RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 KISS1Q15726 138 aa11.93□□□□□ -0.5
HDAC6-236ENST00000498808 ECSCRQ19T08 205 aa11.93□□□□□ -0.5
HDAC6-236ENST00000498808 FAM220AQ7Z4H9 259 aa11.93□□□□□ -0.5
HDAC6-236ENST00000498808 ARHGAP24Q8N264 748 aa11.93□□□□□ -0.5
HDAC6-236ENST00000498808 SUMF2Q8NBJ7 301 aa11.93□□□□□ -0.5
HDAC6-236ENST00000498808 DNAJC9Q8WXX5 260 aa11.93□□□□□ -0.5
HDAC6-236ENST00000498808 FLYWCH2Q96CP2 140 aaKnown RBP11.93□□□□□ -0.5
HDAC6-236ENST00000498808 THAP7Q9BT49 309 aaPredicted RBP11.93□□□□□ -0.5
HDAC6-236ENST00000498808 TMED9Q9BVK6 235 aa11.93□□□□□ -0.5
HDAC6-236ENST00000498808 DPCDQ9BVM2 203 aaPredicted RBP11.93□□□□□ -0.5
HDAC6-236ENST00000498808 ELOVL1Q9BW60 279 aa11.93□□□□□ -0.5
HDAC6-236ENST00000498808 ANKRD60Q9BZ19 345 aa11.93□□□□□ -0.5
HDAC6-236ENST00000498808 WARS2Q9UGM6 360 aaKnown RBP11.93□□□□□ -0.5
HDAC6-236ENST00000498808 RYR1P21817 5038 aa11.93□□□□□ -0.5
HDAC6-236ENST00000498808 SLC25A17O43808 307 aa11.92□□□□□ -0.5
HDAC6-236ENST00000498808 LY6G6CO95867 125 aa11.92□□□□□ -0.5
HDAC6-236ENST00000498808 DAPP51397 102 aa11.92□□□□□ -0.5
HDAC6-236ENST00000498808 ACTBP60709 375 aa11.92□□□□□ -0.5
HDAC6-236ENST00000498808 Q3ZCU0 254 aa11.92□□□□□ -0.5
HDAC6-236ENST00000498808 ZNF691Q5VV52 312 aa11.92□□□□□ -0.5
HDAC6-236ENST00000498808 C12orf73Q69YU5 71 aa11.92□□□□□ -0.5
HDAC6-236ENST00000498808 FAHD1Q6P587 224 aa11.92□□□□□ -0.5
HDAC6-236ENST00000498808 PXT1Q8NFP0 134 aa11.92□□□□□ -0.5
HDAC6-236ENST00000498808 OR13C3Q8NGS6 347 aa11.92□□□□□ -0.5
HDAC6-236ENST00000498808 OR10K1Q8NGX5 313 aa11.92□□□□□ -0.5
HDAC6-236ENST00000498808 LRGUKQ96M69 825 aa11.92□□□□□ -0.5
HDAC6-236ENST00000498808 FAM107BQ9H098 131 aa11.92□□□□□ -0.5
HDAC6-236ENST00000498808 TUBA4BQ9H853 241 aa11.92□□□□□ -0.5
HDAC6-236ENST00000498808 ARGLU1Q9NWB6 273 aaPredicted RBP11.92□□□□□ -0.5
HDAC6-236ENST00000498808 KIAA1109Q2LD37 5005 aa11.91□□□□□ -0.5
HDAC6-236ENST00000498808 TMEM30CPA0ZSE6 113 aa11.91□□□□□ -0.5
HDAC6-236ENST00000498808 ZAR1LA6NP61 321 aa11.91□□□□□ -0.5
HDAC6-236ENST00000498808 CRIP2P52943 208 aaPredicted RBP11.91□□□□□ -0.5
HDAC6-236ENST00000498808 C5orf64Q2M2E5 130 aa11.91□□□□□ -0.5
HDAC6-236ENST00000498808 CT45A1Q5HYN5 189 aa11.91□□□□□ -0.5
HDAC6-236ENST00000498808 LINC00322Q6ZN03 302 aaPredicted RBP11.91□□□□□ -0.5
HDAC6-236ENST00000498808 CT45A3Q8NHU0 189 aa11.91□□□□□ -0.5
HDAC6-236ENST00000498808 CCDC107Q8WV48 283 aa11.91□□□□□ -0.5
HDAC6-236ENST00000498808 CCDC124Q96CT7 223 aaKnown RBP11.91□□□□□ -0.5
HDAC6-236ENST00000498808 ASB9Q96DX5 294 aa11.91□□□□□ -0.5
HDAC6-236ENST00000498808 NABP2Q9BQ15 211 aa11.91□□□□□ -0.5
HDAC6-236ENST00000498808 FOXA2Q9Y261 457 aaPredicted RBP11.91□□□□□ -0.5
HDAC6-236ENST00000498808 B2RBV5 119 aa11.9□□□□□ -0.5
HDAC6-236ENST00000498808 NBR2O15453 112 aa11.9□□□□□ -0.5
HDAC6-236ENST00000498808 LANCL1O43813 399 aa11.9□□□□□ -0.5
HDAC6-236ENST00000498808 ORC5O43913 435 aa11.9□□□□□ -0.5
HDAC6-236ENST00000498808 MITFO75030 526 aaPredicted RBP11.9□□□□□ -0.5
HDAC6-236ENST00000498808 LRRC36Q1X8D7 754 aa11.9□□□□□ -0.5
HDAC6-236ENST00000498808 RNLSQ5VYX0 342 aa11.9□□□□□ -0.5
HDAC6-236ENST00000498808 LPCAT4Q643R3 524 aa11.9□□□□□ -0.5
HDAC6-236ENST00000498808 LIN54Q6MZP7 749 aa11.9□□□□□ -0.5
HDAC6-236ENST00000498808 FDX2Q6P4F2 183 aa11.9□□□□□ -0.5
HDAC6-236ENST00000498808 SATL1Q86VE3 508 aa11.9□□□□□ -0.5
HDAC6-236ENST00000498808 ZNF251Q9BRH9 671 aa11.9□□□□□ -0.5
HDAC6-236ENST00000498808 HECTD4Q9Y4D8 3996 aa11.9□□□□□ -0.5
HDAC6-236ENST00000498808 CEPT1Q9Y6K0 416 aa11.9□□□□□ -0.5
HDAC6-236ENST00000498808 GABRPO00591 440 aa11.89□□□□□ -0.51
HDAC6-236ENST00000498808 SULT1B1O43704 296 aa11.89□□□□□ -0.51
HDAC6-236ENST00000498808 RGS11O94810 467 aa11.89□□□□□ -0.51
HDAC6-236ENST00000498808 RAB40BQ12829 278 aa11.89□□□□□ -0.51
HDAC6-236ENST00000498808 IL34Q6ZMJ4 242 aa11.89□□□□□ -0.51
HDAC6-236ENST00000498808 OR10V1Q8NGI7 309 aa11.89□□□□□ -0.51
HDAC6-236ENST00000498808 RHOVQ96L33 236 aa11.89□□□□□ -0.51
HDAC6-236ENST00000498808 A3GALT2U3KPV4 340 aa11.89□□□□□ -0.51
HDAC6-236ENST00000498808 OR4C45A6NMZ5 311 aa11.88□□□□□ -0.51
HDAC6-236ENST00000498808 H0Y980 276 aa11.88□□□□□ -0.51
HDAC6-236ENST00000498808 ARPC1BO15143 372 aaKnown RBP11.88□□□□□ -0.51
HDAC6-236ENST00000498808 NDUFA3O95167 84 aa11.88□□□□□ -0.51
HDAC6-236ENST00000498808 BRI3O95415 125 aa11.88□□□□□ -0.51
HDAC6-236ENST00000498808 FAM107AO95990 144 aa11.88□□□□□ -0.51
HDAC6-236ENST00000498808 EGR2P11161 476 aaPredicted RBP11.88□□□□□ -0.51
HDAC6-236ENST00000498808 GTSCR1Q86UQ5 136 aa11.88□□□□□ -0.51
HDAC6-236ENST00000498808 TCTEX1D1Q8N7M0 179 aa11.88□□□□□ -0.51
HDAC6-236ENST00000498808 NPBQ8NG41 125 aa11.88□□□□□ -0.51
HDAC6-236ENST00000498808 TNFAIP8L1Q8WVP5 186 aa11.88□□□□□ -0.51
HDAC6-236ENST00000498808 MS4A10Q96PG2 267 aa11.88□□□□□ -0.51
HDAC6-236ENST00000498808 MRPL20Q9BYC9 149 aaKnown RBP11.88□□□□□ -0.51
HDAC6-236ENST00000498808 CST11Q9H112 138 aa11.88□□□□□ -0.51
HDAC6-236ENST00000498808 IFT22Q9H7X7 185 aa11.88□□□□□ -0.51
HDAC6-236ENST00000498808 GNG12Q9UBI6 72 aa11.88□□□□□ -0.51
HDAC6-236ENST00000498808 ST3GAL6Q9Y274 331 aa11.88□□□□□ -0.51
HDAC6-236ENST00000498808 NUBP2Q9Y5Y2 271 aa11.88□□□□□ -0.51
HDAC6-236ENST00000498808 AQP12BA6NM10 295 aa11.87□□□□□ -0.51
HDAC6-236ENST00000498808 OR7C1O76099 320 aaPredicted RBP11.87□□□□□ -0.51
HDAC6-236ENST00000498808 HTR3BO95264 441 aa11.87□□□□□ -0.51
HDAC6-236ENST00000498808 MT-ND4P03905 459 aa11.87□□□□□ -0.51
HDAC6-236ENST00000498808 HTR1AP08908 422 aa11.87□□□□□ -0.51
HDAC6-236ENST00000498808 ATP6V1E1P36543 226 aa11.87□□□□□ -0.51
HDAC6-236ENST00000498808 CCR9P51686 369 aa11.87□□□□□ -0.51
HDAC6-236ENST00000498808 TPPP2P59282 170 aa11.87□□□□□ -0.51
HDAC6-236ENST00000498808 CX3CL1P78423 397 aa11.87□□□□□ -0.51
HDAC6-236ENST00000498808 ASCL4Q6XD76 172 aa11.87□□□□□ -0.51
HDAC6-236ENST00000498808 AQP12AQ8IXF9 295 aa11.87□□□□□ -0.51
HDAC6-236ENST00000498808 NRBF2Q96F24 287 aa11.87□□□□□ -0.51
HDAC6-236ENST00000498808 PLEKHA3Q9HB20 300 aa11.87□□□□□ -0.51
HDAC6-236ENST00000498808 ERGIC3Q9Y282 383 aa11.87□□□□□ -0.51
HDAC6-236ENST00000498808 SHISA3A0PJX4 238 aa11.86□□□□□ -0.51
HDAC6-236ENST00000498808 IZUMO1RA6ND01 250 aa11.86□□□□□ -0.51
HDAC6-236ENST00000498808 FKBP6O75344 327 aa11.86□□□□□ -0.51
HDAC6-236ENST00000498808 RSU1Q15404 277 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms