RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 OR2L13Q8N349 312 aa9.29□□□□□ -0.92
PDLIM5-210ENST00000508216 TMEM251Q8N6I4 163 aa9.29□□□□□ -0.92
PDLIM5-210ENST00000508216 VSTM2AQ8TAG5 236 aa9.29□□□□□ -0.92
PDLIM5-210ENST00000508216 NEU4Q8WWR8 484 aaPredicted RBP9.29□□□□□ -0.92
PDLIM5-210ENST00000508216 DAZLQ92904 295 aaKnown RBP9.29□□□□□ -0.92
PDLIM5-210ENST00000508216 DUX5Q96PT3 197 aa9.29□□□□□ -0.92
PDLIM5-210ENST00000508216 FRG2BQ96QU4 278 aa9.29□□□□□ -0.92
PDLIM5-210ENST00000508216 ANAPC13Q9BS18 74 aa9.29□□□□□ -0.92
PDLIM5-210ENST00000508216 KIF26AQ9ULI4 1882 aaPredicted RBP9.29□□□□□ -0.92
PDLIM5-210ENST00000508216 WIPF3A6NGB9 483 aa9.29□□□□□ -0.92
PDLIM5-210ENST00000508216 SMIM9A6NGZ8 99 aa9.29□□□□□ -0.92
PDLIM5-210ENST00000508216 H3BMH7 237 aa9.29□□□□□ -0.92
PDLIM5-210ENST00000508216 FGF10O15520 208 aaPredicted RBP9.29□□□□□ -0.92
PDLIM5-210ENST00000508216 DHHO43323 396 aa9.29□□□□□ -0.92
PDLIM5-210ENST00000508216 CEACAM4O75871 244 aa9.29□□□□□ -0.92
PDLIM5-210ENST00000508216 APBA3O96018 575 aa9.29□□□□□ -0.92
PDLIM5-210ENST00000508216 KRASP01116 189 aa9.29□□□□□ -0.92
PDLIM5-210ENST00000508216 ZNF93P35789 620 aaPredicted RBP9.29□□□□□ -0.92
PDLIM5-210ENST00000508216 OR3A4PP47883 348 aa9.29□□□□□ -0.92
PDLIM5-210ENST00000508216 EFNA5P52803 228 aa9.29□□□□□ -0.92
PDLIM5-210ENST00000508216 SMAD3P84022 425 aaKnown RBP9.29□□□□□ -0.92
PDLIM5-210ENST00000508216 POU3F1Q03052 451 aaPredicted RBP9.29□□□□□ -0.92
PDLIM5-210ENST00000508216 FMODQ06828 376 aa9.29□□□□□ -0.92
PDLIM5-210ENST00000508216 CD226Q15762 336 aa9.29□□□□□ -0.92
PDLIM5-210ENST00000508216 LCN15Q6UWW0 184 aa9.29□□□□□ -0.92
PDLIM5-210ENST00000508216 B3GALNT2Q8NCR0 500 aa9.29□□□□□ -0.92
PDLIM5-210ENST00000508216 OR4C3Q8NH37 302 aa9.29□□□□□ -0.92
PDLIM5-210ENST00000508216 MBD3L1Q8WWY6 194 aa9.29□□□□□ -0.92
PDLIM5-210ENST00000508216 AP1S3Q96PC3 154 aa9.29□□□□□ -0.92
PDLIM5-210ENST00000508216 SH3BGRL3Q9H299 93 aa9.29□□□□□ -0.92
PDLIM5-210ENST00000508216 RAB9BQ9NP90 201 aa9.29□□□□□ -0.92
PDLIM5-210ENST00000508216 PNRC2Q9NPJ4 139 aaKnown RBP9.29□□□□□ -0.92
PDLIM5-210ENST00000508216 FBLN5Q9UBX5 448 aa9.29□□□□□ -0.92
PDLIM5-210ENST00000508216 KLK13Q9UKR3 277 aa9.29□□□□□ -0.92
PDLIM5-210ENST00000508216 LIPT2A6NK58 231 aa9.28□□□□□ -0.92
PDLIM5-210ENST00000508216 VWC2LB2RUY7 222 aa9.28□□□□□ -0.92
PDLIM5-210ENST00000508216 PITX3O75364 302 aa9.28□□□□□ -0.92
PDLIM5-210ENST00000508216 UTS2O95399 124 aa9.28□□□□□ -0.92
PDLIM5-210ENST00000508216 CRYGBP07316 175 aa9.28□□□□□ -0.92
PDLIM5-210ENST00000508216 C3orf79P0CE67 100 aa9.28□□□□□ -0.92
PDLIM5-210ENST00000508216 EPORP19235 508 aa9.28□□□□□ -0.92
PDLIM5-210ENST00000508216 ADMP35318 185 aa9.28□□□□□ -0.92
PDLIM5-210ENST00000508216 DRD3P35462 400 aa9.28□□□□□ -0.92
PDLIM5-210ENST00000508216 MFAP4P55083 255 aa9.28□□□□□ -0.92
PDLIM5-210ENST00000508216 PPP1CBP62140 327 aa9.28□□□□□ -0.92
PDLIM5-210ENST00000508216 SUPT4H1P63272 117 aaKnown RBP9.28□□□□□ -0.92
PDLIM5-210ENST00000508216 ACSM2AQ08AH3 577 aa9.28□□□□□ -0.92
PDLIM5-210ENST00000508216 KLRD1Q13241 179 aa9.28□□□□□ -0.92
PDLIM5-210ENST00000508216 ZNF676Q8N7Q3 588 aa9.28□□□□□ -0.92
PDLIM5-210ENST00000508216 C1orf162Q8NEQ5 155 aaPredicted RBP9.28□□□□□ -0.92
PDLIM5-210ENST00000508216 SGMS2Q8NHU3 365 aa9.28□□□□□ -0.92
PDLIM5-210ENST00000508216 C18orf32Q8TCD1 76 aa9.28□□□□□ -0.92
PDLIM5-210ENST00000508216 FGF13Q92913 245 aa9.28□□□□□ -0.92
PDLIM5-210ENST00000508216 NEURL3Q96EH8 262 aa9.28□□□□□ -0.92
PDLIM5-210ENST00000508216 LIN37Q96GY3 246 aaPredicted RBP9.28□□□□□ -0.92
PDLIM5-210ENST00000508216 KCNS1Q96KK3 526 aa9.28□□□□□ -0.92
PDLIM5-210ENST00000508216 TRIB1Q96RU8 372 aa9.28□□□□□ -0.92
PDLIM5-210ENST00000508216 SLC25A33Q9BSK2 321 aa9.28□□□□□ -0.92
PDLIM5-210ENST00000508216 BCL2L10Q9HD36 194 aa9.28□□□□□ -0.92
PDLIM5-210ENST00000508216 PIGVQ9NUD9 493 aa9.28□□□□□ -0.92
PDLIM5-210ENST00000508216 NECAP2Q9NVZ3 263 aa9.28□□□□□ -0.92
PDLIM5-210ENST00000508216 CRIM1Q9NZV1 1036 aa9.28□□□□□ -0.92
PDLIM5-210ENST00000508216 SIGLEC9Q9Y336 463 aa9.28□□□□□ -0.92
PDLIM5-210ENST00000508216 RNF114Q9Y508 228 aa9.28□□□□□ -0.92
PDLIM5-210ENST00000508216 GAGE12JA6NER3 117 aa9.27□□□□□ -0.92
PDLIM5-210ENST00000508216 GAGE7O76087 117 aa9.27□□□□□ -0.92
PDLIM5-210ENST00000508216 WNT2P09544 360 aa9.27□□□□□ -0.92
PDLIM5-210ENST00000508216 GAGE12FP0CL80 117 aa9.27□□□□□ -0.92
PDLIM5-210ENST00000508216 GAGE12GP0CL81 117 aa9.27□□□□□ -0.92
PDLIM5-210ENST00000508216 GAGE12IP0CL82 117 aa9.27□□□□□ -0.92
PDLIM5-210ENST00000508216 IGLL1P15814 213 aa9.27□□□□□ -0.92
PDLIM5-210ENST00000508216 ZNF28P17035 718 aa9.27□□□□□ -0.92
PDLIM5-210ENST00000508216 GATA4P43694 442 aa9.27□□□□□ -0.92
PDLIM5-210ENST00000508216 GAGE4Q13068 117 aa9.27□□□□□ -0.92
PDLIM5-210ENST00000508216 TBR1Q16650 682 aa9.27□□□□□ -0.92
PDLIM5-210ENST00000508216 LRRC75BQ2VPJ9 315 aa9.27□□□□□ -0.92
PDLIM5-210ENST00000508216 SLC25A53Q5H9E4 307 aa9.27□□□□□ -0.92
PDLIM5-210ENST00000508216 GLYATL3Q5SZD4 288 aa9.27□□□□□ -0.92
PDLIM5-210ENST00000508216 C1orf53Q5VUE5 145 aa9.27□□□□□ -0.92
PDLIM5-210ENST00000508216 FBXL22Q6P050 247 aa9.27□□□□□ -0.92
PDLIM5-210ENST00000508216 AGTRAPQ6RW13 159 aa9.27□□□□□ -0.92
PDLIM5-210ENST00000508216 H2BFWTQ7Z2G1 175 aa9.27□□□□□ -0.92
PDLIM5-210ENST00000508216 ZNF611Q8N823 705 aa9.27□□□□□ -0.92
PDLIM5-210ENST00000508216 CLEC4CQ8WTT0 213 aa9.27□□□□□ -0.92
PDLIM5-210ENST00000508216 NEUROG1Q92886 237 aa9.27□□□□□ -0.92
PDLIM5-210ENST00000508216 SCARF2Q96GP6 870 aaPredicted RBP9.27□□□□□ -0.92
PDLIM5-210ENST00000508216 DNAJC30Q96LL9 226 aa9.27□□□□□ -0.92
PDLIM5-210ENST00000508216 ADOQ96SZ5 270 aa9.27□□□□□ -0.92
PDLIM5-210ENST00000508216 SPANXB1Q9NS25 103 aaPredicted RBP9.27□□□□□ -0.92
PDLIM5-210ENST00000508216 SERTAD4Q9NUC0 356 aa9.27□□□□□ -0.92
PDLIM5-210ENST00000508216 C1orf123Q9NWV4 160 aa9.27□□□□□ -0.92
PDLIM5-210ENST00000508216 PLA2G3Q9NZ20 509 aa9.27□□□□□ -0.92
PDLIM5-210ENST00000508216 LHX3Q9UBR4 397 aa9.27□□□□□ -0.92
PDLIM5-210ENST00000508216 COL4A1P02462 1669 aa9.27□□□□□ -0.92
PDLIM5-210ENST00000508216 DENND4CQ5VZ89 1909 aa9.27□□□□□ -0.93
PDLIM5-210ENST00000508216 FABP5P3A8MUU1 101 aa9.27□□□□□ -0.93
PDLIM5-210ENST00000508216 ZNF878C9JN71 531 aa9.27□□□□□ -0.93
PDLIM5-210ENST00000508216 F8W1H4 67 aa9.27□□□□□ -0.93
PDLIM5-210ENST00000508216 SH2D1BO14796 132 aa9.27□□□□□ -0.93
PDLIM5-210ENST00000508216 CEBPBP17676 345 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms