ -1.09
TPM3-221ENST00000513769 OR2W1Q9Y3N9 320 aa8.26□□□□□ -1.09
TPM3-221ENST00000513769 NOTCH2Q04721 2471 aa8.26□□□□□ -1.09
TPM3-221ENST00000513769 SPTAN1Q13813 2472 aaKnown RBP8.26□□□□□ -1.09
TPM3-221ENST00000513769 CADP27708 2225 aa8.25□□□□□ -1.09
TPM3-221ENST00000513769 IGHV1-69-2A0A0G2JMI3 117 aa8.25□□□□□ -1.09
TPM3-221ENST00000513769 FAM221AA4D161 298 aa8.25□□□□□ -1.09
TPM3-221ENST00000513769 SPINT2O43291 252 aa8.25□□□□□ -1.09
TPM3-221ENST00000513769 SFT2D2O95562 160 aa8.25□□□□□ -1.09
TPM3-221ENST00000513769 PPYP01298 95 aa8.25□□□□□ -1.09
TPM3-221ENST00000513769 C1QBP02746 253 aa8.25□□□□□ -1.09
TPM3-221ENST00000513769 ANXA3P12429 323 aa8.25□□□□□ -1.09
TPM3-221ENST00000513769 GABRA2P47869 451 aa8.25□□□□□ -1.09
TPM3-221ENST00000513769 OR3A1P47881 315 aa8.25□□□□□ -1.09
TPM3-221ENST00000513769 NPY4RP50391 375 aa8.25□□□□□ -1.09
TPM3-221ENST00000513769 TMEM33P57088 247 aa8.25□□□□□ -1.09
TPM3-221ENST00000513769 RAP2BP61225 183 aa8.25□□□□□ -1.09
TPM3-221ENST00000513769 HERV-K104P61576 105 aa8.25□□□□□ -1.09
TPM3-221ENST00000513769 RND3P61587 244 aa8.25□□□□□ -1.09
TPM3-221ENST00000513769 HLA-DRB3P79483 266 aa8.25□□□□□ -1.09
TPM3-221ENST00000513769 MEF2CQ06413 473 aaPredicted RBP8.25□□□□□ -1.09
TPM3-221ENST00000513769 DHRS2Q13268 280 aa8.25□□□□□ -1.09
TPM3-221ENST00000513769 HMGN3Q15651 99 aa8.25□□□□□ -1.09
TPM3-221ENST00000513769 CARTPTQ16568 116 aa8.25□□□□□ -1.09
TPM3-221ENST00000513769 KRBOX4Q5JUW0 171 aa8.25□□□□□ -1.09
TPM3-221ENST00000513769 STUMQ69YW2 141 aa8.25□□□□□ -1.09
TPM3-221ENST00000513769 TMED4Q7Z7H5 227 aa8.25□□□□□ -1.09
TPM3-221ENST00000513769 RTN4RL2Q86UN3 420 aa8.25□□□□□ -1.09
TPM3-221ENST00000513769 DTX2Q86UW9 622 aa8.25□□□□□ -1.09
TPM3-221ENST00000513769 CMTM1Q8IZ96 169 aa8.25□□□□□ -1.09
TPM3-221ENST00000513769 CCDC71LQ8N9Z2 235 aa8.25□□□□□ -1.09
TPM3-221ENST00000513769 OR2AK2Q8NG84 335 aa8.25□□□□□ -1.09
TPM3-221ENST00000513769 OR10A7Q8NGE5 316 aa8.25□□□□□ -1.09
TPM3-221ENST00000513769 COQ8AQ8NI60 647 aa8.25□□□□□ -1.09
TPM3-221ENST00000513769 DACT3Q96B18 629 aaPredicted RBP8.25□□□□□ -1.09
TPM3-221ENST00000513769 KIRREL1Q96J84 757 aa8.25□□□□□ -1.09
TPM3-221ENST00000513769 ZNF436Q9C0F3 470 aaPredicted RBP8.25□□□□□ -1.09
TPM3-221ENST00000513769 LINC00574Q9H8X3 128 aa8.25□□□□□ -1.09
TPM3-221ENST00000513769 TAF9BQ9HBM6 251 aa8.25□□□□□ -1.09
TPM3-221ENST00000513769 ZNF69Q9UC07 566 aa8.25□□□□□ -1.09
TPM3-221ENST00000513769 GAB2Q9UQC2 676 aa8.25□□□□□ -1.09
TPM3-221ENST00000513769 USP9XQ93008 2570 aaPredicted RBP8.24□□□□□ -1.09
TPM3-221ENST00000513769 UTP20O75691 2785 aaKnown RBP8.24□□□□□ -1.09
TPM3-221ENST00000513769 RELNP78509 3460 aa8.24□□□□□ -1.09
TPM3-221ENST00000513769 FAM172BPA6NC97 362 aa8.24□□□□□ -1.09
TPM3-221ENST00000513769 DBX1A6NMT0 343 aa8.24□□□□□ -1.09
TPM3-221ENST00000513769 ITGB1BP1O14713 200 aa8.24□□□□□ -1.09
TPM3-221ENST00000513769 SIGLEC5O15389 551 aa8.24□□□□□ -1.09
TPM3-221ENST00000513769 PLAUP00749 431 aa8.24□□□□□ -1.09
TPM3-221ENST00000513769 DANCRP0C864 163 aa8.24□□□□□ -1.09
TPM3-221ENST00000513769 CGB3P0DN86 165 aa8.24□□□□□ -1.09
TPM3-221ENST00000513769 CGB7P0DN87 165 aa8.24□□□□□ -1.09
TPM3-221ENST00000513769 PGAM2P15259 253 aa8.24□□□□□ -1.09
TPM3-221ENST00000513769 AKR1C4P17516 323 aa8.24□□□□□ -1.09
TPM3-221ENST00000513769 RCC1P18754 421 aaPredicted RBP8.24□□□□□ -1.09
TPM3-221ENST00000513769 GNRHRP30968 328 aa8.24□□□□□ -1.09
TPM3-221ENST00000513769 UQCRFS1P47985 274 aa8.24□□□□□ -1.09
TPM3-221ENST00000513769 AESQ08117 197 aa8.24□□□□□ -1.09
TPM3-221ENST00000513769 FGL1Q08830 312 aa8.24□□□□□ -1.09
TPM3-221ENST00000513769 FCN2Q15485 313 aa8.24□□□□□ -1.09
TPM3-221ENST00000513769 ABCA11PQ4W5N1 156 aa8.24□□□□□ -1.09
TPM3-221ENST00000513769 IGSF11Q5DX21 431 aa8.24□□□□□ -1.09
TPM3-221ENST00000513769 H1FOOQ8IZA3 346 aaPredicted RBP8.24□□□□□ -1.09
TPM3-221ENST00000513769 BATF2Q8N1L9 274 aa8.24□□□□□ -1.09
TPM3-221ENST00000513769 LRTM2Q8N967 370 aa8.24□□□□□ -1.09
TPM3-221ENST00000513769 OR11H7Q8NGC8 314 aa8.24□□□□□ -1.09
TPM3-221ENST00000513769 PLPPR1Q8TBJ4 325 aa8.24□□□□□ -1.09
TPM3-221ENST00000513769 MAFIPQ8WZ33 124 aa8.24□□□□□ -1.09
TPM3-221ENST00000513769 DMRTB1Q96MA1 342 aa8.24□□□□□ -1.09
TPM3-221ENST00000513769 KRTAP4-12Q9BQ66 201 aa8.24□□□□□ -1.09
TPM3-221ENST00000513769 SUCNR1Q9BXA5 334 aa8.24□□□□□ -1.09
TPM3-221ENST00000513769 RAB18Q9NP72 206 aa8.24□□□□□ -1.09
TPM3-221ENST00000513769 TAS2R3Q9NYW6 316 aa8.24□□□□□ -1.09
TPM3-221ENST00000513769 LPAR3Q9UBY5 353 aa8.24□□□□□ -1.09
TPM3-221ENST00000513769 MAB21L2Q9Y586 359 aa8.24□□□□□ -1.09
TPM3-221ENST00000513769 MYO9AB2RTY4 2548 aa8.24□□□□□ -1.09
TPM3-221ENST00000513769 IGHV3-64DA0A0J9YX35 117 aa8.23□□□□□ -1.09
TPM3-221ENST00000513769 CRYM-AS1A6NIL9 109 aa8.23□□□□□ -1.09
TPM3-221ENST00000513769 GPR31O00270 319 aa8.23□□□□□ -1.09
TPM3-221ENST00000513769 HSPB6O14558 160 aa8.23□□□□□ -1.09
TPM3-221ENST00000513769 YPEL1O60688 119 aa8.23□□□□□ -1.09
TPM3-221ENST00000513769 IFNA2P01563 188 aa8.23□□□□□ -1.09
TPM3-221ENST00000513769 HLA-AP01891 365 aaKnown RBP8.23□□□□□ -1.09
TPM3-221ENST00000513769 GIPP09681 153 aaPredicted RBP8.23□□□□□ -1.09
TPM3-221ENST00000513769 EGR1P18146 543 aa8.23□□□□□ -1.09
TPM3-221ENST00000513769 CD34P28906 385 aa8.23□□□□□ -1.09
TPM3-221ENST00000513769 IL2RGP31785 369 aa8.23□□□□□ -1.09
TPM3-221ENST00000513769 CEACAM6P40199 344 aa8.23□□□□□ -1.09
TPM3-221ENST00000513769 LUMP51884 338 aaPredicted RBP8.23□□□□□ -1.09
TPM3-221ENST00000513769 GMFBP60983 142 aa8.23□□□□□ -1.09
TPM3-221ENST00000513769 SRPXP78539 464 aa8.23□□□□□ -1.09
TPM3-221ENST00000513769 CD83Q01151 205 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms