RNA–Protein interactions for RNA: ENST00000509769.5

USP53-205, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 1 (best)

Gene USP53, Length 4,803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-205ENST00000509769 CDC42EP5Q6NZY7 148 aa3.15□□□□□ -1.9
USP53-205ENST00000509769 ACSM6Q6P461 480 aa3.15□□□□□ -1.9
USP53-205ENST00000509769 PRRT2Q7Z6L0 340 aaPredicted RBP3.15□□□□□ -1.9
USP53-205ENST00000509769 C1orf174Q8IYL3 243 aa3.15□□□□□ -1.9
USP53-205ENST00000509769 PIGTQ969N2 578 aa3.15□□□□□ -1.9
USP53-205ENST00000509769 FMC1Q96HJ9 113 aa3.15□□□□□ -1.9
USP53-205ENST00000509769 DERL3Q96Q80 235 aa3.15□□□□□ -1.9
USP53-205ENST00000509769 GGTLC1Q9BX51 225 aa3.15□□□□□ -1.9
USP53-205ENST00000509769 GNB1LQ9BYB4 327 aa3.15□□□□□ -1.9
USP53-205ENST00000509769 PARP12Q9H0J9 701 aaKnown RBP3.15□□□□□ -1.9
USP53-205ENST00000509769 FAM234AQ9H0X4 552 aa3.15□□□□□ -1.9
USP53-205ENST00000509769 OSER1Q9NX31 292 aa3.15□□□□□ -1.9
USP53-205ENST00000509769 SIGLEC7Q9Y286 467 aa3.15□□□□□ -1.9
USP53-205ENST00000509769 AMMECR1Q9Y4X0 333 aaPredicted RBP3.15□□□□□ -1.9
USP53-205ENST00000509769 LY96Q9Y6Y9 160 aa3.15□□□□□ -1.9
USP53-205ENST00000509769 LOC107986453A0A1B0GWG9 222 aa3.15□□□□□ -1.91
USP53-205ENST00000509769 A0A1W2PRF3 423 aa3.15□□□□□ -1.91
USP53-205ENST00000509769 A0A1W2PRM7 423 aa3.15□□□□□ -1.91
USP53-205ENST00000509769 ZNF860A6NHJ4 632 aa3.15□□□□□ -1.91
USP53-205ENST00000509769 KNCNA6PVL3 124 aa3.15□□□□□ -1.91
USP53-205ENST00000509769 H7C1H1 209 aa3.15□□□□□ -1.91
USP53-205ENST00000509769 REG1AP05451 166 aa3.15□□□□□ -1.91
USP53-205ENST00000509769 PRSS56P0CW18 603 aa3.15□□□□□ -1.91
USP53-205ENST00000509769 ACP1P24666 158 aa3.15□□□□□ -1.91
USP53-205ENST00000509769 CST5P28325 142 aaPredicted RBP3.15□□□□□ -1.91
USP53-205ENST00000509769 GPX4P36969 197 aaPredicted RBP3.15□□□□□ -1.91
USP53-205ENST00000509769 LPAR6P43657 344 aa3.15□□□□□ -1.91
USP53-205ENST00000509769 DLX6P56179 175 aa3.15□□□□□ -1.91
USP53-205ENST00000509769 TNFAIP6P98066 277 aaPredicted RBP3.15□□□□□ -1.91
USP53-205ENST00000509769 EWSR1Q01844 656 aaKnown RBP eCLIP3.15□□□□□ -1.91
USP53-205ENST00000509769 EXOSC7Q15024 291 aaKnown RBP3.15□□□□□ -1.91
USP53-205ENST00000509769 PDGFRLQ15198 375 aa3.15□□□□□ -1.91
USP53-205ENST00000509769 ZNF141Q15928 474 aa3.15□□□□□ -1.91
USP53-205ENST00000509769 C9orf50Q5SZB4 431 aa3.15□□□□□ -1.91
USP53-205ENST00000509769 RBPMS2Q6ZRY4 209 aaKnown RBP3.15□□□□□ -1.91
USP53-205ENST00000509769 RFLNAQ6ZTI6 216 aa3.15□□□□□ -1.91
USP53-205ENST00000509769 AMER3Q8N944 861 aa3.15□□□□□ -1.91
USP53-205ENST00000509769 IL1F10Q8WWZ1 152 aa3.15□□□□□ -1.91
USP53-205ENST00000509769 PEX11GQ96HA9 241 aa3.15□□□□□ -1.91
USP53-205ENST00000509769 QTRT1Q9BXR0 403 aaKnown RBP3.15□□□□□ -1.91
USP53-205ENST00000509769 KLK14Q9P0G3 267 aa3.15□□□□□ -1.91
USP53-205ENST00000509769 CD84Q9UIB8 345 aa3.15□□□□□ -1.91
USP53-205ENST00000509769 KCNE1BA0A087WTH5 132 aa3.15□□□□□ -1.91
USP53-205ENST00000509769 TRBV4-1A0A0J9YWV2 114 aa3.15□□□□□ -1.91
USP53-205ENST00000509769 MED19A0JLT2 244 aaPredicted RBP3.15□□□□□ -1.91
USP53-205ENST00000509769 SLC25A20O43772 301 aa3.15□□□□□ -1.91
USP53-205ENST00000509769 TNFRSF6BO95407 300 aa3.15□□□□□ -1.91
USP53-205ENST00000509769 NGFP01138 241 aa3.15□□□□□ -1.91
USP53-205ENST00000509769 ACRP10323 421 aa3.15□□□□□ -1.91
USP53-205ENST00000509769 PXNP49023 591 aaPredicted RBP3.15□□□□□ -1.91
USP53-205ENST00000509769 PSG9Q00887 426 aa3.15□□□□□ -1.91
USP53-205ENST00000509769 IFITM2Q01629 132 aa3.15□□□□□ -1.91
USP53-205ENST00000509769 SLC25A35Q3KQZ1 300 aa3.15□□□□□ -1.91
USP53-205ENST00000509769 IBA57Q5T440 356 aaKnown RBP3.15□□□□□ -1.91
USP53-205ENST00000509769 ZNF324BQ6AW86 544 aaPredicted RBP3.15□□□□□ -1.91
USP53-205ENST00000509769 TMEM211Q6ICI0 200 aa3.15□□□□□ -1.91
USP53-205ENST00000509769 ZNF774Q6NX45 483 aa3.15□□□□□ -1.91
USP53-205ENST00000509769 OSR2Q8N2R0 312 aa3.15□□□□□ -1.91
USP53-205ENST00000509769 OR8B12Q8NGG6 310 aa3.15□□□□□ -1.91
USP53-205ENST00000509769 MARS2Q96GW9 593 aaKnown RBP3.15□□□□□ -1.91
USP53-205ENST00000509769 Q96M85 177 aa3.15□□□□□ -1.91
USP53-205ENST00000509769 OXGR1Q96P68 337 aa3.15□□□□□ -1.91
USP53-205ENST00000509769 LINC00470Q9BZP3 86 aa3.15□□□□□ -1.91
USP53-205ENST00000509769 DLL3Q9NYJ7 618 aa3.15□□□□□ -1.91
USP53-205ENST00000509769 INSL5Q9Y5Q6 135 aa3.15□□□□□ -1.91
USP53-205ENST00000509769 MYH7BA7E2Y1 1941 aa3.15□□□□□ -1.91
USP53-205ENST00000509769 A0A1W2PR48 441 aa3.14□□□□□ -1.91
USP53-205ENST00000509769 H3BUT2 72 aa3.14□□□□□ -1.91
USP53-205ENST00000509769 GFRA2O00451 464 aa3.14□□□□□ -1.91
USP53-205ENST00000509769 NKX2-8O15522 239 aa3.14□□□□□ -1.91
USP53-205ENST00000509769 CRXO43186 299 aaPredicted RBP3.14□□□□□ -1.91
USP53-205ENST00000509769 DHHO43323 396 aa3.14□□□□□ -1.91
USP53-205ENST00000509769 IGHG4P01861 327 aa3.14□□□□□ -1.91
USP53-205ENST00000509769 CXCL5P42830 114 aa3.14□□□□□ -1.91
USP53-205ENST00000509769 IRF3Q14653 427 aa3.14□□□□□ -1.91
USP53-205ENST00000509769 C2orf27AQ580R0 203 aa3.14□□□□□ -1.91
USP53-205ENST00000509769 C10orf128Q5T292 105 aa3.14□□□□□ -1.91
USP53-205ENST00000509769 NEGR1Q7Z3B1 354 aa3.14□□□□□ -1.91
USP53-205ENST00000509769 OR52E1Q8NGJ3 308 aa3.14□□□□□ -1.91
USP53-205ENST00000509769 OR10X1Q8NGY0 326 aa3.14□□□□□ -1.91
USP53-205ENST00000509769 OR10AC1Q8NH08 325 aa3.14□□□□□ -1.91
USP53-205ENST00000509769 ST8SIA1Q92185 356 aa3.14□□□□□ -1.91
USP53-205ENST00000509769 HSD17B8Q92506 261 aa3.14□□□□□ -1.91
USP53-205ENST00000509769 ZBTB45Q96K62 511 aaPredicted RBP3.14□□□□□ -1.91
USP53-205ENST00000509769 SMIM8Q96KF7 97 aa3.14□□□□□ -1.91
USP53-205ENST00000509769 HDHD3Q9BSH5 251 aaPredicted RBP3.14□□□□□ -1.91
USP53-205ENST00000509769 EGLN1Q9GZT9 426 aa3.14□□□□□ -1.91
USP53-205ENST00000509769 C12orf49Q9H741 205 aa3.14□□□□□ -1.91
USP53-205ENST00000509769 GPR35Q9HC97 309 aa3.14□□□□□ -1.91
USP53-205ENST00000509769 EMCNQ9ULC0 261 aa3.14□□□□□ -1.91
USP53-205ENST00000509769 A0A087WV62 115 aa3.14□□□□□ -1.91
USP53-205ENST00000509769 A0A0G2JLM5 398 aa3.14□□□□□ -1.91
USP53-205ENST00000509769 GAGE12BA1L429 117 aa3.14□□□□□ -1.91
USP53-205ENST00000509769 H3BMM0 161 aa3.14□□□□□ -1.91
USP53-205ENST00000509769 ZNHIT1O43257 154 aa3.14□□□□□ -1.91
USP53-205ENST00000509769 FOXH1O75593 365 aa3.14□□□□□ -1.91
USP53-205ENST00000509769 ASAH2BP0C7U1 165 aa3.14□□□□□ -1.91
USP53-205ENST00000509769 VSIG10L2P0DP72 767 aa3.14□□□□□ -1.91
USP53-205ENST00000509769 PSG2P11465 335 aa3.14□□□□□ -1.91
USP53-205ENST00000509769 CEACAM3P40198 252 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms