RNA–Protein interactions for RNA: ENST00000502850.5

NUP54-202, Transcript of nucleoporin 54, humanhuman

TSL 1 (best)

Gene NUP54, Length 1,604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-202ENST00000502850 RNASEK-C17orf49H0YIS7 233 aa10.17□□□□□ -0.78
NUP54-202ENST00000502850 DNASE2O00115 360 aaPredicted RBP10.17□□□□□ -0.78
NUP54-202ENST00000502850 SLC33A1O00400 549 aaPredicted RBP10.17□□□□□ -0.78
NUP54-202ENST00000502850 ADAM20O43506 726 aa10.17□□□□□ -0.78
NUP54-202ENST00000502850 PGLYRP1O75594 196 aaPredicted RBP10.17□□□□□ -0.78
NUP54-202ENST00000502850 LYZL6O75951 148 aa10.17□□□□□ -0.78
NUP54-202ENST00000502850 TSPAN15O95858 294 aa10.17□□□□□ -0.78
NUP54-202ENST00000502850 SERPINE2P07093 398 aa10.17□□□□□ -0.78
NUP54-202ENST00000502850 IGKV1-13P0DP09 117 aa10.17□□□□□ -0.78
NUP54-202ENST00000502850 GLI4P10075 376 aa10.17□□□□□ -0.78
NUP54-202ENST00000502850 CAMLGP49069 296 aa10.17□□□□□ -0.78
NUP54-202ENST00000502850 EIF2S3LQ2VIR3 472 aaKnown RBP10.17□□□□□ -0.78
NUP54-202ENST00000502850 CNEP1R1Q8N9A8 125 aa10.17□□□□□ -0.78
NUP54-202ENST00000502850 OR8G5Q8NG78 346 aa10.17□□□□□ -0.78
NUP54-202ENST00000502850 BCL2L14Q9BZR8 327 aa10.17□□□□□ -0.78
NUP54-202ENST00000502850 C11orf1Q9H5F2 150 aa10.17□□□□□ -0.78
NUP54-202ENST00000502850 PURGQ9UJV8 347 aaKnown RBP10.17□□□□□ -0.78
NUP54-202ENST00000502850 TRAPPC2LQ9UL33 140 aa10.17□□□□□ -0.78
NUP54-202ENST00000502850 WIPI2Q9Y4P8 454 aa10.17□□□□□ -0.78
NUP54-202ENST00000502850 KPTNQ9Y664 436 aa10.17□□□□□ -0.78
NUP54-202ENST00000502850 SHANK1Q9Y566 2161 aa10.16□□□□□ -0.78
NUP54-202ENST00000502850 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.16□□□□□ -0.78
NUP54-202ENST00000502850 RHBDL1O75783 438 aa10.16□□□□□ -0.78
NUP54-202ENST00000502850 OR2H2O95918 312 aa10.16□□□□□ -0.78
NUP54-202ENST00000502850 CD5P06127 495 aa10.16□□□□□ -0.78
NUP54-202ENST00000502850 CELA3BP08861 270 aa10.16□□□□□ -0.78
NUP54-202ENST00000502850 MUC1P15941 1255 aaPredicted RBP10.16□□□□□ -0.78
NUP54-202ENST00000502850 ZNF154Q13106 437 aa10.16□□□□□ -0.78
NUP54-202ENST00000502850 PEA15Q15121 130 aa10.16□□□□□ -0.78
NUP54-202ENST00000502850 ATRAIDQ6UW56 229 aa10.16□□□□□ -0.78
NUP54-202ENST00000502850 GCNT2Q8N0V5 402 aa10.16□□□□□ -0.78
NUP54-202ENST00000502850 ZBTB34Q8NCN2 500 aa10.16□□□□□ -0.78
NUP54-202ENST00000502850 LSM10Q969L4 123 aaKnown RBP10.16□□□□□ -0.78
NUP54-202ENST00000502850 PBDC1Q9BVG4 233 aa10.16□□□□□ -0.78
NUP54-202ENST00000502850 CXXC4Q9H2H0 198 aa10.16□□□□□ -0.78
NUP54-202ENST00000502850 MBNL3Q9NUK0 354 aaKnown RBP10.16□□□□□ -0.78
NUP54-202ENST00000502850 KCNIP1Q9NZI2 227 aa10.16□□□□□ -0.78
NUP54-202ENST00000502850 ZFYVE26Q68DK2 2539 aa10.16□□□□□ -0.78
NUP54-202ENST00000502850 TMEM30CPA0ZSE6 113 aa10.15□□□□□ -0.78
NUP54-202ENST00000502850 SIRPB1O00241 398 aa10.15□□□□□ -0.78
NUP54-202ENST00000502850 SSSCA1O60232 199 aa10.15□□□□□ -0.78
NUP54-202ENST00000502850 CEACAM4O75871 244 aa10.15□□□□□ -0.78
NUP54-202ENST00000502850 PRH1P02810 166 aa10.15□□□□□ -0.78
NUP54-202ENST00000502850 ADCYAP1P18509 176 aa10.15□□□□□ -0.78
NUP54-202ENST00000502850 KITLGP21583 273 aa10.15□□□□□ -0.78
NUP54-202ENST00000502850 ID3Q02535 119 aa10.15□□□□□ -0.78
NUP54-202ENST00000502850 PSG7Q13046 419 aa10.15□□□□□ -0.78
NUP54-202ENST00000502850 P2RY6Q15077 328 aa10.15□□□□□ -0.78
NUP54-202ENST00000502850 ACSF3Q4G176 576 aaPredicted RBP10.15□□□□□ -0.78
NUP54-202ENST00000502850 WDR86Q86TI4 376 aa10.15□□□□□ -0.78
NUP54-202ENST00000502850 STX12Q86Y82 276 aa10.15□□□□□ -0.78
NUP54-202ENST00000502850 PUSL1Q8N0Z8 303 aaKnown RBP10.15□□□□□ -0.78
NUP54-202ENST00000502850 ZADH2Q8N4Q0 377 aa10.15□□□□□ -0.78
NUP54-202ENST00000502850 FAM169BQ8N8A8 192 aa10.15□□□□□ -0.78
NUP54-202ENST00000502850 RNASE11Q8TAA1 199 aaKnown RBP10.15□□□□□ -0.78
NUP54-202ENST00000502850 KLF14Q8TD94 323 aaPredicted RBP10.15□□□□□ -0.78
NUP54-202ENST00000502850 GNPNAT1Q96EK6 184 aaPredicted RBP10.15□□□□□ -0.78
NUP54-202ENST00000502850 RAB40CQ96S21 281 aa10.15□□□□□ -0.78
NUP54-202ENST00000502850 SMDT1Q9H4I9 107 aa10.15□□□□□ -0.78
NUP54-202ENST00000502850 HES4Q9HCC6 221 aa10.15□□□□□ -0.78
NUP54-202ENST00000502850 NDRG3Q9UGV2 375 aa10.15□□□□□ -0.78
NUP54-202ENST00000502850 ERRFI1Q9UJM3 462 aaPredicted RBP10.15□□□□□ -0.78
NUP54-202ENST00000502850 ZDHHC8Q9ULC8 765 aa10.15□□□□□ -0.78
NUP54-202ENST00000502850 ESPL1Q14674 2120 aa10.15□□□□□ -0.78
NUP54-202ENST00000502850 BTBD17A6NE02 478 aa10.15□□□□□ -0.79
NUP54-202ENST00000502850 ZNHIT1O43257 154 aa10.15□□□□□ -0.79
NUP54-202ENST00000502850 DFFBO76075 338 aa10.15□□□□□ -0.79
NUP54-202ENST00000502850 HAND1O96004 215 aa10.15□□□□□ -0.79
NUP54-202ENST00000502850 SFTA3P0C7M3 94 aa10.15□□□□□ -0.79
NUP54-202ENST00000502850 KIR2DL2P43627 348 aaPredicted RBP10.15□□□□□ -0.79
NUP54-202ENST00000502850 AKR1C2P52895 323 aa10.15□□□□□ -0.79
NUP54-202ENST00000502850 POLR2GP62487 172 aaKnown RBP eCLIP10.15□□□□□ -0.79
NUP54-202ENST00000502850 RPL23AP62750 156 aaKnown RBP10.15□□□□□ -0.79
NUP54-202ENST00000502850 AKR1C1Q04828 323 aa10.15□□□□□ -0.79
NUP54-202ENST00000502850 ZNF616Q08AN1 781 aa10.15□□□□□ -0.79
NUP54-202ENST00000502850 MSMO1Q15800 293 aa10.15□□□□□ -0.79
NUP54-202ENST00000502850 ZNF718Q3SXZ3 478 aa10.15□□□□□ -0.79
NUP54-202ENST00000502850 C20orf204Q6ZNR8 217 aa10.15□□□□□ -0.79
NUP54-202ENST00000502850 IL1F10Q8WWZ1 152 aa10.15□□□□□ -0.79
NUP54-202ENST00000502850 PLSCR4Q9NRQ2 329 aa10.15□□□□□ -0.79
NUP54-202ENST00000502850 C19orf12Q9NSK7 152 aa10.15□□□□□ -0.79
NUP54-202ENST00000502850 CACFD1Q9UGQ2 172 aa10.15□□□□□ -0.79
NUP54-202ENST00000502850 PROCRQ9UNN8 238 aa10.15□□□□□ -0.79
NUP54-202ENST00000502850 RBM7Q9Y580 266 aaKnown RBP10.15□□□□□ -0.79
NUP54-202ENST00000502850 TOR1AO14656 332 aa10.14□□□□□ -0.79
NUP54-202ENST00000502850 CDIPTO14735 213 aa10.14□□□□□ -0.79
NUP54-202ENST00000502850 LMO1P25800 156 aa10.14□□□□□ -0.79
NUP54-202ENST00000502850 GCH1P30793 250 aa10.14□□□□□ -0.79
NUP54-202ENST00000502850 MIDNQ504T8 468 aa10.14□□□□□ -0.79
NUP54-202ENST00000502850 DHRS7BQ6IAN0 325 aaPredicted RBP10.14□□□□□ -0.79
NUP54-202ENST00000502850 SLC35E4Q6ICL7 350 aa10.14□□□□□ -0.79
NUP54-202ENST00000502850 FAM122CQ6P4D5 195 aa10.14□□□□□ -0.79
NUP54-202ENST00000502850 TRAT1Q6PIZ9 186 aa10.14□□□□□ -0.79
NUP54-202ENST00000502850 DPPA3Q6W0C5 159 aa10.14□□□□□ -0.79
NUP54-202ENST00000502850 MYPOPQ86VE0 399 aaPredicted RBP10.14□□□□□ -0.79
NUP54-202ENST00000502850 TMEM252Q8N6L7 170 aa10.14□□□□□ -0.79
NUP54-202ENST00000502850 C9orf106Q8NAJ2 232 aa10.14□□□□□ -0.79
NUP54-202ENST00000502850 PRR7Q8TB68 274 aa10.14□□□□□ -0.79
NUP54-202ENST00000502850 TLNRD1Q9H1K6 362 aa10.14□□□□□ -0.79
NUP54-202ENST00000502850 WFDC1Q9HC57 220 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 149.9 ms