RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 NCBP2LA6PVI3 153 aaKnown RBP4.76□□□□□ -1.65
LSM3P4-201ENST00000502948 SEC14L6B5MCN3 397 aa4.76□□□□□ -1.65
LSM3P4-201ENST00000502948 SDCBPO00560 298 aaPredicted RBP4.76□□□□□ -1.65
LSM3P4-201ENST00000502948 OGG1O15527 345 aa4.76□□□□□ -1.65
LSM3P4-201ENST00000502948 OR7C1O76099 320 aaPredicted RBP4.76□□□□□ -1.65
LSM3P4-201ENST00000502948 CSTBP04080 98 aaKnown RBP4.76□□□□□ -1.65
LSM3P4-201ENST00000502948 GTF2F2P13984 249 aa4.76□□□□□ -1.65
LSM3P4-201ENST00000502948 IGFBP3P17936 291 aaPredicted RBP4.76□□□□□ -1.65
LSM3P4-201ENST00000502948 FSTP19883 344 aa4.76□□□□□ -1.65
LSM3P4-201ENST00000502948 DCKP27707 260 aa4.76□□□□□ -1.65
LSM3P4-201ENST00000502948 LUMP51884 338 aaPredicted RBP4.76□□□□□ -1.65
LSM3P4-201ENST00000502948 HTD2P86397 168 aa4.76□□□□□ -1.65
LSM3P4-201ENST00000502948 HNF4GQ14541 408 aa4.76□□□□□ -1.65
LSM3P4-201ENST00000502948 PIGYQ3MUY2 71 aa4.76□□□□□ -1.65
LSM3P4-201ENST00000502948 ZFP1Q6P2D0 407 aa4.76□□□□□ -1.65
LSM3P4-201ENST00000502948 LCNL1Q6ZST4 164 aa4.76□□□□□ -1.65
LSM3P4-201ENST00000502948 MOB3BQ86TA1 216 aa4.76□□□□□ -1.65
LSM3P4-201ENST00000502948 LHFPL3Q86UP9 236 aa4.76□□□□□ -1.65
LSM3P4-201ENST00000502948 STX19Q8N4C7 294 aa4.76□□□□□ -1.65
LSM3P4-201ENST00000502948 TCTEX1D1Q8N7M0 179 aa4.76□□□□□ -1.65
LSM3P4-201ENST00000502948 ZNF491Q8N8L2 437 aa4.76□□□□□ -1.65
LSM3P4-201ENST00000502948 MINDY2Q8NBR6 621 aa4.76□□□□□ -1.65
LSM3P4-201ENST00000502948 NPBQ8NG41 125 aa4.76□□□□□ -1.65
LSM3P4-201ENST00000502948 OR11H1Q8NG94 326 aa4.76□□□□□ -1.65
LSM3P4-201ENST00000502948 RFESDQ8TAC1 157 aa4.76□□□□□ -1.65
LSM3P4-201ENST00000502948 TSEN15Q8WW01 171 aaKnown RBP4.76□□□□□ -1.65
LSM3P4-201ENST00000502948 RGP1Q92546 391 aaPredicted RBP4.76□□□□□ -1.65
LSM3P4-201ENST00000502948 TFAP2CQ92754 450 aa4.76□□□□□ -1.65
LSM3P4-201ENST00000502948 ARL11Q969Q4 196 aa4.76□□□□□ -1.65
LSM3P4-201ENST00000502948 TMEM106AQ96A25 262 aa4.76□□□□□ -1.65
LSM3P4-201ENST00000502948 SMIM19Q96E16 107 aa4.76□□□□□ -1.65
LSM3P4-201ENST00000502948 RDH12Q96NR8 316 aa4.76□□□□□ -1.65
LSM3P4-201ENST00000502948 GPER1Q99527 375 aa4.76□□□□□ -1.65
LSM3P4-201ENST00000502948 S100A13Q99584 98 aa4.76□□□□□ -1.65
LSM3P4-201ENST00000502948 PDCD1LG2Q9BQ51 273 aa4.76□□□□□ -1.65
LSM3P4-201ENST00000502948 ISG20L2Q9H9L3 353 aaKnown RBP4.76□□□□□ -1.65
LSM3P4-201ENST00000502948 FGF20Q9NP95 211 aaPredicted RBP4.76□□□□□ -1.65
LSM3P4-201ENST00000502948 RPL36Q9Y3U8 105 aaKnown RBP4.76□□□□□ -1.65
LSM3P4-201ENST00000502948 SMAD5-AS1Q9Y6J3 95 aa4.76□□□□□ -1.65
LSM3P4-201ENST00000502948 TRBV5-5A0A0J9YX44 114 aa4.75□□□□□ -1.65
LSM3P4-201ENST00000502948 C12orf77C9JDV5 145 aa4.75□□□□□ -1.65
LSM3P4-201ENST00000502948 MCRIP1C9JLW8 97 aa4.75□□□□□ -1.65
LSM3P4-201ENST00000502948 E9PI62 339 aa4.75□□□□□ -1.65
LSM3P4-201ENST00000502948 AIPO00170 330 aa4.75□□□□□ -1.65
LSM3P4-201ENST00000502948 HSPB6O14558 160 aa4.75□□□□□ -1.65
LSM3P4-201ENST00000502948 EI24O14681 340 aa4.75□□□□□ -1.65
LSM3P4-201ENST00000502948 ITGB1BP1O14713 200 aa4.75□□□□□ -1.65
LSM3P4-201ENST00000502948 GEMIN2O14893 280 aaKnown RBP4.75□□□□□ -1.65
LSM3P4-201ENST00000502948 SPINT2O43291 252 aa4.75□□□□□ -1.65
LSM3P4-201ENST00000502948 YPEL1O60688 119 aa4.75□□□□□ -1.65
LSM3P4-201ENST00000502948 NDUFA3O95167 84 aa4.75□□□□□ -1.65
LSM3P4-201ENST00000502948 HTR3BO95264 441 aa4.75□□□□□ -1.65
LSM3P4-201ENST00000502948 CD1AP06126 327 aa4.75□□□□□ -1.65
LSM3P4-201ENST00000502948 LIMS3P0CW19 117 aa4.75□□□□□ -1.65
LSM3P4-201ENST00000502948 LIMS4P0CW20 117 aa4.75□□□□□ -1.65
LSM3P4-201ENST00000502948 BDKRB2P30411 391 aa4.75□□□□□ -1.65
LSM3P4-201ENST00000502948 GNG10P50151 68 aa4.75□□□□□ -1.65
LSM3P4-201ENST00000502948 ZNF134P52741 427 aa4.75□□□□□ -1.65
LSM3P4-201ENST00000502948 F2RL1P55085 397 aa4.75□□□□□ -1.65
LSM3P4-201ENST00000502948 PPP3R1P63098 170 aa4.75□□□□□ -1.65
LSM3P4-201ENST00000502948 ZNF616Q08AN1 781 aa4.75□□□□□ -1.65
LSM3P4-201ENST00000502948 LSAMPQ13449 338 aa4.75□□□□□ -1.65
LSM3P4-201ENST00000502948 RIPK1Q13546 671 aa4.75□□□□□ -1.65
LSM3P4-201ENST00000502948 ZSCAN26Q16670 478 aa4.75□□□□□ -1.65
LSM3P4-201ENST00000502948 MORN2Q502X0 79 aa4.75□□□□□ -1.65
LSM3P4-201ENST00000502948 YIF1BQ5BJH7 314 aa4.75□□□□□ -1.65
LSM3P4-201ENST00000502948 C19orf54Q5BKX5 351 aa4.75□□□□□ -1.65
LSM3P4-201ENST00000502948 CT45A1Q5HYN5 189 aa4.75□□□□□ -1.65
LSM3P4-201ENST00000502948 CASC10Q5T4H9 136 aa4.75□□□□□ -1.65
LSM3P4-201ENST00000502948 FAM27D1Q5T7N8 215 aa4.75□□□□□ -1.65
LSM3P4-201ENST00000502948 DDI2Q5TDH0 399 aa4.75□□□□□ -1.65
LSM3P4-201ENST00000502948 PYHIN1Q6K0P9 492 aa4.75□□□□□ -1.65
LSM3P4-201ENST00000502948 LYPD6Q86Y78 171 aa4.75□□□□□ -1.65
LSM3P4-201ENST00000502948 OR52I1Q8NGK6 324 aa4.75□□□□□ -1.65
LSM3P4-201ENST00000502948 CT45A3Q8NHU0 189 aa4.75□□□□□ -1.65
LSM3P4-201ENST00000502948 MUC7Q8TAX7 377 aa4.75□□□□□ -1.65
LSM3P4-201ENST00000502948 THRSPQ92748 146 aa4.75□□□□□ -1.65
LSM3P4-201ENST00000502948 LEAP2Q969E1 77 aa4.75□□□□□ -1.65
LSM3P4-201ENST00000502948 KCTD7Q96MP8 289 aa4.75□□□□□ -1.65
LSM3P4-201ENST00000502948 YPEL2Q96QA6 119 aa4.75□□□□□ -1.65
LSM3P4-201ENST00000502948 NR1H4Q96RI1 486 aaPredicted RBP4.75□□□□□ -1.65
LSM3P4-201ENST00000502948 RNF5Q99942 180 aa4.75□□□□□ -1.65
LSM3P4-201ENST00000502948 HSPB9Q9BQS6 159 aa4.75□□□□□ -1.65
LSM3P4-201ENST00000502948 CST11Q9H112 138 aa4.75□□□□□ -1.65
LSM3P4-201ENST00000502948 TPSG1Q9NRR2 321 aa4.75□□□□□ -1.65
LSM3P4-201ENST00000502948 GHRLQ9UBU3 117 aa4.75□□□□□ -1.65
LSM3P4-201ENST00000502948 ZNF107Q9UII5 783 aaPredicted RBP4.75□□□□□ -1.65
LSM3P4-201ENST00000502948 LINC00527Q9UJ94 153 aa4.75□□□□□ -1.65
LSM3P4-201ENST00000502948 JPT1Q9UK76 154 aa4.75□□□□□ -1.65
LSM3P4-201ENST00000502948 VSIG4Q9Y279 399 aa4.75□□□□□ -1.65
LSM3P4-201ENST00000502948 ERGIC3Q9Y282 383 aa4.75□□□□□ -1.65
LSM3P4-201ENST00000502948 MRPS28Q9Y2Q9 187 aaKnown RBP4.75□□□□□ -1.65
LSM3P4-201ENST00000502948 LOC100130705A0A1B0GUX0 176 aa4.74□□□□□ -1.65
LSM3P4-201ENST00000502948 A0A1W2PPE3 182 aa4.74□□□□□ -1.65
LSM3P4-201ENST00000502948 H3BNX3 289 aa4.74□□□□□ -1.65
LSM3P4-201ENST00000502948 RGS11O94810 467 aa4.74□□□□□ -1.65
LSM3P4-201ENST00000502948 CDRT1O95170 752 aa4.74□□□□□ -1.65
LSM3P4-201ENST00000502948 BRI3O95415 125 aa4.74□□□□□ -1.65
LSM3P4-201ENST00000502948 IGHV3-7P01780 117 aa4.74□□□□□ -1.65
LSM3P4-201ENST00000502948 ECI1P42126 302 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms