RNA–Protein interactions for RNA: ENST00000504327.1

PDLIM1P4-201, Transcript of PDZ and LIM domain 1 pseudogene 4, humanhuman

BASIC

Gene PDLIM1P4, Length 1,006 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P4-201ENST00000504327 ASPMQ8IZT6 3477 aa3.28□□□□□ -1.88
PDLIM1P4-201ENST00000504327 IGHV3OR16-13A0A075B7E8 117 aa3.28□□□□□ -1.88
PDLIM1P4-201ENST00000504327 A0A0G2JRQ6 117 aa3.28□□□□□ -1.88
PDLIM1P4-201ENST00000504327 AGPAT2O15120 278 aa3.28□□□□□ -1.88
PDLIM1P4-201ENST00000504327 CRLF1O75462 422 aa3.28□□□□□ -1.88
PDLIM1P4-201ENST00000504327 OR2B3O76000 313 aa3.28□□□□□ -1.88
PDLIM1P4-201ENST00000504327 SNAPINO95295 136 aa3.28□□□□□ -1.88
PDLIM1P4-201ENST00000504327 CD74P04233 296 aa3.28□□□□□ -1.88
PDLIM1P4-201ENST00000504327 SEMG1P04279 462 aa3.28□□□□□ -1.88
PDLIM1P4-201ENST00000504327 MYL12AP19105 171 aa3.28□□□□□ -1.88
PDLIM1P4-201ENST00000504327 ALOX5APP20292 161 aa3.28□□□□□ -1.88
PDLIM1P4-201ENST00000504327 IGHV1-2P23083 117 aa3.28□□□□□ -1.88
PDLIM1P4-201ENST00000504327 RPL12P30050 165 aaKnown RBP3.28□□□□□ -1.88
PDLIM1P4-201ENST00000504327 RPL22P35268 128 aaKnown RBP3.28□□□□□ -1.88
PDLIM1P4-201ENST00000504327 PMELP40967 661 aa3.28□□□□□ -1.88
PDLIM1P4-201ENST00000504327 PPOXP50336 477 aa3.28□□□□□ -1.88
PDLIM1P4-201ENST00000504327 RND2P52198 227 aa3.28□□□□□ -1.88
PDLIM1P4-201ENST00000504327 NDUFV3P56181 108 aaKnown RBP3.28□□□□□ -1.88
PDLIM1P4-201ENST00000504327 ZNF146Q15072 292 aa3.28□□□□□ -1.88
PDLIM1P4-201ENST00000504327 HIST3H3Q16695 136 aa3.28□□□□□ -1.88
PDLIM1P4-201ENST00000504327 C17orf58Q2M2W7 97 aa3.28□□□□□ -1.88
PDLIM1P4-201ENST00000504327 ANKRD22Q5VYY1 191 aa3.28□□□□□ -1.88
PDLIM1P4-201ENST00000504327 DHRS4L2Q6PKH6 230 aa3.28□□□□□ -1.88
PDLIM1P4-201ENST00000504327 BAIAP2L2Q6UXY1 529 aa3.28□□□□□ -1.88
PDLIM1P4-201ENST00000504327 C3orf62Q6ZUJ4 267 aa3.28□□□□□ -1.88
PDLIM1P4-201ENST00000504327 Q6ZVH6 145 aa3.28□□□□□ -1.88
PDLIM1P4-201ENST00000504327 NOTCH2NLQ7Z3S9 236 aa3.28□□□□□ -1.88
PDLIM1P4-201ENST00000504327 OAFQ86UD1 273 aa3.28□□□□□ -1.88
PDLIM1P4-201ENST00000504327 CDC20BQ86Y33 519 aa3.28□□□□□ -1.88
PDLIM1P4-201ENST00000504327 PRSS58Q8IYP2 241 aa3.28□□□□□ -1.88
PDLIM1P4-201ENST00000504327 OR6V1Q8N148 313 aa3.28□□□□□ -1.88
PDLIM1P4-201ENST00000504327 ZNF567Q8N184 647 aa3.28□□□□□ -1.88
PDLIM1P4-201ENST00000504327 GAPTQ8N292 157 aa3.28□□□□□ -1.88
PDLIM1P4-201ENST00000504327 OR10X1Q8NGY0 326 aa3.28□□□□□ -1.88
PDLIM1P4-201ENST00000504327 HAVCR2Q8TDQ0 301 aa3.28□□□□□ -1.88
PDLIM1P4-201ENST00000504327 KLK6Q92876 244 aa3.28□□□□□ -1.88
PDLIM1P4-201ENST00000504327 PRAC1Q96KF2 57 aa3.28□□□□□ -1.88
PDLIM1P4-201ENST00000504327 BMFQ96LC9 184 aa3.28□□□□□ -1.88
PDLIM1P4-201ENST00000504327 TRIB3Q96RU7 358 aa3.28□□□□□ -1.88
PDLIM1P4-201ENST00000504327 KLF6Q99612 283 aaPredicted RBP3.28□□□□□ -1.88
PDLIM1P4-201ENST00000504327 DOK1Q99704 481 aa3.28□□□□□ -1.88
PDLIM1P4-201ENST00000504327 SULT4A1Q9BR01 284 aa3.28□□□□□ -1.88
PDLIM1P4-201ENST00000504327 TMEM109Q9BVC6 243 aa3.28□□□□□ -1.88
PDLIM1P4-201ENST00000504327 MS4A6AQ9H2W1 248 aa3.28□□□□□ -1.88
PDLIM1P4-201ENST00000504327 GLTPQ9NZD2 209 aa3.28□□□□□ -1.88
PDLIM1P4-201ENST00000504327 VPS29Q9UBQ0 182 aa3.28□□□□□ -1.88
PDLIM1P4-201ENST00000504327 TP53TG5Q9Y2B4 290 aa3.28□□□□□ -1.88
PDLIM1P4-201ENST00000504327 ALG5Q9Y673 324 aa3.28□□□□□ -1.88
PDLIM1P4-201ENST00000504327 RP1P56715 2156 aa3.28□□□□□ -1.88
PDLIM1P4-201ENST00000504327 DMXL2Q8TDJ6 3036 aa3.27□□□□□ -1.89
PDLIM1P4-201ENST00000504327 AHCTF1Q8WYP5 2266 aa3.27□□□□□ -1.89
PDLIM1P4-201ENST00000504327 LOC285095A0A1B0GVY8 99 aa3.27□□□□□ -1.89
PDLIM1P4-201ENST00000504327 DISC1C4P0D8 188 aa3.27□□□□□ -1.89
PDLIM1P4-201ENST00000504327 H7C1H1 209 aa3.27□□□□□ -1.89
PDLIM1P4-201ENST00000504327 CNIH1O95406 144 aa3.27□□□□□ -1.89
PDLIM1P4-201ENST00000504327 THY1P04216 161 aa3.27□□□□□ -1.89
PDLIM1P4-201ENST00000504327 CD5P06127 495 aa3.27□□□□□ -1.89
PDLIM1P4-201ENST00000504327 CD99P14209 185 aa3.27□□□□□ -1.89
PDLIM1P4-201ENST00000504327 GNB3P16520 340 aa3.27□□□□□ -1.89
PDLIM1P4-201ENST00000504327 ZNF30P17039 623 aa3.27□□□□□ -1.89
PDLIM1P4-201ENST00000504327 ATF1P18846 271 aa3.27□□□□□ -1.89
PDLIM1P4-201ENST00000504327 HTR1EP28566 365 aa3.27□□□□□ -1.89
PDLIM1P4-201ENST00000504327 PYCR1P32322 319 aa3.27□□□□□ -1.89
PDLIM1P4-201ENST00000504327 NUDT1P36639 197 aa3.27□□□□□ -1.89
PDLIM1P4-201ENST00000504327 VSX2P58304 361 aaPredicted RBP3.27□□□□□ -1.89
PDLIM1P4-201ENST00000504327 MTPNP58546 118 aa3.27□□□□□ -1.89
PDLIM1P4-201ENST00000504327 RPS21P63220 83 aaKnown RBP3.27□□□□□ -1.89
PDLIM1P4-201ENST00000504327 TNFRSF9Q07011 255 aa3.27□□□□□ -1.89
PDLIM1P4-201ENST00000504327 BAXQ07812 192 aa3.27□□□□□ -1.89
PDLIM1P4-201ENST00000504327 OR2F1Q13607 317 aa3.27□□□□□ -1.89
PDLIM1P4-201ENST00000504327 FZD2Q14332 565 aa3.27□□□□□ -1.89
PDLIM1P4-201ENST00000504327 ZNF266Q14584 549 aa3.27□□□□□ -1.89
PDLIM1P4-201ENST00000504327 C4orf26Q17RF5 130 aa3.27□□□□□ -1.89
PDLIM1P4-201ENST00000504327 CDNFQ49AH0 187 aa3.27□□□□□ -1.89
PDLIM1P4-201ENST00000504327 SPANXN3Q5MJ09 141 aa3.27□□□□□ -1.89
PDLIM1P4-201ENST00000504327 AVPI1Q5T686 147 aa3.27□□□□□ -1.89
PDLIM1P4-201ENST00000504327 KCTD16Q68DU8 428 aa3.27□□□□□ -1.89
PDLIM1P4-201ENST00000504327 TNFAIP8L2Q6P589 184 aaPredicted RBP3.27□□□□□ -1.89
PDLIM1P4-201ENST00000504327 ZNF497Q6ZNH5 498 aa3.27□□□□□ -1.89
PDLIM1P4-201ENST00000504327 RFLNAQ6ZTI6 216 aa3.27□□□□□ -1.89
PDLIM1P4-201ENST00000504327 C17orf82Q86X59 251 aaPredicted RBP3.27□□□□□ -1.89
PDLIM1P4-201ENST00000504327 SLC22A18ASQ8N1D0 253 aa3.27□□□□□ -1.89
PDLIM1P4-201ENST00000504327 ZADH2Q8N4Q0 377 aa3.27□□□□□ -1.89
PDLIM1P4-201ENST00000504327 GATD1Q8NB37 220 aa3.27□□□□□ -1.89
PDLIM1P4-201ENST00000504327 ZNF485Q8NCK3 441 aa3.27□□□□□ -1.89
PDLIM1P4-201ENST00000504327 OR6K3Q8NGY3 331 aa3.27□□□□□ -1.89
PDLIM1P4-201ENST00000504327 ZNF519Q8TB69 540 aa3.27□□□□□ -1.89
PDLIM1P4-201ENST00000504327 RASSF5Q8WWW0 418 aa3.27□□□□□ -1.89
PDLIM1P4-201ENST00000504327 PGLYRP3Q96LB9 341 aa3.27□□□□□ -1.89
PDLIM1P4-201ENST00000504327 RDH12Q96NR8 316 aa3.27□□□□□ -1.89
PDLIM1P4-201ENST00000504327 ZIM3Q96PE6 472 aa3.27□□□□□ -1.89
PDLIM1P4-201ENST00000504327 LYSMD1Q96S90 227 aa3.27□□□□□ -1.89
PDLIM1P4-201ENST00000504327 PITX2Q99697 317 aa3.27□□□□□ -1.89
PDLIM1P4-201ENST00000504327 TBL1YQ9BQ87 522 aa3.27□□□□□ -1.89
PDLIM1P4-201ENST00000504327 KIFC1Q9BW19 673 aa3.27□□□□□ -1.89
PDLIM1P4-201ENST00000504327 DDA1Q9BW61 102 aa3.27□□□□□ -1.89
PDLIM1P4-201ENST00000504327 PECRQ9BY49 303 aa3.27□□□□□ -1.89
PDLIM1P4-201ENST00000504327 SLC17A9Q9BYT1 436 aa3.27□□□□□ -1.89
PDLIM1P4-201ENST00000504327 OCR1Q9BZK8 76 aa3.27□□□□□ -1.89
PDLIM1P4-201ENST00000504327 PARLQ9H300 379 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms