RNA–Protein interactions for RNA: ENST00000513248.1

NUP54-212, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 531 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-212ENST00000513248 VENTXO95231 258 aa2.83□□□□□ -1.96
NUP54-212ENST00000513248 GYPAP02724 150 aa2.83□□□□□ -1.96
NUP54-212ENST00000513248 WNT2P09544 360 aa2.83□□□□□ -1.96
NUP54-212ENST00000513248 CCDC159P0C7I6 412 aa2.83□□□□□ -1.96
NUP54-212ENST00000513248 FASP25445 335 aa2.83□□□□□ -1.96
NUP54-212ENST00000513248 RBMXP38159 391 aaKnown RBP2.83□□□□□ -1.96
NUP54-212ENST00000513248 CD200P41217 278 aa2.83□□□□□ -1.96
NUP54-212ENST00000513248 GABRA2P47869 451 aa2.83□□□□□ -1.96
NUP54-212ENST00000513248 RIDAP52758 137 aaKnown RBP2.83□□□□□ -1.96
NUP54-212ENST00000513248 CRISP1P54107 249 aa2.83□□□□□ -1.96
NUP54-212ENST00000513248 IL5RAQ01344 420 aa2.83□□□□□ -1.96
NUP54-212ENST00000513248 ZNF154Q13106 437 aa2.83□□□□□ -1.96
NUP54-212ENST00000513248 MPPED2Q15777 294 aa2.83□□□□□ -1.96
NUP54-212ENST00000513248 MICBQ29980 383 aa2.83□□□□□ -1.96
NUP54-212ENST00000513248 ZNF829Q3KNS6 432 aaPredicted RBP2.83□□□□□ -1.96
NUP54-212ENST00000513248 TMEM255AQ5JRV8 349 aa2.83□□□□□ -1.96
NUP54-212ENST00000513248 FAM201AQ5SY85 155 aa2.83□□□□□ -1.96
NUP54-212ENST00000513248 GPR157Q5UAW9 335 aa2.83□□□□□ -1.96
NUP54-212ENST00000513248 METTL11BQ5VVY1 283 aa2.83□□□□□ -1.96
NUP54-212ENST00000513248 Q6ZR54 194 aa2.83□□□□□ -1.96
NUP54-212ENST00000513248 CCDC121Q6ZUS5 278 aa2.83□□□□□ -1.96
NUP54-212ENST00000513248 KCTD9Q7L273 389 aa2.83□□□□□ -1.96
NUP54-212ENST00000513248 SLC36A1Q7Z2H8 476 aa2.83□□□□□ -1.96
NUP54-212ENST00000513248 HS3ST5Q8IZT8 346 aa2.83□□□□□ -1.96
NUP54-212ENST00000513248 SIGLECL1Q8N7X8 197 aa2.83□□□□□ -1.96
NUP54-212ENST00000513248 OR52H1Q8NGJ2 320 aa2.83□□□□□ -1.96
NUP54-212ENST00000513248 OR5K1Q8NHB7 308 aa2.83□□□□□ -1.96
NUP54-212ENST00000513248 RNASE8Q8TDE3 154 aaKnown RBP2.83□□□□□ -1.96
NUP54-212ENST00000513248 LRRC29Q8WV35 223 aa2.83□□□□□ -1.96
NUP54-212ENST00000513248 ASB17Q8WXJ9 295 aa2.83□□□□□ -1.96
NUP54-212ENST00000513248 RNF170Q96K19 258 aa2.83□□□□□ -1.96
NUP54-212ENST00000513248 RAB40CQ96S21 281 aa2.83□□□□□ -1.96
NUP54-212ENST00000513248 TMEM246Q9BRR3 403 aa2.83□□□□□ -1.96
NUP54-212ENST00000513248 MROQ9BYG7 248 aa2.83□□□□□ -1.96
NUP54-212ENST00000513248 TTTY10Q9BZA0 68 aa2.83□□□□□ -1.96
NUP54-212ENST00000513248 RIBC2Q9H4K1 309 aa2.83□□□□□ -1.96
NUP54-212ENST00000513248 RGCCQ9H4X1 137 aa2.83□□□□□ -1.96
NUP54-212ENST00000513248 NIPAL2Q9H841 368 aa2.83□□□□□ -1.96
NUP54-212ENST00000513248 MOB1AQ9H8S9 216 aa2.83□□□□□ -1.96
NUP54-212ENST00000513248 PLEKHA3Q9HB20 300 aa2.83□□□□□ -1.96
NUP54-212ENST00000513248 PLEKHA1Q9HB21 404 aa2.83□□□□□ -1.96
NUP54-212ENST00000513248 ABCB9Q9NP78 766 aa2.83□□□□□ -1.96
NUP54-212ENST00000513248 IMPAD1Q9NX62 359 aa2.83□□□□□ -1.96
NUP54-212ENST00000513248 VNN3Q9NY84 501 aa2.83□□□□□ -1.96
NUP54-212ENST00000513248 ONECUT1Q9UBC0 465 aa2.83□□□□□ -1.96
NUP54-212ENST00000513248 NUP50Q9UKX7 468 aa2.83□□□□□ -1.96
NUP54-212ENST00000513248 TP53TG3Q9ULZ0 132 aa2.83□□□□□ -1.96
NUP54-212ENST00000513248 POMPQ9Y244 141 aa2.83□□□□□ -1.96
NUP54-212ENST00000513248 FOXA2Q9Y261 457 aaPredicted RBP2.83□□□□□ -1.96
NUP54-212ENST00000513248 INSIG2Q9Y5U4 225 aa2.83□□□□□ -1.96
NUP54-212ENST00000513248 TMEM14AQ9Y6G1 99 aa2.83□□□□□ -1.96
NUP54-212ENST00000513248 NBEAL2Q6ZNJ1 2754 aa2.83□□□□□ -1.96
NUP54-212ENST00000513248 USF3Q68DE3 2245 aa2.83□□□□□ -1.96
NUP54-212ENST00000513248 PPIAL4CA0A0B4J2A2 164 aa2.82□□□□□ -1.96
NUP54-212ENST00000513248 IGHV2-70DA0A0C4DH43 119 aa2.82□□□□□ -1.96
NUP54-212ENST00000513248 ZNF816-ZNF321PA0A0X1KG74 233 aa2.82□□□□□ -1.96
NUP54-212ENST00000513248 TMEM269A0A1B0GVZ9 245 aa2.82□□□□□ -1.96
NUP54-212ENST00000513248 TCRBV3S1A0A5B6 114 aa2.82□□□□□ -1.96
NUP54-212ENST00000513248 LOC110117498-PIK3R3F6TDL0 507 aa2.82□□□□□ -1.96
NUP54-212ENST00000513248 TRAPPC2LH3BP13 241 aa2.82□□□□□ -1.96
NUP54-212ENST00000513248 CDIPTO14735 213 aa2.82□□□□□ -1.96
NUP54-212ENST00000513248 PHYHO14832 338 aa2.82□□□□□ -1.96
NUP54-212ENST00000513248 RPP14O95059 124 aaKnown RBP2.82□□□□□ -1.96
NUP54-212ENST00000513248 CYB5AP00167 134 aa2.82□□□□□ -1.96
NUP54-212ENST00000513248 PAHP00439 452 aa2.82□□□□□ -1.96
NUP54-212ENST00000513248 KRT8P05787 483 aa2.82□□□□□ -1.96
NUP54-212ENST00000513248 MELTFP08582 738 aa2.82□□□□□ -1.96
NUP54-212ENST00000513248 PMELP40967 661 aa2.82□□□□□ -1.96
NUP54-212ENST00000513248 HCCSP53701 268 aa2.82□□□□□ -1.96
NUP54-212ENST00000513248 FGF12P61328 243 aa2.82□□□□□ -1.96
NUP54-212ENST00000513248 RPS27AP62979 156 aaKnown RBP2.82□□□□□ -1.96
NUP54-212ENST00000513248 FAM3AP98173 230 aa2.82□□□□□ -1.96
NUP54-212ENST00000513248 PRDX4Q13162 271 aa2.82□□□□□ -1.96
NUP54-212ENST00000513248 MAB21L1Q13394 359 aa2.82□□□□□ -1.96
NUP54-212ENST00000513248 PTGES3Q15185 160 aaKnown RBP2.82□□□□□ -1.96
NUP54-212ENST00000513248 PCK2Q16822 640 aa2.82□□□□□ -1.96
NUP54-212ENST00000513248 ZNF181Q2M3W8 571 aa2.82□□□□□ -1.96
NUP54-212ENST00000513248 KRTAP13-3Q3SY46 172 aa2.82□□□□□ -1.96
NUP54-212ENST00000513248 ZNF404Q494X3 552 aa2.82□□□□□ -1.96
NUP54-212ENST00000513248 LRRC10Q5BKY1 277 aa2.82□□□□□ -1.96
NUP54-212ENST00000513248 TEX30Q5JUR7 227 aa2.82□□□□□ -1.96
NUP54-212ENST00000513248 ZNF684Q5T5D7 378 aa2.82□□□□□ -1.96
NUP54-212ENST00000513248 BCL2L15Q5TBC7 163 aa2.82□□□□□ -1.96
NUP54-212ENST00000513248 PLCXD3Q63HM9 321 aa2.82□□□□□ -1.96
NUP54-212ENST00000513248 WDR25Q64LD2 544 aaPredicted RBP2.82□□□□□ -1.96
NUP54-212ENST00000513248 LYPD2Q6UXB3 125 aa2.82□□□□□ -1.96
NUP54-212ENST00000513248 ZNF826PQ6ZT77 177 aa2.82□□□□□ -1.96
NUP54-212ENST00000513248 FAM220AQ7Z4H9 259 aa2.82□□□□□ -1.96
NUP54-212ENST00000513248 TMEM179BQ7Z7N9 219 aa2.82□□□□□ -1.96
NUP54-212ENST00000513248 GID4Q8IVV7 300 aa2.82□□□□□ -1.96
NUP54-212ENST00000513248 PDZD9Q8IXQ8 264 aa2.82□□□□□ -1.96
NUP54-212ENST00000513248 C10orf67Q8IYJ2 551 aa2.82□□□□□ -1.96
NUP54-212ENST00000513248 PARP8Q8N3A8 854 aa2.82□□□□□ -1.96
NUP54-212ENST00000513248 GVQW1Q8N7I0 195 aa2.82□□□□□ -1.96
NUP54-212ENST00000513248 YIPF7Q8N8F6 280 aa2.82□□□□□ -1.96
NUP54-212ENST00000513248 BBS1Q8NFJ9 593 aa2.82□□□□□ -1.96
NUP54-212ENST00000513248 OR8B12Q8NGG6 310 aa2.82□□□□□ -1.96
NUP54-212ENST00000513248 OR51G2Q8NGK0 314 aa2.82□□□□□ -1.96
NUP54-212ENST00000513248 OTOSQ8NHW6 89 aa2.82□□□□□ -1.96
NUP54-212ENST00000513248 ZNF671Q8TAW3 534 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms