RNA–Protein interactions for RNA: ENST00000511313.5

POLR2J3-215, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best) BASIC

Gene POLR2J3, Length 4,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-215ENST00000511313 SLC35A2P78381 396 aa8.15□□□□□ -1.1
POLR2J3-215ENST00000511313 TMEM177Q53S58 311 aa8.15□□□□□ -1.1
POLR2J3-215ENST00000511313 ATPAF1Q5TC12 328 aaPredicted RBP8.15□□□□□ -1.1
POLR2J3-215ENST00000511313 OR5M8Q8NGP6 311 aa8.15□□□□□ -1.1
POLR2J3-215ENST00000511313 HELTA6NFD8 242 aa8.15□□□□□ -1.11
POLR2J3-215ENST00000511313 XRCC3O43542 346 aa8.15□□□□□ -1.11
POLR2J3-215ENST00000511313 ETV1P50549 477 aa8.15□□□□□ -1.11
POLR2J3-215ENST00000511313 S100A10P60903 97 aa8.15□□□□□ -1.11
POLR2J3-215ENST00000511313 NUTF2P61970 127 aaKnown RBP8.15□□□□□ -1.11
POLR2J3-215ENST00000511313 TNXAQ16473 311 aa8.15□□□□□ -1.11
POLR2J3-215ENST00000511313 UNQ5815/PRO19632Q6UWF5 114 aa8.15□□□□□ -1.11
POLR2J3-215ENST00000511313 Q8N402 240 aa8.15□□□□□ -1.11
POLR2J3-215ENST00000511313 TMEM204Q9BSN7 226 aa8.15□□□□□ -1.11
POLR2J3-215ENST00000511313 SYNPO2LQ9H987 977 aa8.15□□□□□ -1.11
POLR2J3-215ENST00000511313 FBXL17Q9UF56 701 aa8.15□□□□□ -1.11
POLR2J3-215ENST00000511313 CRYM-AS1A6NIL9 109 aa8.14□□□□□ -1.11
POLR2J3-215ENST00000511313 EFNA2O43921 213 aa8.14□□□□□ -1.11
POLR2J3-215ENST00000511313 RAMP1O60894 148 aa8.14□□□□□ -1.11
POLR2J3-215ENST00000511313 HGFACQ04756 655 aa8.14□□□□□ -1.11
POLR2J3-215ENST00000511313 RNASE12Q5GAN4 147 aaKnown RBP8.14□□□□□ -1.11
POLR2J3-215ENST00000511313 SPNS2Q8IVW8 549 aa8.14□□□□□ -1.11
POLR2J3-215ENST00000511313 IQCF2Q8IXL9 164 aa8.14□□□□□ -1.11
POLR2J3-215ENST00000511313 PINX1Q96BK5 328 aaKnown RBP8.14□□□□□ -1.11
POLR2J3-215ENST00000511313 NUDT15Q9NV35 164 aa8.14□□□□□ -1.11
POLR2J3-215ENST00000511313 KANTRA0A1W2PQU2 76 aa8.14□□□□□ -1.11
POLR2J3-215ENST00000511313 ZFPL1O95159 310 aa8.14□□□□□ -1.11
POLR2J3-215ENST00000511313 KCNIP4Q6PIL6 250 aa8.14□□□□□ -1.11
POLR2J3-215ENST00000511313 CASTOR1Q8WTX7 329 aa8.14□□□□□ -1.11
POLR2J3-215ENST00000511313 ABHD14BQ96IU4 210 aa8.14□□□□□ -1.11
POLR2J3-215ENST00000511313 GCM1Q9NP62 436 aa8.14□□□□□ -1.11
POLR2J3-215ENST00000511313 MRPL22Q9NWU5 206 aaKnown RBP8.14□□□□□ -1.11
POLR2J3-215ENST00000511313 MYLKQ15746 1914 aa8.14□□□□□ -1.11
POLR2J3-215ENST00000511313 ARID1BQ8NFD5 2236 aaPredicted RBP8.14□□□□□ -1.11
POLR2J3-215ENST00000511313 ADAM10O14672 748 aa8.14□□□□□ -1.11
POLR2J3-215ENST00000511313 H2AFB2P0C5Z0 115 aa8.14□□□□□ -1.11
POLR2J3-215ENST00000511313 FCGR2CP31995 323 aa8.14□□□□□ -1.11
POLR2J3-215ENST00000511313 ASPHD2Q6ICH7 369 aa8.14□□□□□ -1.11
POLR2J3-215ENST00000511313 TMEM229BQ8NBD8 167 aa8.14□□□□□ -1.11
POLR2J3-215ENST00000511313 OR10K1Q8NGX5 313 aa8.14□□□□□ -1.11
POLR2J3-215ENST00000511313 OR51H1Q8NH63 302 aa8.14□□□□□ -1.11
POLR2J3-215ENST00000511313 BIN3Q9NQY0 253 aa8.14□□□□□ -1.11
POLR2J3-215ENST00000511313 CLEC5AQ9NY25 188 aa8.14□□□□□ -1.11
POLR2J3-215ENST00000511313 TMEM131Q92545 1883 aa8.14□□□□□ -1.11
POLR2J3-215ENST00000511313 PSMB11A5LHX3 300 aa8.14□□□□□ -1.11
POLR2J3-215ENST00000511313 ACKR3P25106 362 aa8.14□□□□□ -1.11
POLR2J3-215ENST00000511313 NHLRC3Q5JS37 347 aa8.14□□□□□ -1.11
POLR2J3-215ENST00000511313 PARP11Q9NR21 331 aa8.14□□□□□ -1.11
POLR2J3-215ENST00000511313 UFC1Q9Y3C8 167 aa8.14□□□□□ -1.11
POLR2J3-215ENST00000511313 HSD17B6O14756 317 aa8.13□□□□□ -1.11
POLR2J3-215ENST00000511313 HPXP02790 462 aa8.13□□□□□ -1.11
POLR2J3-215ENST00000511313 RAG2P55895 527 aa8.13□□□□□ -1.11
POLR2J3-215ENST00000511313 HTD2P86397 168 aa8.13□□□□□ -1.11
POLR2J3-215ENST00000511313 RPEL1Q2QD12 228 aa8.13□□□□□ -1.11
POLR2J3-215ENST00000511313 SIRT7Q9NRC8 400 aa8.13□□□□□ -1.11
POLR2J3-215ENST00000511313 ING1Q9UK53 422 aaPredicted RBP8.13□□□□□ -1.11
POLR2J3-215ENST00000511313 OR2W1Q9Y3N9 320 aa8.13□□□□□ -1.11
POLR2J3-215ENST00000511313 SCN8AQ9UQD0 1980 aa8.13□□□□□ -1.11
POLR2J3-215ENST00000511313 PQLC2LA1A4F0 135 aa8.13□□□□□ -1.11
POLR2J3-215ENST00000511313 ITGB1BP1O14713 200 aa8.13□□□□□ -1.11
POLR2J3-215ENST00000511313 IGHV2-70P01814 119 aa8.13□□□□□ -1.11
POLR2J3-215ENST00000511313 IGHV2-5P01817 119 aa8.13□□□□□ -1.11
POLR2J3-215ENST00000511313 SULT1A3P0DMM9 295 aa8.13□□□□□ -1.11
POLR2J3-215ENST00000511313 SULT1A4P0DMN0 295 aa8.13□□□□□ -1.11
POLR2J3-215ENST00000511313 CD1BP29016 333 aa8.13□□□□□ -1.11
POLR2J3-215ENST00000511313 EXOSC2Q13868 293 aaKnown RBP8.13□□□□□ -1.11
POLR2J3-215ENST00000511313 C1orf100Q5SVJ3 147 aa8.13□□□□□ -1.11
POLR2J3-215ENST00000511313 GTSCR1Q86UQ5 136 aa8.13□□□□□ -1.11
POLR2J3-215ENST00000511313 TMEM147Q9BVK8 224 aa8.13□□□□□ -1.11
POLR2J3-215ENST00000511313 Q9N2K0 584 aa8.13□□□□□ -1.11
POLR2J3-215ENST00000511313 A6NHS1 94 aa8.13□□□□□ -1.11
POLR2J3-215ENST00000511313 TRAPPC2P0DI81 140 aa8.13□□□□□ -1.11
POLR2J3-215ENST00000511313 TRAPPC2BP0DI82 140 aa8.13□□□□□ -1.11
POLR2J3-215ENST00000511313 DUSP1P28562 367 aa8.13□□□□□ -1.11
POLR2J3-215ENST00000511313 HTR2BP41595 481 aa8.13□□□□□ -1.11
POLR2J3-215ENST00000511313 OR2B8PP59922 312 aa8.13□□□□□ -1.11
POLR2J3-215ENST00000511313 ARL16Q0P5N6 197 aa8.13□□□□□ -1.11
POLR2J3-215ENST00000511313 TEX38Q6PEX7 206 aa8.13□□□□□ -1.11
POLR2J3-215ENST00000511313 HEPN1Q6WQI6 88 aa8.13□□□□□ -1.11
POLR2J3-215ENST00000511313 SMIM15Q7Z3B0 74 aa8.13□□□□□ -1.11
POLR2J3-215ENST00000511313 THNSL2Q86YJ6 484 aa8.13□□□□□ -1.11
POLR2J3-215ENST00000511313 ABCG5Q9H222 651 aa8.13□□□□□ -1.11
POLR2J3-215ENST00000511313 ZNF222Q9UK12 451 aa8.13□□□□□ -1.11
POLR2J3-215ENST00000511313 LOC100509620A0A075B734 347 aa8.12□□□□□ -1.11
POLR2J3-215ENST00000511313 PHF1O43189 567 aaPredicted RBP8.12□□□□□ -1.11
POLR2J3-215ENST00000511313 PSG2P11465 335 aa8.12□□□□□ -1.11
POLR2J3-215ENST00000511313 WDR82Q6UXN9 313 aa8.12□□□□□ -1.11
POLR2J3-215ENST00000511313 SPAG16Q8N0X2 631 aa8.12□□□□□ -1.11
POLR2J3-215ENST00000511313 BPIFCQ8NFQ6 507 aa8.12□□□□□ -1.11
POLR2J3-215ENST00000511313 USMG5Q96IX5 58 aa8.12□□□□□ -1.11
POLR2J3-215ENST00000511313 SRSF8Q9BRL6 282 aaKnown RBP8.12□□□□□ -1.11
POLR2J3-215ENST00000511313 GSKIPQ9P0R6 139 aa8.12□□□□□ -1.11
POLR2J3-215ENST00000511313 STRAPQ9Y3F4 350 aaKnown RBP8.12□□□□□ -1.11
POLR2J3-215ENST00000511313 COL6A6A6NMZ7 2263 aa8.12□□□□□ -1.11
POLR2J3-215ENST00000511313 IGHV3-64DA0A0J9YX35 117 aa8.12□□□□□ -1.11
POLR2J3-215ENST00000511313 OR8U9P0C7N5 309 aa8.12□□□□□ -1.11
POLR2J3-215ENST00000511313 VSIG10L2P0DP72 767 aa8.12□□□□□ -1.11
POLR2J3-215ENST00000511313 RPS27P42677 84 aaKnown RBP8.12□□□□□ -1.11
POLR2J3-215ENST00000511313 PXDC1Q5TGL8 231 aa8.12□□□□□ -1.11
POLR2J3-215ENST00000511313 TEX36Q5VZQ5 186 aa8.12□□□□□ -1.11
POLR2J3-215ENST00000511313 B3GLCTQ6Y288 498 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms