RNA–Protein interactions for RNA: ENST00000508017.5

SNCAIP-209, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,410 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-209ENST00000508017 TECTBQ96PL2 329 aa11.46□□□□□ -0.58
SNCAIP-209ENST00000508017 CABLES2Q9BTV7 478 aa11.46□□□□□ -0.58
SNCAIP-209ENST00000508017 OR14J1Q9UGF5 321 aa11.46□□□□□ -0.58
SNCAIP-209ENST00000508017 ATP23Q9Y6H3 246 aa11.46□□□□□ -0.58
SNCAIP-209ENST00000508017 GJE1A6NN92 205 aa11.45□□□□□ -0.58
SNCAIP-209ENST00000508017 CEBPZOSA8MTT3 80 aa11.45□□□□□ -0.58
SNCAIP-209ENST00000508017 IL2RGP31785 369 aa11.45□□□□□ -0.58
SNCAIP-209ENST00000508017 RNPS1Q15287 305 aaKnown RBP11.45□□□□□ -0.58
SNCAIP-209ENST00000508017 BEND4Q6ZU67 534 aa11.45□□□□□ -0.58
SNCAIP-209ENST00000508017 RPS19BP1Q86WX3 136 aaKnown RBP11.45□□□□□ -0.58
SNCAIP-209ENST00000508017 OR10D3Q8NH80 312 aa11.45□□□□□ -0.58
SNCAIP-209ENST00000508017 GTF3AQ92664 365 aaKnown RBP11.45□□□□□ -0.58
SNCAIP-209ENST00000508017 IL22RA2Q969J5 263 aa11.45□□□□□ -0.58
SNCAIP-209ENST00000508017 UFSP2Q9NUQ7 469 aa11.45□□□□□ -0.58
SNCAIP-209ENST00000508017 A0A087X0M5 115 aa11.45□□□□□ -0.58
SNCAIP-209ENST00000508017 A0A1B0GX30 115 aa11.45□□□□□ -0.58
SNCAIP-209ENST00000508017 FAM90A10PA6NDY2 464 aa11.45□□□□□ -0.58
SNCAIP-209ENST00000508017 FAM90A18PA6NE21 464 aa11.45□□□□□ -0.58
SNCAIP-209ENST00000508017 FAM90A16PA6NEW6 464 aa11.45□□□□□ -0.58
SNCAIP-209ENST00000508017 FAM90A20PA6NIJ5 464 aa11.45□□□□□ -0.58
SNCAIP-209ENST00000508017 FAM90A8PA6NJQ4 464 aa11.45□□□□□ -0.58
SNCAIP-209ENST00000508017 FAM90A7PA6NKC0 464 aa11.45□□□□□ -0.58
SNCAIP-209ENST00000508017 FAM90A22PA8MWA6 464 aa11.45□□□□□ -0.58
SNCAIP-209ENST00000508017 FAM90A12PA8MX19 464 aa11.45□□□□□ -0.58
SNCAIP-209ENST00000508017 FAM90A5PA8MXJ8 464 aa11.45□□□□□ -0.58
SNCAIP-209ENST00000508017 FAM90A23PA8MXZ1 464 aa11.45□□□□□ -0.58
SNCAIP-209ENST00000508017 SYNGR1O43759 233 aa11.45□□□□□ -0.58
SNCAIP-209ENST00000508017 IGKV1-39P01597 117 aa11.45□□□□□ -0.58
SNCAIP-209ENST00000508017 IGKV1D-39P04432 117 aa11.45□□□□□ -0.58
SNCAIP-209ENST00000508017 FAM90A15PP0C7V4 464 aa11.45□□□□□ -0.58
SNCAIP-209ENST00000508017 FAM90A13PP0C7W8 464 aa11.45□□□□□ -0.58
SNCAIP-209ENST00000508017 FAM90A14PP0C7W9 464 aa11.45□□□□□ -0.58
SNCAIP-209ENST00000508017 FAM90A24PP0C7X0 464 aa11.45□□□□□ -0.58
SNCAIP-209ENST00000508017 PKIAP61925 76 aa11.45□□□□□ -0.58
SNCAIP-209ENST00000508017 PNRC1Q12796 327 aaPredicted RBP11.45□□□□□ -0.58
SNCAIP-209ENST00000508017 WDR25Q64LD2 544 aaPredicted RBP11.45□□□□□ -0.58
SNCAIP-209ENST00000508017 SSX9Q7RTT3 188 aa11.45□□□□□ -0.58
SNCAIP-209ENST00000508017 REC114Q7Z4M0 266 aa11.45□□□□□ -0.58
SNCAIP-209ENST00000508017 DMRTC2Q8IXT2 367 aaPredicted RBP11.45□□□□□ -0.58
SNCAIP-209ENST00000508017 ZNF525Q8N782 197 aa11.45□□□□□ -0.58
SNCAIP-209ENST00000508017 OR4X1Q8NH49 305 aa11.45□□□□□ -0.58
SNCAIP-209ENST00000508017 RNASE11Q8TAA1 199 aaKnown RBP11.45□□□□□ -0.58
SNCAIP-209ENST00000508017 MRPL30Q8TCC3 161 aaKnown RBP11.45□□□□□ -0.58
SNCAIP-209ENST00000508017 SCGB1C1Q8TD33 95 aa11.45□□□□□ -0.58
SNCAIP-209ENST00000508017 ZNF845Q96IR2 970 aaPredicted RBP11.45□□□□□ -0.58
SNCAIP-209ENST00000508017 TMEM242Q9NWH2 141 aa11.45□□□□□ -0.58
SNCAIP-209ENST00000508017 CACNG5Q9UF02 275 aa11.45□□□□□ -0.58
SNCAIP-209ENST00000508017 TNRC6BQ9UPQ9 1833 aaKnown RBP11.45□□□□□ -0.58
SNCAIP-209ENST00000508017 ESPL1Q14674 2120 aa11.45□□□□□ -0.58
SNCAIP-209ENST00000508017 TRBV24-1A0A075B6N3 115 aa11.44□□□□□ -0.58
SNCAIP-209ENST00000508017 KIR2DS1A0A191URI9 304 aa11.44□□□□□ -0.58
SNCAIP-209ENST00000508017 HS3ST1O14792 307 aa11.44□□□□□ -0.58
SNCAIP-209ENST00000508017 CNOT4O95628 575 aaKnown RBP11.44□□□□□ -0.58
SNCAIP-209ENST00000508017 KIR2DS4P43632 304 aa11.44□□□□□ -0.58
SNCAIP-209ENST00000508017 ELLP55199 621 aaPredicted RBP11.44□□□□□ -0.58
SNCAIP-209ENST00000508017 PCBD1P61457 104 aa11.44□□□□□ -0.58
SNCAIP-209ENST00000508017 CLN3Q13286 438 aa11.44□□□□□ -0.58
SNCAIP-209ENST00000508017 HNF4GQ14541 408 aa11.44□□□□□ -0.58
SNCAIP-209ENST00000508017 KIR2DS1Q14954 304 aa11.44□□□□□ -0.58
SNCAIP-209ENST00000508017 SRSF7Q16629 238 aaKnown RBP eCLIP11.44□□□□□ -0.58
SNCAIP-209ENST00000508017 WIPI1Q5MNZ9 446 aaPredicted RBP11.44□□□□□ -0.58
SNCAIP-209ENST00000508017 ZNF324BQ6AW86 544 aaPredicted RBP11.44□□□□□ -0.58
SNCAIP-209ENST00000508017 NECAP1Q8NC96 275 aa11.44□□□□□ -0.58
SNCAIP-209ENST00000508017 OR1K1Q8NGR3 316 aa11.44□□□□□ -0.58
SNCAIP-209ENST00000508017 MBD3L1Q8WWY6 194 aa11.44□□□□□ -0.58
SNCAIP-209ENST00000508017 WDR54Q9H977 334 aa11.44□□□□□ -0.58
SNCAIP-209ENST00000508017 CDH20Q9HBT6 801 aa11.44□□□□□ -0.58
SNCAIP-209ENST00000508017 ERRFI1Q9UJM3 462 aaPredicted RBP11.44□□□□□ -0.58
SNCAIP-209ENST00000508017 A0A096LPE4 126 aa11.44□□□□□ -0.58
SNCAIP-209ENST00000508017 TRAV39A0A0B4J263 110 aa11.44□□□□□ -0.58
SNCAIP-209ENST00000508017 A0A1W2PPZ6 126 aa11.44□□□□□ -0.58
SNCAIP-209ENST00000508017 SMCO3A2RU48 225 aa11.44□□□□□ -0.58
SNCAIP-209ENST00000508017 KLF7O75840 302 aaPredicted RBP11.44□□□□□ -0.58
SNCAIP-209ENST00000508017 SERPINE2P07093 398 aa11.44□□□□□ -0.58
SNCAIP-209ENST00000508017 ABLIM2Q6H8Q1 611 aa11.44□□□□□ -0.58
SNCAIP-209ENST00000508017 RDH5Q92781 318 aa11.44□□□□□ -0.58
SNCAIP-209ENST00000508017 RAB40CQ96S21 281 aa11.44□□□□□ -0.58
SNCAIP-209ENST00000508017 PRDM14Q9GZV8 571 aa11.44□□□□□ -0.58
SNCAIP-209ENST00000508017 RBKSQ9H477 322 aa11.44□□□□□ -0.58
SNCAIP-209ENST00000508017 PLK3Q9H4B4 646 aa11.44□□□□□ -0.58
SNCAIP-209ENST00000508017 DNPH1O43598 174 aa11.43□□□□□ -0.58
SNCAIP-209ENST00000508017 EPHA8P29322 1005 aaPredicted RBP11.43□□□□□ -0.58
SNCAIP-209ENST00000508017 MLF1P58340 268 aa11.43□□□□□ -0.58
SNCAIP-209ENST00000508017 PSENENQ9NZ42 101 aa11.43□□□□□ -0.58
SNCAIP-209ENST00000508017 OR1A1Q9P1Q5 309 aa11.43□□□□□ -0.58
SNCAIP-209ENST00000508017 GAB2Q9UQC2 676 aa11.43□□□□□ -0.58
SNCAIP-209ENST00000508017 C9J4A7 227 aa11.43□□□□□ -0.58
SNCAIP-209ENST00000508017 TSTD3H0UI37 97 aa11.43□□□□□ -0.58
SNCAIP-209ENST00000508017 TRAPPC2LH3BP13 241 aa11.43□□□□□ -0.58
SNCAIP-209ENST00000508017 TRAPPC6AO75865 159 aa11.43□□□□□ -0.58
SNCAIP-209ENST00000508017 OPN1MWP04001 364 aa11.43□□□□□ -0.58
SNCAIP-209ENST00000508017 OPN1MW2P0DN77 364 aa11.43□□□□□ -0.58
SNCAIP-209ENST00000508017 OPN1MW3P0DN78 364 aa11.43□□□□□ -0.58
SNCAIP-209ENST00000508017 NDUFB7P17568 137 aa11.43□□□□□ -0.58
SNCAIP-209ENST00000508017 SRD5A2P31213 254 aa11.43□□□□□ -0.58
SNCAIP-209ENST00000508017 MDH2P40926 338 aaKnown RBP11.43□□□□□ -0.58
SNCAIP-209ENST00000508017 COL10A1Q03692 680 aa11.43□□□□□ -0.58
SNCAIP-209ENST00000508017 ADIRFQ15847 76 aa11.43□□□□□ -0.58
SNCAIP-209ENST00000508017 IGFBP7Q16270 282 aa11.43□□□□□ -0.58
SNCAIP-209ENST00000508017 COLCA1Q6ZS62 124 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms