RNA–Protein interactions for RNA: ENST00000506098.5

NUP54-204, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-204ENST00000506098 IGHV2-5P01817 119 aa5.97□□□□□ -1.45
NUP54-204ENST00000506098 MT-ND4P03905 459 aa5.97□□□□□ -1.45
NUP54-204ENST00000506098 S100A8P05109 93 aa5.97□□□□□ -1.45
NUP54-204ENST00000506098 LPLP06858 475 aa5.97□□□□□ -1.45
NUP54-204ENST00000506098 CD3GP09693 182 aa5.97□□□□□ -1.45
NUP54-204ENST00000506098 CGB3P0DN86 165 aa5.97□□□□□ -1.45
NUP54-204ENST00000506098 CGB7P0DN87 165 aa5.97□□□□□ -1.45
NUP54-204ENST00000506098 PTHLHP12272 177 aa5.97□□□□□ -1.45
NUP54-204ENST00000506098 MEOX2P50222 304 aa5.97□□□□□ -1.45
NUP54-204ENST00000506098 DGCR2P98153 550 aa5.97□□□□□ -1.45
NUP54-204ENST00000506098 MEF2CQ06413 473 aaPredicted RBP5.97□□□□□ -1.45
NUP54-204ENST00000506098 AESQ08117 197 aa5.97□□□□□ -1.45
NUP54-204ENST00000506098 ARFRP1Q13795 201 aa5.97□□□□□ -1.45
NUP54-204ENST00000506098 GRK1Q15835 563 aa5.97□□□□□ -1.45
NUP54-204ENST00000506098 CARTPTQ16568 116 aa5.97□□□□□ -1.45
NUP54-204ENST00000506098 PYDC2Q56P42 97 aa5.97□□□□□ -1.45
NUP54-204ENST00000506098 LRRC10Q5BKY1 277 aa5.97□□□□□ -1.45
NUP54-204ENST00000506098 Q6ZPA2 131 aa5.97□□□□□ -1.45
NUP54-204ENST00000506098 SNX29P2Q8IUI4 249 aa5.97□□□□□ -1.45
NUP54-204ENST00000506098 Q8N402 240 aa5.97□□□□□ -1.45
NUP54-204ENST00000506098 OR8B3Q8NGG8 313 aa5.97□□□□□ -1.45
NUP54-204ENST00000506098 OR52I2Q8NH67 350 aa5.97□□□□□ -1.45
NUP54-204ENST00000506098 CLDND2Q8NHS1 167 aa5.97□□□□□ -1.45
NUP54-204ENST00000506098 C8orf46Q8TAG6 207 aa5.97□□□□□ -1.45
NUP54-204ENST00000506098 MRPL30Q8TCC3 161 aaKnown RBP5.97□□□□□ -1.45
NUP54-204ENST00000506098 NUDCD2Q8WVJ2 157 aa5.97□□□□□ -1.45
NUP54-204ENST00000506098 FCAMRQ8WWV6 532 aa5.97□□□□□ -1.45
NUP54-204ENST00000506098 DYRK2Q92630 601 aa5.97□□□□□ -1.45
NUP54-204ENST00000506098 CORO2AQ92828 525 aa5.97□□□□□ -1.45
NUP54-204ENST00000506098 C1orf159Q96HA4 380 aa5.97□□□□□ -1.45
NUP54-204ENST00000506098 DMRTB1Q96MA1 342 aa5.97□□□□□ -1.45
NUP54-204ENST00000506098 OR8B2Q96RD0 313 aa5.97□□□□□ -1.45
NUP54-204ENST00000506098 FOXC2Q99958 501 aa5.97□□□□□ -1.45
NUP54-204ENST00000506098 CCDC32Q9BV29 185 aa5.97□□□□□ -1.45
NUP54-204ENST00000506098 ALX4Q9H161 411 aaPredicted RBP5.97□□□□□ -1.45
NUP54-204ENST00000506098 Q9N2K0 584 aa5.97□□□□□ -1.45
NUP54-204ENST00000506098 ING3Q9NXR8 418 aa5.97□□□□□ -1.45
NUP54-204ENST00000506098 SLC25A10Q9UBX3 287 aaPredicted RBP5.97□□□□□ -1.45
NUP54-204ENST00000506098 ZNF107Q9UII5 783 aaPredicted RBP5.97□□□□□ -1.45
NUP54-204ENST00000506098 ZNF221Q9UK13 617 aa5.97□□□□□ -1.45
NUP54-204ENST00000506098 MGAT4AQ9UM21 535 aa5.97□□□□□ -1.45
NUP54-204ENST00000506098 POLR3KQ9Y2Y1 108 aaPredicted RBP5.97□□□□□ -1.45
NUP54-204ENST00000506098 AKAP9Q99996 3911 aa5.97□□□□□ -1.45
NUP54-204ENST00000506098 CCDC168Q8NDH2 2452 aa5.96□□□□□ -1.46
NUP54-204ENST00000506098 TMEM30CPA0ZSE6 113 aa5.96□□□□□ -1.46
NUP54-204ENST00000506098 A8MXK9 166 aa5.96□□□□□ -1.46
NUP54-204ENST00000506098 J3KRW8 73 aa5.96□□□□□ -1.46
NUP54-204ENST00000506098 HSPB6O14558 160 aa5.96□□□□□ -1.46
NUP54-204ENST00000506098 ORC5O43913 435 aa5.96□□□□□ -1.46
NUP54-204ENST00000506098 FCGR3AP08637 254 aa5.96□□□□□ -1.46
NUP54-204ENST00000506098 BMI1P35226 326 aa5.96□□□□□ -1.46
NUP54-204ENST00000506098 GLIPR1P48060 266 aa5.96□□□□□ -1.46
NUP54-204ENST00000506098 GUCA2AQ02747 115 aa5.96□□□□□ -1.46
NUP54-204ENST00000506098 MADCAM1Q13477 382 aa5.96□□□□□ -1.46
NUP54-204ENST00000506098 ATXN7L3Q14CW9 347 aaPredicted RBP5.96□□□□□ -1.46
NUP54-204ENST00000506098 BAK1Q16611 211 aa5.96□□□□□ -1.46
NUP54-204ENST00000506098 WDR25Q64LD2 544 aaPredicted RBP5.96□□□□□ -1.46
NUP54-204ENST00000506098 TRAT1Q6PIZ9 186 aa5.96□□□□□ -1.46
NUP54-204ENST00000506098 GDPD3Q7L5L3 318 aa5.96□□□□□ -1.46
NUP54-204ENST00000506098 MOB1BQ7L9L4 216 aa5.96□□□□□ -1.46
NUP54-204ENST00000506098 NLRC3Q7RTR2 1065 aa5.96□□□□□ -1.46
NUP54-204ENST00000506098 TRAPPC6BQ86SZ2 158 aa5.96□□□□□ -1.46
NUP54-204ENST00000506098 HOGA1Q86XE5 327 aa5.96□□□□□ -1.46
NUP54-204ENST00000506098 FGFRL1Q8N441 504 aa5.96□□□□□ -1.46
NUP54-204ENST00000506098 LY6G5BQ8NDX9 201 aa5.96□□□□□ -1.46
NUP54-204ENST00000506098 TMEM185AQ8NFB2 350 aa5.96□□□□□ -1.46
NUP54-204ENST00000506098 NEK7Q8TDX7 302 aa5.96□□□□□ -1.46
NUP54-204ENST00000506098 DEDD2Q8WXF8 326 aa5.96□□□□□ -1.46
NUP54-204ENST00000506098 GCDHQ92947 438 aaPredicted RBP5.96□□□□□ -1.46
NUP54-204ENST00000506098 RAB39BQ96DA2 213 aa5.96□□□□□ -1.46
NUP54-204ENST00000506098 TCEAL7Q9BRU2 100 aa5.96□□□□□ -1.46
NUP54-204ENST00000506098 HDHD3Q9BSH5 251 aaPredicted RBP5.96□□□□□ -1.46
NUP54-204ENST00000506098 THAP7Q9BT49 309 aaPredicted RBP5.96□□□□□ -1.46
NUP54-204ENST00000506098 DCTN5Q9BTE1 182 aa5.96□□□□□ -1.46
NUP54-204ENST00000506098 COA4Q9NYJ1 87 aa5.96□□□□□ -1.46
NUP54-204ENST00000506098 KLK11Q9UBX7 282 aa5.96□□□□□ -1.46
NUP54-204ENST00000506098 LPAR3Q9UBY5 353 aa5.96□□□□□ -1.46
NUP54-204ENST00000506098 OPN4Q9UHM6 478 aa5.96□□□□□ -1.46
NUP54-204ENST00000506098 KIF25Q9UIL4 384 aa5.96□□□□□ -1.46
NUP54-204ENST00000506098 PCDHB10Q9UN67 800 aa5.96□□□□□ -1.46
NUP54-204ENST00000506098 CSPG4Q6UVK1 2322 aa5.96□□□□□ -1.46
NUP54-204ENST00000506098 TEX15Q9BXT5 2789 aa5.95□□□□□ -1.46
NUP54-204ENST00000506098 TRBV23-1A0A0A0MS06 115 aa5.95□□□□□ -1.46
NUP54-204ENST00000506098 TRAV20A0A0B4J274 112 aa5.95□□□□□ -1.46
NUP54-204ENST00000506098 IGHV4-61A0A0C4DH41 118 aa5.95□□□□□ -1.46
NUP54-204ENST00000506098 ANKRD20A5PA0PJZ0 165 aa5.95□□□□□ -1.46
NUP54-204ENST00000506098 ODAMA1E959 279 aa5.95□□□□□ -1.46
NUP54-204ENST00000506098 KIAA1324LA8MWY0 1029 aaPredicted RBP5.95□□□□□ -1.46
NUP54-204ENST00000506098 J3QRK9 145 aa5.95□□□□□ -1.46
NUP54-204ENST00000506098 LANCL1O43813 399 aa5.95□□□□□ -1.46
NUP54-204ENST00000506098 UPK1BO75841 260 aa5.95□□□□□ -1.46
NUP54-204ENST00000506098 DIRAS3O95661 229 aa5.95□□□□□ -1.46
NUP54-204ENST00000506098 PTTG1O95997 202 aa5.95□□□□□ -1.46
NUP54-204ENST00000506098 FABP1P07148 127 aa5.95□□□□□ -1.46
NUP54-204ENST00000506098 IL7P13232 177 aa5.95□□□□□ -1.46
NUP54-204ENST00000506098 NDUFB7P17568 137 aa5.95□□□□□ -1.46
NUP54-204ENST00000506098 GZMHP20718 246 aa5.95□□□□□ -1.46
NUP54-204ENST00000506098 ACTBP60709 375 aa5.95□□□□□ -1.46
NUP54-204ENST00000506098 SEC61A1P61619 476 aaKnown RBP5.95□□□□□ -1.46
NUP54-204ENST00000506098 GNB2P62879 340 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms