RNA–Protein interactions for RNA: ENST00000506858.2

SCAMP1-202, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-202ENST00000506858 HSF4Q9ULV5 492 aa7.23□□□□□ -1.25
SCAMP1-202ENST00000506858 LINC00312Q9Y6C7 94 aa7.23□□□□□ -1.25
SCAMP1-202ENST00000506858 CUBNO60494 3623 aa7.22□□□□□ -1.25
SCAMP1-202ENST00000506858 TRAV40A0A0B4J280 105 aa7.22□□□□□ -1.25
SCAMP1-202ENST00000506858 KBTBD11-OT1A0A1B0GTJ5 212 aa7.22□□□□□ -1.25
SCAMP1-202ENST00000506858 C17orf98A8MV24 154 aa7.22□□□□□ -1.25
SCAMP1-202ENST00000506858 C15orf65H3BRN8 121 aa7.22□□□□□ -1.25
SCAMP1-202ENST00000506858 HBZP02008 142 aa7.22□□□□□ -1.25
SCAMP1-202ENST00000506858 GLAP06280 429 aa7.22□□□□□ -1.25
SCAMP1-202ENST00000506858 KCNJ3P48549 501 aa7.22□□□□□ -1.25
SCAMP1-202ENST00000506858 SCAND1P57086 179 aa7.22□□□□□ -1.25
SCAMP1-202ENST00000506858 GNMTQ14749 295 aa7.22□□□□□ -1.25
SCAMP1-202ENST00000506858 HACD4Q5VWC8 232 aa7.22□□□□□ -1.25
SCAMP1-202ENST00000506858 GAPTQ8N292 157 aa7.22□□□□□ -1.25
SCAMP1-202ENST00000506858 ZNF565Q8N9K5 539 aa7.22□□□□□ -1.25
SCAMP1-202ENST00000506858 OR52L2PQ8NGH6 319 aa7.22□□□□□ -1.25
SCAMP1-202ENST00000506858 C17orf50Q8WW18 174 aa7.22□□□□□ -1.25
SCAMP1-202ENST00000506858 CORO2AQ92828 525 aa7.22□□□□□ -1.25
SCAMP1-202ENST00000506858 TNFRSF14Q92956 283 aa7.22□□□□□ -1.25
SCAMP1-202ENST00000506858 DIRAS2Q96HU8 199 aa7.22□□□□□ -1.25
SCAMP1-202ENST00000506858 ABHD1Q96SE0 405 aa7.22□□□□□ -1.25
SCAMP1-202ENST00000506858 PARP12Q9H0J9 701 aaKnown RBP7.22□□□□□ -1.25
SCAMP1-202ENST00000506858 OR6C3Q9NZP0 311 aa7.22□□□□□ -1.25
SCAMP1-202ENST00000506858 IGKV1-6A0A0C4DH72 117 aa7.21□□□□□ -1.26
SCAMP1-202ENST00000506858 CENPVL3A0A0U1RRI6 287 aa7.21□□□□□ -1.26
SCAMP1-202ENST00000506858 FUOMA2VDF0 154 aa7.21□□□□□ -1.26
SCAMP1-202ENST00000506858 FCGR3AP08637 254 aa7.21□□□□□ -1.26
SCAMP1-202ENST00000506858 GSTT2P0CG29 244 aa7.21□□□□□ -1.26
SCAMP1-202ENST00000506858 GSTT2BP0CG30 244 aa7.21□□□□□ -1.26
SCAMP1-202ENST00000506858 IGHV1-8P0DP01 117 aa7.21□□□□□ -1.26
SCAMP1-202ENST00000506858 HOXB4P17483 251 aaPredicted RBP7.21□□□□□ -1.26
SCAMP1-202ENST00000506858 TALDO1P37837 337 aa7.21□□□□□ -1.26
SCAMP1-202ENST00000506858 MNDAP41218 407 aa7.21□□□□□ -1.26
SCAMP1-202ENST00000506858 GNG2P59768 71 aa7.21□□□□□ -1.26
SCAMP1-202ENST00000506858 LDLRAD2Q5SZI1 272 aa7.21□□□□□ -1.26
SCAMP1-202ENST00000506858 OR52W1Q6IF63 320 aa7.21□□□□□ -1.26
SCAMP1-202ENST00000506858 ZNF880Q6PDB4 577 aa7.21□□□□□ -1.26
SCAMP1-202ENST00000506858 IL1F10Q8WWZ1 152 aa7.21□□□□□ -1.26
SCAMP1-202ENST00000506858 POM121Q96HA1 1249 aa7.21□□□□□ -1.26
SCAMP1-202ENST00000506858 KIRREL1Q96J84 757 aa7.21□□□□□ -1.26
SCAMP1-202ENST00000506858 ZNF286AQ9HBT8 521 aa7.21□□□□□ -1.26
SCAMP1-202ENST00000506858 Q9N2K0 584 aa7.21□□□□□ -1.26
SCAMP1-202ENST00000506858 ZNF69Q9UC07 566 aa7.21□□□□□ -1.26
SCAMP1-202ENST00000506858 UBE2J1Q9Y385 318 aaPredicted RBP7.21□□□□□ -1.26
SCAMP1-202ENST00000506858 MDFIC2A0A1B0GVS7 189 aa7.2□□□□□ -1.26
SCAMP1-202ENST00000506858 ZNF729A6NN14 1252 aaPredicted RBP7.2□□□□□ -1.26
SCAMP1-202ENST00000506858 J3QRK9 145 aa7.2□□□□□ -1.26
SCAMP1-202ENST00000506858 SLC31A2O15432 143 aa7.2□□□□□ -1.26
SCAMP1-202ENST00000506858 TMEM127O75204 238 aa7.2□□□□□ -1.26
SCAMP1-202ENST00000506858 GSTP1P09211 210 aaKnown RBP7.2□□□□□ -1.26
SCAMP1-202ENST00000506858 PRTN3P24158 256 aa7.2□□□□□ -1.26
SCAMP1-202ENST00000506858 PPP1CCP36873 323 aaKnown RBP7.2□□□□□ -1.26
SCAMP1-202ENST00000506858 SRP14P37108 136 aaKnown RBP7.2□□□□□ -1.26
SCAMP1-202ENST00000506858 RANBP1P43487 201 aa7.2□□□□□ -1.26
SCAMP1-202ENST00000506858 GNG10P50151 68 aa7.2□□□□□ -1.26
SCAMP1-202ENST00000506858 DGCR2P98153 550 aa7.2□□□□□ -1.26
SCAMP1-202ENST00000506858 DYNC1I2Q13409 638 aaKnown RBP7.2□□□□□ -1.26
SCAMP1-202ENST00000506858 IGSF11Q5DX21 431 aa7.2□□□□□ -1.26
SCAMP1-202ENST00000506858 OR6Q1Q8NGQ2 317 aa7.2□□□□□ -1.26
SCAMP1-202ENST00000506858 OR52I2Q8NH67 350 aa7.2□□□□□ -1.26
SCAMP1-202ENST00000506858 CREB3L1Q96BA8 519 aa7.2□□□□□ -1.26
SCAMP1-202ENST00000506858 UPRTQ96BW1 309 aa7.2□□□□□ -1.26
SCAMP1-202ENST00000506858 MMP27Q9H306 513 aa7.2□□□□□ -1.26
SCAMP1-202ENST00000506858 C12orf4Q9NQ89 552 aa7.2□□□□□ -1.26
SCAMP1-202ENST00000506858 BATF3Q9NR55 127 aa7.2□□□□□ -1.26
SCAMP1-202ENST00000506858 MBNL3Q9NUK0 354 aaKnown RBP7.2□□□□□ -1.26
SCAMP1-202ENST00000506858 IDI2-AS1Q9NZ38 188 aa7.2□□□□□ -1.26
SCAMP1-202ENST00000506858 OR1A1Q9P1Q5 309 aa7.2□□□□□ -1.26
SCAMP1-202ENST00000506858 KPTNQ9Y664 436 aa7.2□□□□□ -1.26
SCAMP1-202ENST00000506858 SERPINE3A8MV23 424 aa7.19□□□□□ -1.26
SCAMP1-202ENST00000506858 NPIPB11E5RHQ5 1161 aa7.19□□□□□ -1.26
SCAMP1-202ENST00000506858 H3BUI4 141 aa7.19□□□□□ -1.26
SCAMP1-202ENST00000506858 J3QLI3 93 aa7.19□□□□□ -1.26
SCAMP1-202ENST00000506858 M0R1W7 72 aa7.19□□□□□ -1.26
SCAMP1-202ENST00000506858 SDCBPO00560 298 aaPredicted RBP7.19□□□□□ -1.26
SCAMP1-202ENST00000506858 MELTFP08582 738 aa7.19□□□□□ -1.26
SCAMP1-202ENST00000506858 GZMHP20718 246 aa7.19□□□□□ -1.26
SCAMP1-202ENST00000506858 MRPS15P82914 257 aaKnown RBP7.19□□□□□ -1.26
SCAMP1-202ENST00000506858 SRSF2Q01130 221 aaKnown RBP7.19□□□□□ -1.26
SCAMP1-202ENST00000506858 PAX5Q02548 391 aa7.19□□□□□ -1.26
SCAMP1-202ENST00000506858 IL18Q14116 193 aa7.19□□□□□ -1.26
SCAMP1-202ENST00000506858 HERPUD1Q15011 391 aa7.19□□□□□ -1.26
SCAMP1-202ENST00000506858 HMGN3Q15651 99 aa7.19□□□□□ -1.26
SCAMP1-202ENST00000506858 FAM189A2Q15884 450 aa7.19□□□□□ -1.26
SCAMP1-202ENST00000506858 HEPN1Q6WQI6 88 aa7.19□□□□□ -1.26
SCAMP1-202ENST00000506858 LHFPL4Q7Z7J7 247 aa7.19□□□□□ -1.26
SCAMP1-202ENST00000506858 BEX2Q9BXY8 128 aa7.19□□□□□ -1.26
SCAMP1-202ENST00000506858 GAL3ST2Q9H3Q3 398 aa7.19□□□□□ -1.26
SCAMP1-202ENST00000506858 METTL8Q9H825 291 aaKnown RBP7.19□□□□□ -1.26
SCAMP1-202ENST00000506858 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.19□□□□□ -1.26
SCAMP1-202ENST00000506858 TAS2R3Q9NYW6 316 aa7.19□□□□□ -1.26
SCAMP1-202ENST00000506858 KCNIP1Q9NZI2 227 aa7.19□□□□□ -1.26
SCAMP1-202ENST00000506858 KLK11Q9UBX7 282 aa7.19□□□□□ -1.26
SCAMP1-202ENST00000506858 LPAR3Q9UBY5 353 aa7.19□□□□□ -1.26
SCAMP1-202ENST00000506858 SESN1Q9Y6P5 492 aa7.19□□□□□ -1.26
SCAMP1-202ENST00000506858 TRBV6-6A0A0A6YYG2 114 aa7.19□□□□□ -1.26
SCAMP1-202ENST00000506858 A0A0A6YYH2 397 aa7.19□□□□□ -1.26
SCAMP1-202ENST00000506858 FABP12A6NFH5 140 aa7.19□□□□□ -1.26
SCAMP1-202ENST00000506858 A6NJ64 397 aa7.19□□□□□ -1.26
SCAMP1-202ENST00000506858 TRDCB7Z8K6 153 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms