RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 CAPGP40121 348 aa12.87□□□□□ -0.35
SCLT1-204ENST00000503215 INSL4Q14641 139 aa12.87□□□□□ -0.35
SCLT1-204ENST00000503215 MPV17LQ2QL34 196 aa12.87□□□□□ -0.35
SCLT1-204ENST00000503215 ZNF497Q6ZNH5 498 aa12.87□□□□□ -0.35
SCLT1-204ENST00000503215 C18orf65Q6ZTR6 163 aa12.87□□□□□ -0.35
SCLT1-204ENST00000503215 AHSA2Q719I0 299 aa12.87□□□□□ -0.35
SCLT1-204ENST00000503215 TMEM104Q8NE00 496 aa12.87□□□□□ -0.35
SCLT1-204ENST00000503215 NEK7Q8TDX7 302 aa12.87□□□□□ -0.35
SCLT1-204ENST00000503215 FBLIM1Q8WUP2 373 aa12.87□□□□□ -0.35
SCLT1-204ENST00000503215 SGCDQ92629 289 aa12.87□□□□□ -0.35
SCLT1-204ENST00000503215 DERL3Q96Q80 235 aa12.87□□□□□ -0.35
SCLT1-204ENST00000503215 PCDHB16Q9NRJ7 776 aa12.87□□□□□ -0.35
SCLT1-204ENST00000503215 PAK1IP1Q9NWT1 392 aaPredicted RBP12.87□□□□□ -0.35
SCLT1-204ENST00000503215 AURKAIP1Q9NWT8 199 aaPredicted RBP12.87□□□□□ -0.35
SCLT1-204ENST00000503215 TSSC4Q9Y5U2 329 aaPredicted RBP12.87□□□□□ -0.35
SCLT1-204ENST00000503215 EFCAB10A6NFE3 127 aa12.86□□□□□ -0.35
SCLT1-204ENST00000503215 ZNF736B4DX44 427 aaPredicted RBP12.86□□□□□ -0.35
SCLT1-204ENST00000503215 M0QZK8 103 aa12.86□□□□□ -0.35
SCLT1-204ENST00000503215 SDCBPO00560 298 aaPredicted RBP12.86□□□□□ -0.35
SCLT1-204ENST00000503215 PF4V1P10720 104 aa12.86□□□□□ -0.35
SCLT1-204ENST00000503215 CELP19835 753 aa12.86□□□□□ -0.35
SCLT1-204ENST00000503215 FSTP19883 344 aa12.86□□□□□ -0.35
SCLT1-204ENST00000503215 ALDH3B2P48448 385 aa12.86□□□□□ -0.35
SCLT1-204ENST00000503215 RAB7AP51149 207 aa12.86□□□□□ -0.35
SCLT1-204ENST00000503215 KHDC1LQ5JSQ8 128 aa12.86□□□□□ -0.35
SCLT1-204ENST00000503215 SIGIRRQ6IA17 410 aa12.86□□□□□ -0.35
SCLT1-204ENST00000503215 SLC16A12Q6ZSM3 486 aa12.86□□□□□ -0.35
SCLT1-204ENST00000503215 MOB3BQ86TA1 216 aa12.86□□□□□ -0.35
SCLT1-204ENST00000503215 LINC00596Q86U02 117 aa12.86□□□□□ -0.35
SCLT1-204ENST00000503215 OR8H3Q8N146 312 aa12.86□□□□□ -0.35
SCLT1-204ENST00000503215 BPIFB6Q8NFQ5 453 aa12.86□□□□□ -0.35
SCLT1-204ENST00000503215 OR4K15Q8NH41 348 aa12.86□□□□□ -0.35
SCLT1-204ENST00000503215 PALMDQ9NP74 551 aa12.86□□□□□ -0.35
SCLT1-204ENST00000503215 C8orf4Q9NR00 106 aa12.86□□□□□ -0.35
SCLT1-204ENST00000503215 GFOD1Q9NXC2 390 aa12.86□□□□□ -0.35
SCLT1-204ENST00000503215 RCC2Q9P258 522 aaKnown RBP12.86□□□□□ -0.35
SCLT1-204ENST00000503215 CKLFQ9UBR5 152 aa12.86□□□□□ -0.35
SCLT1-204ENST00000503215 RSL24D1Q9UHA3 163 aaKnown RBP12.86□□□□□ -0.35
SCLT1-204ENST00000503215 DNAH3Q8TD57 4116 aa12.86□□□□□ -0.35
SCLT1-204ENST00000503215 IGHV1-3A0A0C4DH29 117 aa12.85□□□□□ -0.35
SCLT1-204ENST00000503215 C12orf77C9JDV5 145 aa12.85□□□□□ -0.35
SCLT1-204ENST00000503215 AIPO00170 330 aa12.85□□□□□ -0.35
SCLT1-204ENST00000503215 CCRL2O00421 344 aa12.85□□□□□ -0.35
SCLT1-204ENST00000503215 HSD17B6O14756 317 aa12.85□□□□□ -0.35
SCLT1-204ENST00000503215 ZNF780AO75290 641 aaPredicted RBP12.85□□□□□ -0.35
SCLT1-204ENST00000503215 CD33P20138 364 aa12.85□□□□□ -0.35
SCLT1-204ENST00000503215 ZNF134P52741 427 aa12.85□□□□□ -0.35
SCLT1-204ENST00000503215 GP2P55259 537 aaKnown RBP12.85□□□□□ -0.35
SCLT1-204ENST00000503215 ZNF816Q0VGE8 651 aaPredicted RBP12.85□□□□□ -0.35
SCLT1-204ENST00000503215 Q6ZNX1 250 aa12.85□□□□□ -0.35
SCLT1-204ENST00000503215 C8orf59Q8N0T1 100 aaPredicted RBP12.85□□□□□ -0.35
SCLT1-204ENST00000503215 OR4X2Q8NGF9 303 aa12.85□□□□□ -0.35
SCLT1-204ENST00000503215 OR1L1Q8NH94 360 aa12.85□□□□□ -0.35
SCLT1-204ENST00000503215 ST6GALNAC6Q969X2 333 aa12.85□□□□□ -0.35
SCLT1-204ENST00000503215 EAF1Q96JC9 268 aaPredicted RBP12.85□□□□□ -0.35
SCLT1-204ENST00000503215 NECAP2Q9NVZ3 263 aa12.85□□□□□ -0.35
SCLT1-204ENST00000503215 FKBP14Q9NWM8 211 aa12.85□□□□□ -0.35
SCLT1-204ENST00000503215 CNOT2Q9NZN8 540 aaKnown RBP12.85□□□□□ -0.35
SCLT1-204ENST00000503215 PSMB11A5LHX3 300 aa12.84□□□□□ -0.35
SCLT1-204ENST00000503215 ORC5O43913 435 aa12.84□□□□□ -0.35
SCLT1-204ENST00000503215 RCC1P18754 421 aaPredicted RBP12.84□□□□□ -0.35
SCLT1-204ENST00000503215 FAM27D1Q5T7N8 215 aa12.84□□□□□ -0.35
SCLT1-204ENST00000503215 SYT6Q5T7P8 510 aaPredicted RBP12.84□□□□□ -0.35
SCLT1-204ENST00000503215 AWAT2Q6E213 333 aa12.84□□□□□ -0.35
SCLT1-204ENST00000503215 RAB12Q6IQ22 244 aa12.84□□□□□ -0.35
SCLT1-204ENST00000503215 STX19Q8N4C7 294 aa12.84□□□□□ -0.35
SCLT1-204ENST00000503215 LINC00311Q8N616 119 aa12.84□□□□□ -0.35
SCLT1-204ENST00000503215 NANOGP1Q8N7R0 232 aa12.84□□□□□ -0.35
SCLT1-204ENST00000503215 OR10V1Q8NGI7 309 aa12.84□□□□□ -0.35
SCLT1-204ENST00000503215 OR52M1Q8NGK5 317 aa12.84□□□□□ -0.35
SCLT1-204ENST00000503215 MRAPQ8TCY5 172 aa12.84□□□□□ -0.35
SCLT1-204ENST00000503215 SELENOIQ9C0D9 397 aa12.84□□□□□ -0.35
SCLT1-204ENST00000503215 PLCXD1Q9NUJ7 323 aa12.84□□□□□ -0.35
SCLT1-204ENST00000503215 PEX16Q9Y5Y5 336 aa12.84□□□□□ -0.35
SCLT1-204ENST00000503215 CEPT1Q9Y6K0 416 aa12.84□□□□□ -0.35
SCLT1-204ENST00000503215 UBE2QL1A1L167 161 aa12.83□□□□□ -0.36
SCLT1-204ENST00000503215 TRIM64CA6NLI5 447 aa12.83□□□□□ -0.36
SCLT1-204ENST00000503215 MCRIP1C9JLW8 97 aa12.83□□□□□ -0.36
SCLT1-204ENST00000503215 PF4P02776 101 aa12.83□□□□□ -0.36
SCLT1-204ENST00000503215 GAPDHP04406 335 aaKnown RBP12.83□□□□□ -0.36
SCLT1-204ENST00000503215 MGMTP16455 207 aa12.83□□□□□ -0.36
SCLT1-204ENST00000503215 WNT4P56705 351 aa12.83□□□□□ -0.36
SCLT1-204ENST00000503215 EBI3Q14213 229 aa12.83□□□□□ -0.36
SCLT1-204ENST00000503215 GPR176Q14439 515 aa12.83□□□□□ -0.36
SCLT1-204ENST00000503215 CT45A1Q5HYN5 189 aa12.83□□□□□ -0.36
SCLT1-204ENST00000503215 ETV3LQ6ZN32 361 aa12.83□□□□□ -0.36
SCLT1-204ENST00000503215 Q8N6K4 173 aa12.83□□□□□ -0.36
SCLT1-204ENST00000503215 ZNF439Q8NDP4 499 aa12.83□□□□□ -0.36
SCLT1-204ENST00000503215 CT45A3Q8NHU0 189 aa12.83□□□□□ -0.36
SCLT1-204ENST00000503215 FAM46BQ96A09 425 aa12.83□□□□□ -0.36
SCLT1-204ENST00000503215 PLSCR3Q9NRY6 295 aa12.83□□□□□ -0.36
SCLT1-204ENST00000503215 TRAPPC2LQ9UL33 140 aa12.83□□□□□ -0.36
SCLT1-204ENST00000503215 SERPINE3A8MV23 424 aa12.82□□□□□ -0.36
SCLT1-204ENST00000503215 MYL12BO14950 172 aa12.82□□□□□ -0.36
SCLT1-204ENST00000503215 CRTAPO75718 401 aaPredicted RBP12.82□□□□□ -0.36
SCLT1-204ENST00000503215 HBZP02008 142 aa12.82□□□□□ -0.36
SCLT1-204ENST00000503215 TAS2R43P59537 309 aa12.82□□□□□ -0.36
SCLT1-204ENST00000503215 KRTAP10-11P60412 298 aa12.82□□□□□ -0.36
SCLT1-204ENST00000503215 OR10K2Q6IF99 312 aa12.82□□□□□ -0.36
SCLT1-204ENST00000503215 REC114Q7Z4M0 266 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms