RNA–Protein interactions for RNA: ENST00000510569.5

NUP54-209, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-209ENST00000510569 GOLGB1Q14789 3259 aaKnown RBP2.74□□□□□ -1.97
NUP54-209ENST00000510569 DAPL1A0PJW8 107 aa2.74□□□□□ -1.97
NUP54-209ENST00000510569 PQLC2LA1A4F0 135 aa2.74□□□□□ -1.97
NUP54-209ENST00000510569 ANKRD65E5RJM6 399 aa2.74□□□□□ -1.97
NUP54-209ENST00000510569 FCN1O00602 326 aa2.74□□□□□ -1.97
NUP54-209ENST00000510569 NME4O00746 187 aa2.74□□□□□ -1.97
NUP54-209ENST00000510569 TTC4O95801 387 aa2.74□□□□□ -1.97
NUP54-209ENST00000510569 MT-CO2P00403 227 aa2.74□□□□□ -1.97
NUP54-209ENST00000510569 FOLR1P15328 257 aa2.74□□□□□ -1.97
NUP54-209ENST00000510569 TAC1P20366 129 aa2.74□□□□□ -1.97
NUP54-209ENST00000510569 GRPRP30550 384 aa2.74□□□□□ -1.97
NUP54-209ENST00000510569 SDC4P31431 198 aa2.74□□□□□ -1.97
NUP54-209ENST00000510569 CCR7P32248 378 aa2.74□□□□□ -1.97
NUP54-209ENST00000510569 PYCR1P32322 319 aa2.74□□□□□ -1.97
NUP54-209ENST00000510569 RCVRNP35243 200 aa2.74□□□□□ -1.97
NUP54-209ENST00000510569 GPX4P36969 197 aaPredicted RBP2.74□□□□□ -1.97
NUP54-209ENST00000510569 PTGDSP41222 190 aa2.74□□□□□ -1.97
NUP54-209ENST00000510569 RAB13P51153 203 aa2.74□□□□□ -1.97
NUP54-209ENST00000510569 CCR6P51684 374 aa2.74□□□□□ -1.97
NUP54-209ENST00000510569 RAB38P57729 211 aa2.74□□□□□ -1.97
NUP54-209ENST00000510569 TCTAP57738 103 aa2.74□□□□□ -1.97
NUP54-209ENST00000510569 ARG2P78540 354 aa2.74□□□□□ -1.97
NUP54-209ENST00000510569 DEFA6Q01524 100 aa2.74□□□□□ -1.97
NUP54-209ENST00000510569 EIF4EBP1Q13541 118 aaPredicted RBP2.74□□□□□ -1.97
NUP54-209ENST00000510569 C4orf26Q17RF5 130 aa2.74□□□□□ -1.97
NUP54-209ENST00000510569 CLEC12BQ2HXU8 276 aa2.74□□□□□ -1.97
NUP54-209ENST00000510569 LRRC75BQ2VPJ9 315 aa2.74□□□□□ -1.97
NUP54-209ENST00000510569 SMIM21Q3B7S5 101 aa2.74□□□□□ -1.97
NUP54-209ENST00000510569 ZBED5Q49AG3 693 aa2.74□□□□□ -1.97
NUP54-209ENST00000510569 PVRIGQ6DKI7 326 aa2.74□□□□□ -1.97
NUP54-209ENST00000510569 PRSS41Q7RTY9 318 aa2.74□□□□□ -1.97
NUP54-209ENST00000510569 GLT6D1Q7Z4J2 308 aa2.74□□□□□ -1.97
NUP54-209ENST00000510569 TMEM150AQ86TG1 271 aa2.74□□□□□ -1.97
NUP54-209ENST00000510569 C10orf107Q8IVU9 208 aa2.74□□□□□ -1.97
NUP54-209ENST00000510569 OR4K17Q8NGC6 315 aa2.74□□□□□ -1.97
NUP54-209ENST00000510569 OR4C13Q8NGP0 309 aa2.74□□□□□ -1.97
NUP54-209ENST00000510569 OR9A2Q8NGT5 310 aa2.74□□□□□ -1.97
NUP54-209ENST00000510569 OR8U1Q8NH10 309 aa2.74□□□□□ -1.97
NUP54-209ENST00000510569 TNFAIP8L1Q8WVP5 186 aa2.74□□□□□ -1.97
NUP54-209ENST00000510569 C1orf54Q8WWF1 131 aa2.74□□□□□ -1.97
NUP54-209ENST00000510569 ASB17Q8WXJ9 295 aa2.74□□□□□ -1.97
NUP54-209ENST00000510569 EEF1AKMT3Q96AZ1 226 aa2.74□□□□□ -1.97
NUP54-209ENST00000510569 HAUS1Q96CS2 278 aa2.74□□□□□ -1.97
NUP54-209ENST00000510569 L3HYPDHQ96EM0 354 aa2.74□□□□□ -1.97
NUP54-209ENST00000510569 MRAP2Q96G30 205 aa2.74□□□□□ -1.97
NUP54-209ENST00000510569 MRPL48Q96GC5 212 aaKnown RBP2.74□□□□□ -1.97
NUP54-209ENST00000510569 PPP1R2P1Q96PQ5 205 aa2.74□□□□□ -1.97
NUP54-209ENST00000510569 NRTNQ99748 197 aa2.74□□□□□ -1.97
NUP54-209ENST00000510569 RASL11BQ9BPW5 248 aa2.74□□□□□ -1.97
NUP54-209ENST00000510569 KCTD14Q9BQ13 255 aaPredicted RBP2.74□□□□□ -1.97
NUP54-209ENST00000510569 CMSS1Q9BQ75 279 aaKnown RBP2.74□□□□□ -1.97
NUP54-209ENST00000510569 TCEAL7Q9BRU2 100 aa2.74□□□□□ -1.97
NUP54-209ENST00000510569 OR11A1Q9GZK7 315 aa2.74□□□□□ -1.97
NUP54-209ENST00000510569 ZNF442Q9H7R0 627 aa2.74□□□□□ -1.97
NUP54-209ENST00000510569 EXOSC4Q9NPD3 245 aaKnown RBP2.74□□□□□ -1.97
NUP54-209ENST00000510569 RGS18Q9NS28 235 aa2.74□□□□□ -1.97
NUP54-209ENST00000510569 GNPTGQ9UJJ9 305 aa2.74□□□□□ -1.97
NUP54-209ENST00000510569 CES1P1Q9UKY3 287 aa2.74□□□□□ -1.97
NUP54-209ENST00000510569 ING4Q9UNL4 249 aa2.74□□□□□ -1.97
NUP54-209ENST00000510569 ANGPT4Q9Y264 503 aa2.74□□□□□ -1.97
NUP54-209ENST00000510569 SIGLEC9Q9Y336 463 aa2.74□□□□□ -1.97
NUP54-209ENST00000510569 UFC1Q9Y3C8 167 aa2.74□□□□□ -1.97
NUP54-209ENST00000510569 L3MBTL1Q9Y468 752 aa2.74□□□□□ -1.97
NUP54-209ENST00000510569 KLF12Q9Y4X4 402 aa2.74□□□□□ -1.97
NUP54-209ENST00000510569 HEY1Q9Y5J3 304 aa2.74□□□□□ -1.97
NUP54-209ENST00000510569 MYH4Q9Y623 1939 aa2.74□□□□□ -1.97
NUP54-209ENST00000510569 FER1L6Q2WGJ9 1857 aa2.73□□□□□ -1.97
NUP54-209ENST00000510569 IGHV2OR16-5A0A0B4J2B6 119 aa2.73□□□□□ -1.97
NUP54-209ENST00000510569 PVALEFA0A1B0GWK0 134 aa2.73□□□□□ -1.97
NUP54-209ENST00000510569 IGSF23A1L1A6 192 aa2.73□□□□□ -1.97
NUP54-209ENST00000510569 ISPDA4D126 451 aa2.73□□□□□ -1.97
NUP54-209ENST00000510569 A6NDN8 102 aa2.73□□□□□ -1.97
NUP54-209ENST00000510569 FAM159BA6NKW6 160 aa2.73□□□□□ -1.97
NUP54-209ENST00000510569 FAM166BA8MTA8 275 aa2.73□□□□□ -1.97
NUP54-209ENST00000510569 CEACAM18A8MTB9 384 aa2.73□□□□□ -1.97
NUP54-209ENST00000510569 TNFRSF11BO00300 401 aa2.73□□□□□ -1.97
NUP54-209ENST00000510569 TXNDC9O14530 226 aa2.73□□□□□ -1.97
NUP54-209ENST00000510569 FKBP6O75344 327 aa2.73□□□□□ -1.97
NUP54-209ENST00000510569 ATG12O94817 140 aa2.73□□□□□ -1.97
NUP54-209ENST00000510569 SOX14O95416 240 aa2.73□□□□□ -1.97
NUP54-209ENST00000510569 GPR75O95800 540 aa2.73□□□□□ -1.97
NUP54-209ENST00000510569 PTTG1O95997 202 aa2.73□□□□□ -1.97
NUP54-209ENST00000510569 IFNA10P01566 189 aa2.73□□□□□ -1.97
NUP54-209ENST00000510569 IFNGP01579 166 aa2.73□□□□□ -1.97
NUP54-209ENST00000510569 SERPINA7P05543 415 aa2.73□□□□□ -1.97
NUP54-209ENST00000510569 MRPL3P09001 348 aaKnown RBP2.73□□□□□ -1.97
NUP54-209ENST00000510569 RBP1P09455 135 aa2.73□□□□□ -1.97
NUP54-209ENST00000510569 CYBAP13498 195 aa2.73□□□□□ -1.97
NUP54-209ENST00000510569 TCP1P17987 556 aaKnown RBP2.73□□□□□ -1.97
NUP54-209ENST00000510569 SDC1P18827 310 aa2.73□□□□□ -1.97
NUP54-209ENST00000510569 OMGP23515 440 aa2.73□□□□□ -1.97
NUP54-209ENST00000510569 AK4P27144 223 aaPredicted RBP2.73□□□□□ -1.97
NUP54-209ENST00000510569 TALDO1P37837 337 aa2.73□□□□□ -1.97
NUP54-209ENST00000510569 RND3P61587 244 aa2.73□□□□□ -1.97
NUP54-209ENST00000510569 GNG11P61952 73 aa2.73□□□□□ -1.97
NUP54-209ENST00000510569 NUTF2P61970 127 aaKnown RBP2.73□□□□□ -1.97
NUP54-209ENST00000510569 PPP1CBP62140 327 aa2.73□□□□□ -1.97
NUP54-209ENST00000510569 HIST1H3AP68431 136 aa2.73□□□□□ -1.97
NUP54-209ENST00000510569 H3F3AP84243 136 aa2.73□□□□□ -1.97
NUP54-209ENST00000510569 FMODQ06828 376 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms