RNA–Protein interactions for RNA: ENST00000509601.1

TPM3-220, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 543 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-220ENST00000509601 CD37P11049 281 aa14.23□□□□□ -0.13
TPM3-220ENST00000509601 ZNF134P52741 427 aa14.23□□□□□ -0.13
TPM3-220ENST00000509601 IRF3Q14653 427 aa14.23□□□□□ -0.13
TPM3-220ENST00000509601 C9orf152Q5JTZ5 239 aa14.23□□□□□ -0.13
TPM3-220ENST00000509601 FAM27D1Q5T7N8 215 aa14.23□□□□□ -0.13
TPM3-220ENST00000509601 LRRTM1Q86UE6 522 aa14.23□□□□□ -0.13
TPM3-220ENST00000509601 MS4A15Q8N5U1 240 aa14.23□□□□□ -0.13
TPM3-220ENST00000509601 WFDC9Q8NEX5 89 aa14.23□□□□□ -0.13
TPM3-220ENST00000509601 OR4K15Q8NH41 348 aa14.23□□□□□ -0.13
TPM3-220ENST00000509601 ST6GALNAC6Q969X2 333 aa14.23□□□□□ -0.13
TPM3-220ENST00000509601 VCXQ9H320 206 aa14.23□□□□□ -0.13
TPM3-220ENST00000509601 ETAA1Q9NY74 926 aa14.23□□□□□ -0.13
TPM3-220ENST00000509601 MOB4Q9Y3A3 225 aa14.23□□□□□ -0.13
TPM3-220ENST00000509601 IGHV1-3A0A0C4DH29 117 aa14.22□□□□□ -0.13
TPM3-220ENST00000509601 TCRBV4S1A1TA0A5B7 111 aa14.22□□□□□ -0.13
TPM3-220ENST00000509601 H0YHG0 523 aa14.22□□□□□ -0.13
TPM3-220ENST00000509601 SLC31A2O15432 143 aa14.22□□□□□ -0.13
TPM3-220ENST00000509601 CRTAPO75718 401 aaPredicted RBP14.22□□□□□ -0.13
TPM3-220ENST00000509601 IGKV1D-33P01593 117 aa14.22□□□□□ -0.13
TPM3-220ENST00000509601 IGKV1-33P01594 117 aa14.22□□□□□ -0.13
TPM3-220ENST00000509601 GAPDHP04406 335 aaKnown RBP14.22□□□□□ -0.13
TPM3-220ENST00000509601 GLAP06280 429 aa14.22□□□□□ -0.13
TPM3-220ENST00000509601 TMEM11P17152 192 aa14.22□□□□□ -0.13
TPM3-220ENST00000509601 RCC1P18754 421 aaPredicted RBP14.22□□□□□ -0.13
TPM3-220ENST00000509601 FUT3P21217 361 aa14.22□□□□□ -0.13
TPM3-220ENST00000509601 MAPK3P27361 379 aaPredicted RBP14.22□□□□□ -0.13
TPM3-220ENST00000509601 AQP4P55087 323 aa14.22□□□□□ -0.13
TPM3-220ENST00000509601 SPHARQ15513 63 aa14.22□□□□□ -0.13
TPM3-220ENST00000509601 OXLD1Q5BKU9 147 aa14.22□□□□□ -0.13
TPM3-220ENST00000509601 C5orf24Q7Z6I8 188 aa14.22□□□□□ -0.13
TPM3-220ENST00000509601 NKAIN3Q8N8D7 197 aa14.22□□□□□ -0.13
TPM3-220ENST00000509601 C5orf56Q8N8D9 126 aa14.22□□□□□ -0.13
TPM3-220ENST00000509601 ZNF439Q8NDP4 499 aa14.22□□□□□ -0.13
TPM3-220ENST00000509601 MYDGFQ969H8 173 aa14.22□□□□□ -0.13
TPM3-220ENST00000509601 MND1Q9BWT6 205 aa14.22□□□□□ -0.13
TPM3-220ENST00000509601 TRAPPC2LQ9UL33 140 aa14.22□□□□□ -0.13
TPM3-220ENST00000509601 A0A1W2PRX2 142 aa14.21□□□□□ -0.13
TPM3-220ENST00000509601 UBE2QL1A1L167 161 aa14.21□□□□□ -0.13
TPM3-220ENST00000509601 CCRL2O00421 344 aa14.21□□□□□ -0.13
TPM3-220ENST00000509601 HSD17B6O14756 317 aa14.21□□□□□ -0.13
TPM3-220ENST00000509601 REG1BP48304 166 aa14.21□□□□□ -0.13
TPM3-220ENST00000509601 SLC35A2P78381 396 aa14.21□□□□□ -0.13
TPM3-220ENST00000509601 GABPB1Q06547 395 aaPredicted RBP14.21□□□□□ -0.13
TPM3-220ENST00000509601 HES1Q14469 280 aa14.21□□□□□ -0.13
TPM3-220ENST00000509601 Q3ZCU0 254 aa14.21□□□□□ -0.13
TPM3-220ENST00000509601 CT45A1Q5HYN5 189 aa14.21□□□□□ -0.13
TPM3-220ENST00000509601 C1orf100Q5SVJ3 147 aa14.21□□□□□ -0.13
TPM3-220ENST00000509601 MOB3BQ86TA1 216 aa14.21□□□□□ -0.13
TPM3-220ENST00000509601 OR1L1Q8NH94 360 aa14.21□□□□□ -0.13
TPM3-220ENST00000509601 CT45A3Q8NHU0 189 aa14.21□□□□□ -0.13
TPM3-220ENST00000509601 THRSPQ92748 146 aa14.21□□□□□ -0.13
TPM3-220ENST00000509601 EAF1Q96JC9 268 aaPredicted RBP14.21□□□□□ -0.13
TPM3-220ENST00000509601 DUSP21Q9H596 190 aa14.21□□□□□ -0.13
TPM3-220ENST00000509601 GHRLQ9UBU3 117 aa14.21□□□□□ -0.13
TPM3-220ENST00000509601 IGHV3-72A0A0B4J1Y9 119 aa14.2□□□□□ -0.14
TPM3-220ENST00000509601 FGF16O43320 207 aa14.2□□□□□ -0.14
TPM3-220ENST00000509601 CA11O75493 328 aa14.2□□□□□ -0.14
TPM3-220ENST00000509601 HBZP02008 142 aa14.2□□□□□ -0.14
TPM3-220ENST00000509601 SRMP19623 302 aa14.2□□□□□ -0.14
TPM3-220ENST00000509601 GPR50Q13585 617 aa14.2□□□□□ -0.14
TPM3-220ENST00000509601 OR10K2Q6IF99 312 aa14.2□□□□□ -0.14
TPM3-220ENST00000509601 SLC25A48Q6ZT89 311 aaKnown RBP14.2□□□□□ -0.14
TPM3-220ENST00000509601 Q8N6K4 173 aa14.2□□□□□ -0.14
TPM3-220ENST00000509601 FAM46BQ96A09 425 aa14.2□□□□□ -0.14
TPM3-220ENST00000509601 TMED9Q9BVK6 235 aa14.2□□□□□ -0.14
TPM3-220ENST00000509601 MBNL3Q9NUK0 354 aaKnown RBP14.2□□□□□ -0.14
TPM3-220ENST00000509601 SCN3BQ9NY72 215 aa14.2□□□□□ -0.14
TPM3-220ENST00000509601 TSSC4Q9Y5U2 329 aaPredicted RBP14.2□□□□□ -0.14
TPM3-220ENST00000509601 LINC01548A6NM66 108 aa14.19□□□□□ -0.14
TPM3-220ENST00000509601 ZNF736B4DX44 427 aaPredicted RBP14.19□□□□□ -0.14
TPM3-220ENST00000509601 PRB2P02812 416 aaPredicted RBP14.19□□□□□ -0.14
TPM3-220ENST00000509601 VSIG8P0DPA2 414 aa14.19□□□□□ -0.14
TPM3-220ENST00000509601 C6orf183Q5T699 404 aa14.19□□□□□ -0.14
TPM3-220ENST00000509601 CEACAM19Q7Z692 300 aa14.19□□□□□ -0.14
TPM3-220ENST00000509601 MRPL30Q8TCC3 161 aaKnown RBP14.19□□□□□ -0.14
TPM3-220ENST00000509601 RTN4IP1Q8WWV3 396 aaPredicted RBP14.19□□□□□ -0.14
TPM3-220ENST00000509601 PHYHIPQ92561 330 aa14.19□□□□□ -0.14
TPM3-220ENST00000509601 RBMXL1Q96E39 390 aaKnown RBP14.19□□□□□ -0.14
TPM3-220ENST00000509601 TAF9BQ9HBM6 251 aa14.19□□□□□ -0.14
TPM3-220ENST00000509601 PLSCR3Q9NRY6 295 aa14.19□□□□□ -0.14
TPM3-220ENST00000509601 SPINT2O43291 252 aa14.18□□□□□ -0.14
TPM3-220ENST00000509601 PDCD6O75340 191 aa14.18□□□□□ -0.14
TPM3-220ENST00000509601 MPIG6BO95866 241 aa14.18□□□□□ -0.14
TPM3-220ENST00000509601 IGHG2P01859 326 aa14.18□□□□□ -0.14
TPM3-220ENST00000509601 UCHL1P09936 223 aa14.18□□□□□ -0.14
TPM3-220ENST00000509601 MYF6P23409 242 aa14.18□□□□□ -0.14
TPM3-220ENST00000509601 ZNF137PP52743 207 aa14.18□□□□□ -0.14
TPM3-220ENST00000509601 TPBGQ13641 420 aa14.18□□□□□ -0.14
TPM3-220ENST00000509601 MED22Q15528 200 aa14.18□□□□□ -0.14
TPM3-220ENST00000509601 GLT8D1Q68CQ7 371 aa14.18□□□□□ -0.14
TPM3-220ENST00000509601 ZNF329Q86UD4 541 aa14.18□□□□□ -0.14
TPM3-220ENST00000509601 IZUMO1Q8IYV9 350 aa14.18□□□□□ -0.14
TPM3-220ENST00000509601 OR4X2Q8NGF9 303 aa14.18□□□□□ -0.14
TPM3-220ENST00000509601 OR10V1Q8NGI7 309 aa14.18□□□□□ -0.14
TPM3-220ENST00000509601 NOL4LQ96MY1 436 aaPredicted RBP14.18□□□□□ -0.14
TPM3-220ENST00000509601 PSMB11A5LHX3 300 aa14.17□□□□□ -0.14
TPM3-220ENST00000509601 UBBP0CG47 229 aa14.17□□□□□ -0.14
TPM3-220ENST00000509601 CHATP28329 748 aa14.17□□□□□ -0.14
TPM3-220ENST00000509601 CD1BP29016 333 aa14.17□□□□□ -0.14
TPM3-220ENST00000509601 RPS27AP62979 156 aaKnown RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms