RNA–Protein interactions for RNA: ENST00000509268.1

XRCC4-204, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 2

Gene XRCC4, Length 1,567 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-204ENST00000509268 JOSD1Q15040 202 aaPredicted RBP1.32□□□□□ -2.2
XRCC4-204ENST00000509268 PAFAH1B3Q15102 231 aaKnown RBP1.32□□□□□ -2.2
XRCC4-204ENST00000509268 IL17AQ16552 155 aa1.32□□□□□ -2.2
XRCC4-204ENST00000509268 ACOT6Q3I5F7 207 aaPredicted RBP1.32□□□□□ -2.2
XRCC4-204ENST00000509268 TRMT12Q53H54 448 aaKnown RBP1.32□□□□□ -2.2
XRCC4-204ENST00000509268 MPV17L2Q567V2 206 aa1.32□□□□□ -2.2
XRCC4-204ENST00000509268 TMEM97Q5BJF2 176 aa1.32□□□□□ -2.2
XRCC4-204ENST00000509268 ACSBG2Q5FVE4 666 aa1.32□□□□□ -2.2
XRCC4-204ENST00000509268 UBE2NLQ5JXB2 153 aa1.32□□□□□ -2.2
XRCC4-204ENST00000509268 NXNL2Q5VZ03 156 aa1.32□□□□□ -2.2
XRCC4-204ENST00000509268 ELP2Q6IA86 826 aa1.32□□□□□ -2.2
XRCC4-204ENST00000509268 LCN8Q6JVE9 175 aa1.32□□□□□ -2.2
XRCC4-204ENST00000509268 OLIG3Q7RTU3 272 aa1.32□□□□□ -2.2
XRCC4-204ENST00000509268 CALHM3Q86XJ0 350 aa1.32□□□□□ -2.2
XRCC4-204ENST00000509268 DOLPP1Q86YN1 238 aa1.32□□□□□ -2.2
XRCC4-204ENST00000509268 C1orf158Q8N1D5 194 aa1.32□□□□□ -2.2
XRCC4-204ENST00000509268 SLC35G3Q8N808 338 aa1.32□□□□□ -2.2
XRCC4-204ENST00000509268 DCAF4L2Q8NA75 395 aa1.32□□□□□ -2.2
XRCC4-204ENST00000509268 LINC01555Q8NAE3 123 aa1.32□□□□□ -2.2
XRCC4-204ENST00000509268 ZNF555Q8NEP9 628 aa1.32□□□□□ -2.2
XRCC4-204ENST00000509268 OR2Z1Q8NG97 314 aa1.32□□□□□ -2.2
XRCC4-204ENST00000509268 OR2T4Q8NH00 348 aa1.32□□□□□ -2.2
XRCC4-204ENST00000509268 OR4X1Q8NH49 305 aa1.32□□□□□ -2.2
XRCC4-204ENST00000509268 FAM57AQ8TBR7 257 aa1.32□□□□□ -2.2
XRCC4-204ENST00000509268 ZNF721Q8TF20 911 aa1.32□□□□□ -2.2
XRCC4-204ENST00000509268 ORAOV1Q8WV07 137 aa1.32□□□□□ -2.2
XRCC4-204ENST00000509268 SLC35B4Q969S0 331 aa1.32□□□□□ -2.2
XRCC4-204ENST00000509268 RPP21Q9H633 154 aaKnown RBP1.32□□□□□ -2.2
XRCC4-204ENST00000509268 NOX3Q9HBY0 568 aa1.32□□□□□ -2.2
XRCC4-204ENST00000509268 C8orf4Q9NR00 106 aa1.32□□□□□ -2.2
XRCC4-204ENST00000509268 C8orf17Q9NRJ1 99 aa1.32□□□□□ -2.2
XRCC4-204ENST00000509268 PLSCR3Q9NRY6 295 aa1.32□□□□□ -2.2
XRCC4-204ENST00000509268 GLS2Q9UI32 602 aa1.32□□□□□ -2.2
XRCC4-204ENST00000509268 C14orf166Q9Y224 244 aaKnown RBP1.32□□□□□ -2.2
XRCC4-204ENST00000509268 HDGFL3Q9Y3E1 203 aa1.32□□□□□ -2.2
XRCC4-204ENST00000509268 LSM5Q9Y4Y9 91 aaKnown RBP1.32□□□□□ -2.2
XRCC4-204ENST00000509268 ADAMTS13Q76LX8 1427 aa1.32□□□□□ -2.2
XRCC4-204ENST00000509268 DNMT1P26358 1616 aaKnown RBP1.31□□□□□ -2.2
XRCC4-204ENST00000509268 ROCK1Q13464 1354 aa1.31□□□□□ -2.2
XRCC4-204ENST00000509268 IGLV11-55A0A075B6I3 123 aa1.31□□□□□ -2.2
XRCC4-204ENST00000509268 IGLV1-50A0A075B6I6 118 aa1.31□□□□□ -2.2
XRCC4-204ENST00000509268 A0A0G2JMP0 313 aa1.31□□□□□ -2.2
XRCC4-204ENST00000509268 IGHV3-64DA0A0J9YX35 117 aa1.31□□□□□ -2.2
XRCC4-204ENST00000509268 IGHV5-10-1A0A0J9YXX1 117 aa1.31□□□□□ -2.2
XRCC4-204ENST00000509268 A0A0X1KG70 313 aa1.31□□□□□ -2.2
XRCC4-204ENST00000509268 GNG14A0A1W2PPG7 69 aa1.31□□□□□ -2.2
XRCC4-204ENST00000509268 SLC37A4O43826 429 aa1.31□□□□□ -2.2
XRCC4-204ENST00000509268 COX7A2P2O60397 106 aa1.31□□□□□ -2.2
XRCC4-204ENST00000509268 PLIN3O60664 434 aa1.31□□□□□ -2.2
XRCC4-204ENST00000509268 SOD3P08294 240 aa1.31□□□□□ -2.2
XRCC4-204ENST00000509268 OR4A8P0C604 315 aa1.31□□□□□ -2.2
XRCC4-204ENST00000509268 SEC11BP0C7V7 166 aa1.31□□□□□ -2.2
XRCC4-204ENST00000509268 CYBAP13498 195 aa1.31□□□□□ -2.2
XRCC4-204ENST00000509268 IMPA1P29218 277 aa1.31□□□□□ -2.2
XRCC4-204ENST00000509268 MAP2K4P45985 399 aa1.31□□□□□ -2.2
XRCC4-204ENST00000509268 UBE2AP49459 152 aa1.31□□□□□ -2.2
XRCC4-204ENST00000509268 CMC4P56277 68 aaPredicted RBP1.31□□□□□ -2.2
XRCC4-204ENST00000509268 CTBP2P56545 445 aa1.31□□□□□ -2.2
XRCC4-204ENST00000509268 RAB2AP61019 212 aa1.31□□□□□ -2.2
XRCC4-204ENST00000509268 PSME3P61289 254 aa1.31□□□□□ -2.2
XRCC4-204ENST00000509268 DAD1P61803 113 aa1.31□□□□□ -2.2
XRCC4-204ENST00000509268 RPS24P62847 133 aaKnown RBP1.31□□□□□ -2.2
XRCC4-204ENST00000509268 GNB2P62879 340 aa1.31□□□□□ -2.2
XRCC4-204ENST00000509268 PSG4Q00888 419 aa1.31□□□□□ -2.2
XRCC4-204ENST00000509268 RUNX1Q01196 453 aa1.31□□□□□ -2.2
XRCC4-204ENST00000509268 TMEM267Q0VDI3 215 aaPredicted RBP1.31□□□□□ -2.2
XRCC4-204ENST00000509268 TMEM241Q24JQ0 296 aa1.31□□□□□ -2.2
XRCC4-204ENST00000509268 RNASE13Q5GAN3 156 aaKnown RBP1.31□□□□□ -2.2
XRCC4-204ENST00000509268 C1orf194Q5T5A4 169 aa1.31□□□□□ -2.2
XRCC4-204ENST00000509268 HENMT1Q5T8I9 393 aaKnown RBP1.31□□□□□ -2.2
XRCC4-204ENST00000509268 HES3Q5TGS1 186 aa1.31□□□□□ -2.2
XRCC4-204ENST00000509268 SCGB1D4Q6XE38 83 aa1.31□□□□□ -2.2
XRCC4-204ENST00000509268 SLC36A1Q7Z2H8 476 aa1.31□□□□□ -2.2
XRCC4-204ENST00000509268 ZNF550Q7Z398 422 aa1.31□□□□□ -2.2
XRCC4-204ENST00000509268 C6orf120Q7Z4R8 191 aa1.31□□□□□ -2.2
XRCC4-204ENST00000509268 TMED4Q7Z7H5 227 aa1.31□□□□□ -2.2
XRCC4-204ENST00000509268 SLC51BQ86UW2 128 aa1.31□□□□□ -2.2
XRCC4-204ENST00000509268 YIPF7Q8N8F6 280 aa1.31□□□□□ -2.2
XRCC4-204ENST00000509268 SLC25A29Q8N8R3 303 aa1.31□□□□□ -2.2
XRCC4-204ENST00000509268 TMEM75Q8N9X5 138 aa1.31□□□□□ -2.2
XRCC4-204ENST00000509268 OR2M3Q8NG83 312 aa1.31□□□□□ -2.2
XRCC4-204ENST00000509268 OR2D3Q8NGH3 330 aa1.31□□□□□ -2.2
XRCC4-204ENST00000509268 MFSD8Q8NHS3 518 aa1.31□□□□□ -2.2
XRCC4-204ENST00000509268 TWIST2Q8WVJ9 160 aa1.31□□□□□ -2.2
XRCC4-204ENST00000509268 LINC00477Q96M19 166 aa1.31□□□□□ -2.2
XRCC4-204ENST00000509268 YPEL4Q96NS1 127 aa1.31□□□□□ -2.2
XRCC4-204ENST00000509268 OLFM3Q96PB7 478 aa1.31□□□□□ -2.2
XRCC4-204ENST00000509268 PPP1R2P1Q96PQ5 205 aa1.31□□□□□ -2.2
XRCC4-204ENST00000509268 OR2A5Q96R48 311 aa1.31□□□□□ -2.2
XRCC4-204ENST00000509268 PHB2Q99623 299 aa1.31□□□□□ -2.2
XRCC4-204ENST00000509268 CDX2Q99626 313 aaPredicted RBP1.31□□□□□ -2.2
XRCC4-204ENST00000509268 SIGMAR1Q99720 223 aa1.31□□□□□ -2.2
XRCC4-204ENST00000509268 ANAPC13Q9BS18 74 aa1.31□□□□□ -2.2
XRCC4-204ENST00000509268 DCSTAMPQ9H295 470 aa1.31□□□□□ -2.2
XRCC4-204ENST00000509268 TRABDQ9H4I3 376 aa1.31□□□□□ -2.2
XRCC4-204ENST00000509268 UBQLN4Q9NRR5 601 aa1.31□□□□□ -2.2
XRCC4-204ENST00000509268 IDI2-AS1Q9NZ38 188 aa1.31□□□□□ -2.2
XRCC4-204ENST00000509268 NUFIP1Q9UHK0 495 aaKnown RBP1.31□□□□□ -2.2
XRCC4-204ENST00000509268 SMPXQ9UHP9 88 aa1.31□□□□□ -2.2
XRCC4-204ENST00000509268 HHLA2Q9UM44 414 aa1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms