RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 HEXAP06865 529 aa18.42■□□□□ 0.54
PTPN13-205ENST00000502971 S100GP29377 79 aa18.42■□□□□ 0.54
PTPN13-205ENST00000502971 SRPXP78539 464 aa18.42■□□□□ 0.54
PTPN13-205ENST00000502971 SP6Q3SY56 376 aa18.42■□□□□ 0.54
PTPN13-205ENST00000502971 LRRC37A5PQ49AS3 106 aa18.42■□□□□ 0.54
PTPN13-205ENST00000502971 LGI3Q8N145 548 aa18.42■□□□□ 0.54
PTPN13-205ENST00000502971 PRR18Q8N4B5 295 aa18.42■□□□□ 0.54
PTPN13-205ENST00000502971 OR10V1Q8NGI7 309 aa18.42■□□□□ 0.54
PTPN13-205ENST00000502971 LINC01560Q8TB33 94 aa18.42■□□□□ 0.54
PTPN13-205ENST00000502971 GALMQ96C23 342 aa18.42■□□□□ 0.54
PTPN13-205ENST00000502971 LURAP1Q96LR2 239 aa18.42■□□□□ 0.54
PTPN13-205ENST00000502971 MFFQ9GZY8 342 aa18.42■□□□□ 0.54
PTPN13-205ENST00000502971 KCNJ16Q9NPI9 418 aa18.42■□□□□ 0.54
PTPN13-205ENST00000502971 CCL28Q9NRJ3 127 aa18.42■□□□□ 0.54
PTPN13-205ENST00000502971 NBASA2RRP1 2371 aa18.42■□□□□ 0.54
PTPN13-205ENST00000502971 IGHV3OR15-7A0A075B7D8 119 aa18.41■□□□□ 0.54
PTPN13-205ENST00000502971 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP18.41■□□□□ 0.54
PTPN13-205ENST00000502971 E7EQL1 145 aa18.41■□□□□ 0.54
PTPN13-205ENST00000502971 PHF1O43189 567 aaPredicted RBP18.41■□□□□ 0.54
PTPN13-205ENST00000502971 HSPA12AO43301 675 aa18.41■□□□□ 0.54
PTPN13-205ENST00000502971 IRF2P14316 349 aa18.41■□□□□ 0.54
PTPN13-205ENST00000502971 S100A11P31949 105 aa18.41■□□□□ 0.54
PTPN13-205ENST00000502971 FAM209AQ5JX71 171 aa18.41■□□□□ 0.54
PTPN13-205ENST00000502971 TMUB2Q71RG4 321 aa18.41■□□□□ 0.54
PTPN13-205ENST00000502971 TBC1D26Q86UD7 250 aa18.41■□□□□ 0.54
PTPN13-205ENST00000502971 GLYATL2Q8WU03 294 aa18.41■□□□□ 0.54
PTPN13-205ENST00000502971 MSI2Q96DH6 328 aaKnown RBP18.41■□□□□ 0.54
PTPN13-205ENST00000502971 OR10C1Q96KK4 312 aa18.41■□□□□ 0.54
PTPN13-205ENST00000502971 FBXO9Q9UK97 447 aaPredicted RBP18.41■□□□□ 0.54
PTPN13-205ENST00000502971 PPP1R3CQ9UQK1 317 aa18.41■□□□□ 0.54
PTPN13-205ENST00000502971 PCNX1Q96RV3 2341 aa18.41■□□□□ 0.54
PTPN13-205ENST00000502971 MPTX1A8MV57 137 aa18.4■□□□□ 0.54
PTPN13-205ENST00000502971 C12orf77C9JDV5 145 aa18.4■□□□□ 0.54
PTPN13-205ENST00000502971 HSD17B6O14756 317 aa18.4■□□□□ 0.54
PTPN13-205ENST00000502971 MGST3O14880 152 aa18.4■□□□□ 0.54
PTPN13-205ENST00000502971 LUMP51884 338 aaPredicted RBP18.4■□□□□ 0.54
PTPN13-205ENST00000502971 TEX261Q6UWH6 196 aa18.4■□□□□ 0.54
PTPN13-205ENST00000502971 BVESQ8NE79 360 aa18.4■□□□□ 0.54
PTPN13-205ENST00000502971 OR8H1Q8NGG4 311 aa18.4■□□□□ 0.54
PTPN13-205ENST00000502971 ANGPTL6Q8NI99 470 aa18.4■□□□□ 0.54
PTPN13-205ENST00000502971 C18orf12Q96KH6 178 aa18.4■□□□□ 0.54
PTPN13-205ENST00000502971 EGLN1Q9GZT9 426 aa18.4■□□□□ 0.54
PTPN13-205ENST00000502971 DNTTIP1Q9H147 329 aa18.4■□□□□ 0.54
PTPN13-205ENST00000502971 TNFSF18Q9UNG2 199 aa18.4■□□□□ 0.54
PTPN13-205ENST00000502971 U3KQ87 197 aa18.4■□□□□ 0.54
PTPN13-205ENST00000502971 APOBEC3AP31941 199 aaPredicted RBP18.4■□□□□ 0.54
PTPN13-205ENST00000502971 CD80P33681 288 aa18.4■□□□□ 0.54
PTPN13-205ENST00000502971 GLIPR1P48060 266 aa18.4■□□□□ 0.54
PTPN13-205ENST00000502971 IL15RAQ13261 267 aa18.4■□□□□ 0.54
PTPN13-205ENST00000502971 BEX5Q5H9J7 111 aa18.4■□□□□ 0.54
PTPN13-205ENST00000502971 GGNBP1Q5YKI7 109 aa18.4■□□□□ 0.54
PTPN13-205ENST00000502971 CFAP46Q8IYW2 2715 aa18.39■□□□□ 0.53
PTPN13-205ENST00000502971 A0A0D9SG52 128 aa18.39■□□□□ 0.53
PTPN13-205ENST00000502971 K7N7A8 449 aa18.39■□□□□ 0.53
PTPN13-205ENST00000502971 ATP6V1G1O75348 118 aa18.39■□□□□ 0.53
PTPN13-205ENST00000502971 IL2RGP31785 369 aa18.39■□□□□ 0.53
PTPN13-205ENST00000502971 CEACAM6P40199 344 aa18.39■□□□□ 0.53
PTPN13-205ENST00000502971 SNTB1Q13884 538 aaKnown RBP18.39■□□□□ 0.53
PTPN13-205ENST00000502971 EFNB3Q15768 340 aa18.39■□□□□ 0.53
PTPN13-205ENST00000502971 ZNF843Q8N446 348 aa18.39■□□□□ 0.53
PTPN13-205ENST00000502971 ZNF561Q8N587 486 aa18.39■□□□□ 0.53
PTPN13-205ENST00000502971 AKR1E2Q96JD6 320 aa18.39■□□□□ 0.53
PTPN13-205ENST00000502971 TP53RKQ96S44 253 aa18.39■□□□□ 0.53
PTPN13-205ENST00000502971 TOLLIPQ9H0E2 274 aa18.39■□□□□ 0.53
PTPN13-205ENST00000502971 TMEM222Q9H0R3 208 aa18.39■□□□□ 0.53
PTPN13-205ENST00000502971 LRRC30A6NM36 301 aa18.38■□□□□ 0.53
PTPN13-205ENST00000502971 CYB5R3P00387 301 aaPredicted RBP18.38■□□□□ 0.53
PTPN13-205ENST00000502971 HBZP02008 142 aa18.38■□□□□ 0.53
PTPN13-205ENST00000502971 GRNP28799 593 aaKnown RBP18.38■□□□□ 0.53
PTPN13-205ENST00000502971 CCL8P80075 99 aa18.38■□□□□ 0.53
PTPN13-205ENST00000502971 ZNF345Q14585 488 aa18.38■□□□□ 0.53
PTPN13-205ENST00000502971 IAH1Q2TAA2 248 aaPredicted RBP18.38■□□□□ 0.53
PTPN13-205ENST00000502971 C4orf17Q53FE4 359 aa18.38■□□□□ 0.53
PTPN13-205ENST00000502971 OR5D13Q8NGL4 314 aa18.38■□□□□ 0.53
PTPN13-205ENST00000502971 OR1L1Q8NH94 360 aa18.38■□□□□ 0.53
PTPN13-205ENST00000502971 MRGPRDQ8TDS7 321 aa18.38■□□□□ 0.53
PTPN13-205ENST00000502971 SDSLQ96GA7 329 aa18.38■□□□□ 0.53
PTPN13-205ENST00000502971 NCOR1P1Q9H4R4 102 aa18.38■□□□□ 0.53
PTPN13-205ENST00000502971 RNF115Q9Y4L5 304 aa18.38■□□□□ 0.53
PTPN13-205ENST00000502971 TUBAL3A6NHL2 446 aa18.37■□□□□ 0.53
PTPN13-205ENST00000502971 PGLYRP1O75594 196 aaPredicted RBP18.37■□□□□ 0.53
PTPN13-205ENST00000502971 B3GALNT1O75752 331 aa18.37■□□□□ 0.53
PTPN13-205ENST00000502971 OR2F2O95006 317 aa18.37■□□□□ 0.53
PTPN13-205ENST00000502971 WNT2P09544 360 aa18.37■□□□□ 0.53
PTPN13-205ENST00000502971 MUC1P15941 1255 aaPredicted RBP18.37■□□□□ 0.53
PTPN13-205ENST00000502971 OR2F1Q13607 317 aa18.37■□□□□ 0.53
PTPN13-205ENST00000502971 CDSNQ15517 529 aa18.37■□□□□ 0.53
PTPN13-205ENST00000502971 TEX36Q5VZQ5 186 aa18.37■□□□□ 0.53
PTPN13-205ENST00000502971 STUMQ69YW2 141 aa18.37■□□□□ 0.53
PTPN13-205ENST00000502971 ARL6Q9H0F7 186 aa18.37■□□□□ 0.53
PTPN13-205ENST00000502971 MBD2Q9UBB5 411 aa18.37■□□□□ 0.53
PTPN13-205ENST00000502971 UBE2J1Q9Y385 318 aaPredicted RBP18.37■□□□□ 0.53
PTPN13-205ENST00000502971 B9A039 149 aa18.37■□□□□ 0.53
PTPN13-205ENST00000502971 PET100P0DJ07 73 aa18.37■□□□□ 0.53
PTPN13-205ENST00000502971 LYL1P12980 280 aa18.37■□□□□ 0.53
PTPN13-205ENST00000502971 CR1LQ2VPA4 569 aa18.37■□□□□ 0.53
PTPN13-205ENST00000502971 ACOT7LQ6ZUV0 252 aa18.37■□□□□ 0.53
PTPN13-205ENST00000502971 ZNF680Q8NEM1 530 aa18.37■□□□□ 0.53
PTPN13-205ENST00000502971 OR13A1Q8NGR1 328 aa18.37■□□□□ 0.53
PTPN13-205ENST00000502971 UBALD1Q8TB05 177 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms