RNA–Protein interactions for RNA: ENST00000512334.5

DDX41-214, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 686 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-214ENST00000512334 TPTE2P1Q5T6R2 138 aa12.82□□□□□ -0.36
DDX41-214ENST00000512334 OR10X1Q8NGY0 326 aa12.82□□□□□ -0.36
DDX41-214ENST00000512334 RPEQ96AT9 228 aa12.82□□□□□ -0.36
DDX41-214ENST00000512334 FAM3DQ96BQ1 224 aa12.82□□□□□ -0.36
DDX41-214ENST00000512334 SULT4A1Q9BR01 284 aa12.82□□□□□ -0.36
DDX41-214ENST00000512334 FAAP24Q9BTP7 215 aa12.82□□□□□ -0.36
DDX41-214ENST00000512334 LPAR5Q9H1C0 372 aa12.82□□□□□ -0.36
DDX41-214ENST00000512334 PLEKHJ1Q9NW61 149 aa12.82□□□□□ -0.36
DDX41-214ENST00000512334 STUB1Q9UNE7 303 aa12.82□□□□□ -0.36
DDX41-214ENST00000512334 SSR3Q9UNL2 185 aa12.82□□□□□ -0.36
DDX41-214ENST00000512334 A0A0A6YYD4 124 aa12.81□□□□□ -0.36
DDX41-214ENST00000512334 SHISA3A0PJX4 238 aa12.81□□□□□ -0.36
DDX41-214ENST00000512334 A6NDX4 124 aa12.81□□□□□ -0.36
DDX41-214ENST00000512334 CHST1O43916 411 aa12.81□□□□□ -0.36
DDX41-214ENST00000512334 TSPAN9O75954 239 aa12.81□□□□□ -0.36
DDX41-214ENST00000512334 RCC1P18754 421 aaPredicted RBP12.81□□□□□ -0.36
DDX41-214ENST00000512334 RAB3BP20337 219 aa12.81□□□□□ -0.36
DDX41-214ENST00000512334 BRS3P32247 399 aa12.81□□□□□ -0.36
DDX41-214ENST00000512334 DYNLT3P51808 116 aa12.81□□□□□ -0.36
DDX41-214ENST00000512334 C2orf76Q3KRA6 126 aa12.81□□□□□ -0.36
DDX41-214ENST00000512334 CCDC144NLQ6NUI1 221 aa12.81□□□□□ -0.36
DDX41-214ENST00000512334 TRAT1Q6PIZ9 186 aa12.81□□□□□ -0.36
DDX41-214ENST00000512334 CCBE1Q6UXH8 406 aaPredicted RBP12.81□□□□□ -0.36
DDX41-214ENST00000512334 SLC16A12Q6ZSM3 486 aa12.81□□□□□ -0.36
DDX41-214ENST00000512334 OR4C13Q8NGP0 309 aa12.81□□□□□ -0.36
DDX41-214ENST00000512334 TOMM40LQ969M1 308 aa12.81□□□□□ -0.36
DDX41-214ENST00000512334 NPFFR1Q9GZQ6 430 aa12.81□□□□□ -0.36
DDX41-214ENST00000512334 C16orf95Q9H693 158 aa12.81□□□□□ -0.36
DDX41-214ENST00000512334 CHMP1AQ9HD42 196 aaPredicted RBP12.81□□□□□ -0.36
DDX41-214ENST00000512334 TXNL4BQ9NX01 149 aaKnown RBP12.81□□□□□ -0.36
DDX41-214ENST00000512334 KCNIP1Q9NZI2 227 aa12.81□□□□□ -0.36
DDX41-214ENST00000512334 GNG12Q9UBI6 72 aa12.81□□□□□ -0.36
DDX41-214ENST00000512334 ANK2Q01484 3957 aa12.81□□□□□ -0.36
DDX41-214ENST00000512334 SMIM30A4D0T7 59 aa12.8□□□□□ -0.36
DDX41-214ENST00000512334 SOCS1O15524 211 aa12.8□□□□□ -0.36
DDX41-214ENST00000512334 HBZP02008 142 aa12.8□□□□□ -0.36
DDX41-214ENST00000512334 CD24P25063 80 aa12.8□□□□□ -0.36
DDX41-214ENST00000512334 MNDAP41218 407 aa12.8□□□□□ -0.36
DDX41-214ENST00000512334 VEGFCP49767 419 aa12.8□□□□□ -0.36
DDX41-214ENST00000512334 MADCAM1Q13477 382 aa12.8□□□□□ -0.36
DDX41-214ENST00000512334 GAPTQ8N292 157 aa12.8□□□□□ -0.36
DDX41-214ENST00000512334 OR52M1Q8NGK5 317 aa12.8□□□□□ -0.36
DDX41-214ENST00000512334 OR1L1Q8NH94 360 aa12.8□□□□□ -0.36
DDX41-214ENST00000512334 MRPL30Q8TCC3 161 aaKnown RBP12.8□□□□□ -0.36
DDX41-214ENST00000512334 WFDC12Q8WWY7 111 aa12.8□□□□□ -0.36
DDX41-214ENST00000512334 TAF9BQ9HBM6 251 aa12.8□□□□□ -0.36
DDX41-214ENST00000512334 GFOD1Q9NXC2 390 aa12.8□□□□□ -0.36
DDX41-214ENST00000512334 TENM1Q9UKZ4 2725 aa12.8□□□□□ -0.36
DDX41-214ENST00000512334 TMEM272A0A1B0GTI8 110 aa12.79□□□□□ -0.36
DDX41-214ENST00000512334 IFITM5A6NNB3 132 aa12.79□□□□□ -0.36
DDX41-214ENST00000512334 OOSP1A8MZH6 123 aa12.79□□□□□ -0.36
DDX41-214ENST00000512334 LY6LH3BQJ8 138 aa12.79□□□□□ -0.36
DDX41-214ENST00000512334 TNFAIP8O95379 198 aa12.79□□□□□ -0.36
DDX41-214ENST00000512334 FGF9P31371 208 aaPredicted RBP12.79□□□□□ -0.36
DDX41-214ENST00000512334 LOXL3P58215 753 aa12.79□□□□□ -0.36
DDX41-214ENST00000512334 FAM53AQ6NSI3 398 aaPredicted RBP12.79□□□□□ -0.36
DDX41-214ENST00000512334 OR10V1Q8NGI7 309 aa12.79□□□□□ -0.36
DDX41-214ENST00000512334 SETD6Q8TBK2 473 aa12.79□□□□□ -0.36
DDX41-214ENST00000512334 CHCHD6Q9BRQ6 235 aa12.79□□□□□ -0.36
DDX41-214ENST00000512334 OR51E2Q9H255 320 aa12.79□□□□□ -0.36
DDX41-214ENST00000512334 MBNL3Q9NUK0 354 aaKnown RBP12.79□□□□□ -0.36
DDX41-214ENST00000512334 SIGLEC9Q9Y336 463 aa12.79□□□□□ -0.36
DDX41-214ENST00000512334 CD36P16671 472 aa12.78□□□□□ -0.36
DDX41-214ENST00000512334 SRSF4Q08170 494 aaKnown RBP12.78□□□□□ -0.36
DDX41-214ENST00000512334 FAM89BQ8N5H3 189 aa12.78□□□□□ -0.36
DDX41-214ENST00000512334 TSPAN14Q8NG11 270 aa12.78□□□□□ -0.36
DDX41-214ENST00000512334 OR56B1Q8NGI3 324 aa12.78□□□□□ -0.36
DDX41-214ENST00000512334 OR2T6Q8NHC8 308 aa12.78□□□□□ -0.36
DDX41-214ENST00000512334 CAPSLQ8WWF8 208 aa12.78□□□□□ -0.36
DDX41-214ENST00000512334 RANBP3Q9H6Z4 567 aaPredicted RBP12.78□□□□□ -0.36
DDX41-214ENST00000512334 LIN7BQ9HAP6 207 aa12.78□□□□□ -0.36
DDX41-214ENST00000512334 VCX3AQ9NNX9 186 aa12.78□□□□□ -0.36
DDX41-214ENST00000512334 OR2S2Q9NQN1 319 aa12.78□□□□□ -0.36
DDX41-214ENST00000512334 FBLN5Q9UBX5 448 aa12.78□□□□□ -0.36
DDX41-214ENST00000512334 RAB22AQ9UL26 194 aa12.78□□□□□ -0.36
DDX41-214ENST00000512334 A0A087WXM4 84 aa12.77□□□□□ -0.37
DDX41-214ENST00000512334 A0A0B4J203 849 aa12.77□□□□□ -0.37
DDX41-214ENST00000512334 LOC100506127A0A0U1RQW1 187 aa12.77□□□□□ -0.37
DDX41-214ENST00000512334 LDLRAD4O15165 306 aa12.77□□□□□ -0.37
DDX41-214ENST00000512334 RRP9O43818 475 aaKnown RBP12.77□□□□□ -0.37
DDX41-214ENST00000512334 GADD45AP24522 165 aa12.77□□□□□ -0.37
DDX41-214ENST00000512334 IL3RAP26951 378 aa12.77□□□□□ -0.37
DDX41-214ENST00000512334 KIR2DS4P43632 304 aa12.77□□□□□ -0.37
DDX41-214ENST00000512334 PROK1P58294 105 aa12.77□□□□□ -0.37
DDX41-214ENST00000512334 PLA2G7Q13093 441 aa12.77□□□□□ -0.37
DDX41-214ENST00000512334 DIAPH2-AS1Q14236 149 aa12.77□□□□□ -0.37
DDX41-214ENST00000512334 TMEM30BQ3MIR4 351 aa12.77□□□□□ -0.37
DDX41-214ENST00000512334 ARSJQ5FYB0 599 aaPredicted RBP12.77□□□□□ -0.37
DDX41-214ENST00000512334 Q6ZTK2 550 aa12.77□□□□□ -0.37
DDX41-214ENST00000512334 C5orf24Q7Z6I8 188 aa12.77□□□□□ -0.37
DDX41-214ENST00000512334 ZNF554Q86TJ5 538 aa12.77□□□□□ -0.37
DDX41-214ENST00000512334 NR2C2APQ86WQ0 139 aa12.77□□□□□ -0.37
DDX41-214ENST00000512334 LINC00311Q8N616 119 aa12.77□□□□□ -0.37
DDX41-214ENST00000512334 DTX3Q8N9I9 347 aa12.77□□□□□ -0.37
DDX41-214ENST00000512334 SGMS2Q8NHU3 365 aa12.77□□□□□ -0.37
DDX41-214ENST00000512334 ARHGAP5-AS1Q96IT6 56 aa12.77□□□□□ -0.37
DDX41-214ENST00000512334 KCTD7Q96MP8 289 aa12.77□□□□□ -0.37
DDX41-214ENST00000512334 ABRACLQ9P1F3 81 aa12.77□□□□□ -0.37
DDX41-214ENST00000512334 AK3Q9UIJ7 227 aa12.77□□□□□ -0.37
DDX41-214ENST00000512334 NOTOA8MTQ0 251 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms