RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 PRR25Q96S07 402 aa12.62□□□□□ -0.39
PDLIM7-213ENST00000505074 IFT22Q9H7X7 185 aa12.62□□□□□ -0.39
PDLIM7-213ENST00000505074 BABAM2Q9NXR7 383 aa12.62□□□□□ -0.39
PDLIM7-213ENST00000505074 TRAPPC2LQ9UL33 140 aa12.62□□□□□ -0.39
PDLIM7-213ENST00000505074 SIRT4Q9Y6E7 314 aaPredicted RBP12.62□□□□□ -0.39
PDLIM7-213ENST00000505074 MCRIP1C9JLW8 97 aa12.61□□□□□ -0.39
PDLIM7-213ENST00000505074 MYCNOSP40205 109 aa12.61□□□□□ -0.39
PDLIM7-213ENST00000505074 GP2P55259 537 aaKnown RBP12.61□□□□□ -0.39
PDLIM7-213ENST00000505074 LRRC36Q1X8D7 754 aa12.61□□□□□ -0.39
PDLIM7-213ENST00000505074 C18orf65Q6ZTR6 163 aa12.61□□□□□ -0.39
PDLIM7-213ENST00000505074 STPG2Q8N412 459 aa12.61□□□□□ -0.39
PDLIM7-213ENST00000505074 OR2T10Q8NGZ9 312 aa12.61□□□□□ -0.39
PDLIM7-213ENST00000505074 GHSRQ92847 366 aa12.61□□□□□ -0.39
PDLIM7-213ENST00000505074 MUL1Q969V5 352 aa12.61□□□□□ -0.39
PDLIM7-213ENST00000505074 EAF1Q96JC9 268 aaPredicted RBP12.61□□□□□ -0.39
PDLIM7-213ENST00000505074 RDH12Q96NR8 316 aa12.61□□□□□ -0.39
PDLIM7-213ENST00000505074 RCHY1Q96PM5 261 aa12.61□□□□□ -0.39
PDLIM7-213ENST00000505074 GFOD1Q9NXC2 390 aa12.61□□□□□ -0.39
PDLIM7-213ENST00000505074 GNG12Q9UBI6 72 aa12.61□□□□□ -0.39
PDLIM7-213ENST00000505074 NKX1-2Q9UD57 310 aaPredicted RBP12.61□□□□□ -0.39
PDLIM7-213ENST00000505074 CLEC2DQ9UHP7 191 aa12.61□□□□□ -0.39
PDLIM7-213ENST00000505074 DIMT1Q9UNQ2 313 aaKnown RBP12.61□□□□□ -0.39
PDLIM7-213ENST00000505074 MRPS28Q9Y2Q9 187 aaKnown RBP12.61□□□□□ -0.39
PDLIM7-213ENST00000505074 DNAH1Q9P2D7 4330 aa12.6□□□□□ -0.39
PDLIM7-213ENST00000505074 A0A1W2PPK0 400 aa12.6□□□□□ -0.39
PDLIM7-213ENST00000505074 MAGEA13PA6NCF6 341 aa12.6□□□□□ -0.39
PDLIM7-213ENST00000505074 C15orf65H3BRN8 121 aa12.6□□□□□ -0.39
PDLIM7-213ENST00000505074 OGG1O15527 345 aa12.6□□□□□ -0.39
PDLIM7-213ENST00000505074 SPINT2O43291 252 aa12.6□□□□□ -0.39
PDLIM7-213ENST00000505074 LALBAP00709 142 aa12.6□□□□□ -0.39
PDLIM7-213ENST00000505074 IGHG2P01859 326 aa12.6□□□□□ -0.39
PDLIM7-213ENST00000505074 GPR176Q14439 515 aa12.6□□□□□ -0.39
PDLIM7-213ENST00000505074 Q499Y3 187 aa12.6□□□□□ -0.39
PDLIM7-213ENST00000505074 AWAT2Q6E213 333 aa12.6□□□□□ -0.39
PDLIM7-213ENST00000505074 FAM53AQ6NSI3 398 aaPredicted RBP12.6□□□□□ -0.39
PDLIM7-213ENST00000505074 ZNF497Q6ZNH5 498 aa12.6□□□□□ -0.39
PDLIM7-213ENST00000505074 COMMD1Q8N668 190 aa12.6□□□□□ -0.39
PDLIM7-213ENST00000505074 OR10V1Q8NGI7 309 aa12.6□□□□□ -0.39
PDLIM7-213ENST00000505074 OR52M1Q8NGK5 317 aa12.6□□□□□ -0.39
PDLIM7-213ENST00000505074 TMEM80Q96HE8 168 aa12.6□□□□□ -0.39
PDLIM7-213ENST00000505074 DUX3Q96PT4 197 aa12.6□□□□□ -0.39
PDLIM7-213ENST00000505074 SPACA1Q9HBV2 294 aa12.6□□□□□ -0.39
PDLIM7-213ENST00000505074 RAB9BQ9NP90 201 aa12.6□□□□□ -0.39
PDLIM7-213ENST00000505074 ZFP57Q9NU63 452 aa12.6□□□□□ -0.39
PDLIM7-213ENST00000505074 ETAA1Q9NY74 926 aa12.6□□□□□ -0.39
PDLIM7-213ENST00000505074 TRAV8-7A0A075B6U6 113 aa12.59□□□□□ -0.39
PDLIM7-213ENST00000505074 AP4M1O00189 453 aa12.59□□□□□ -0.39
PDLIM7-213ENST00000505074 EBAG9O00559 213 aa12.59□□□□□ -0.39
PDLIM7-213ENST00000505074 ORC5O43913 435 aa12.59□□□□□ -0.39
PDLIM7-213ENST00000505074 MAS1P04201 325 aa12.59□□□□□ -0.39
PDLIM7-213ENST00000505074 IGFBP3P17936 291 aaPredicted RBP12.59□□□□□ -0.39
PDLIM7-213ENST00000505074 SLC6A1P30531 599 aa12.59□□□□□ -0.39
PDLIM7-213ENST00000505074 YIF1BQ5BJH7 314 aa12.59□□□□□ -0.39
PDLIM7-213ENST00000505074 SYT6Q5T7P8 510 aaPredicted RBP12.59□□□□□ -0.39
PDLIM7-213ENST00000505074 GLIPR1L1Q6UWM5 242 aa12.59□□□□□ -0.39
PDLIM7-213ENST00000505074 TGIF2LXQ8IUE1 241 aa12.59□□□□□ -0.39
PDLIM7-213ENST00000505074 ZNF695Q8IW36 515 aa12.59□□□□□ -0.39
PDLIM7-213ENST00000505074 IZUMO1Q8IYV9 350 aa12.59□□□□□ -0.39
PDLIM7-213ENST00000505074 SETD9Q8NE22 299 aa12.59□□□□□ -0.39
PDLIM7-213ENST00000505074 OR4K15Q8NH41 348 aa12.59□□□□□ -0.39
PDLIM7-213ENST00000505074 RTN4IP1Q8WWV3 396 aaPredicted RBP12.59□□□□□ -0.39
PDLIM7-213ENST00000505074 OR14A2Q96R54 314 aa12.59□□□□□ -0.39
PDLIM7-213ENST00000505074 LYSTQ99698 3801 aa12.59□□□□□ -0.39
PDLIM7-213ENST00000505074 RASL11BQ9BPW5 248 aa12.59□□□□□ -0.39
PDLIM7-213ENST00000505074 DNAH7Q8WXX0 4024 aa12.58□□□□□ -0.4
PDLIM7-213ENST00000505074 TRBV5-5A0A0J9YX44 114 aa12.58□□□□□ -0.4
PDLIM7-213ENST00000505074 LINC01548A6NM66 108 aa12.58□□□□□ -0.4
PDLIM7-213ENST00000505074 RRP9O43818 475 aaKnown RBP12.58□□□□□ -0.4
PDLIM7-213ENST00000505074 CRTAPO75718 401 aaPredicted RBP12.58□□□□□ -0.4
PDLIM7-213ENST00000505074 MT-ND4P03905 459 aa12.58□□□□□ -0.4
PDLIM7-213ENST00000505074 GPR12P47775 334 aa12.58□□□□□ -0.4
PDLIM7-213ENST00000505074 CXorf66Q5JRM2 361 aaPredicted RBP12.58□□□□□ -0.4
PDLIM7-213ENST00000505074 C6orf183Q5T699 404 aa12.58□□□□□ -0.4
PDLIM7-213ENST00000505074 TTC23Q5W5X9 447 aa12.58□□□□□ -0.4
PDLIM7-213ENST00000505074 DMKNQ6E0U4 476 aaPredicted RBP12.58□□□□□ -0.4
PDLIM7-213ENST00000505074 RAB12Q6IQ22 244 aa12.58□□□□□ -0.4
PDLIM7-213ENST00000505074 TEX38Q6PEX7 206 aa12.58□□□□□ -0.4
PDLIM7-213ENST00000505074 LINC00311Q8N616 119 aa12.58□□□□□ -0.4
PDLIM7-213ENST00000505074 P2RX4Q99571 388 aa12.58□□□□□ -0.4
PDLIM7-213ENST00000505074 GON7Q9BXV9 100 aa12.58□□□□□ -0.4
PDLIM7-213ENST00000505074 SELENOIQ9C0D9 397 aa12.58□□□□□ -0.4
PDLIM7-213ENST00000505074 ABCG5Q9H222 651 aa12.58□□□□□ -0.4
PDLIM7-213ENST00000505074 BANF2Q9H503 90 aa12.58□□□□□ -0.4
PDLIM7-213ENST00000505074 LIN7CQ9NUP9 197 aaKnown RBP12.58□□□□□ -0.4
PDLIM7-213ENST00000505074 PEX16Q9Y5Y5 336 aa12.58□□□□□ -0.4
PDLIM7-213ENST00000505074 C12orf77C9JDV5 145 aa12.57□□□□□ -0.4
PDLIM7-213ENST00000505074 SLC31A2O15432 143 aa12.57□□□□□ -0.4
PDLIM7-213ENST00000505074 TXNL1O43396 289 aa12.57□□□□□ -0.4
PDLIM7-213ENST00000505074 MOSP00540 346 aa12.57□□□□□ -0.4
PDLIM7-213ENST00000505074 FSTP19883 344 aa12.57□□□□□ -0.4
PDLIM7-213ENST00000505074 CD1BP29016 333 aa12.57□□□□□ -0.4
PDLIM7-213ENST00000505074 ECI1P42126 302 aa12.57□□□□□ -0.4
PDLIM7-213ENST00000505074 TAS2R43P59537 309 aa12.57□□□□□ -0.4
PDLIM7-213ENST00000505074 EBI3Q14213 229 aa12.57□□□□□ -0.4
PDLIM7-213ENST00000505074 ZFAND6Q6FIF0 208 aa12.57□□□□□ -0.4
PDLIM7-213ENST00000505074 LCNL1Q6ZST4 164 aa12.57□□□□□ -0.4
PDLIM7-213ENST00000505074 Q8N9W7 124 aa12.57□□□□□ -0.4
PDLIM7-213ENST00000505074 UBE2QL1A1L167 161 aa12.56□□□□□ -0.4
PDLIM7-213ENST00000505074 ZNF736B4DX44 427 aaPredicted RBP12.56□□□□□ -0.4
PDLIM7-213ENST00000505074 MYL12BO14950 172 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms