RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 IGHV1-8P0DP01 117 aa11.13□□□□□ -0.63
CPNE1-227ENST00000498056 RCVRNP35243 200 aa11.13□□□□□ -0.63
CPNE1-227ENST00000498056 GDNFP39905 211 aa11.13□□□□□ -0.63
CPNE1-227ENST00000498056 ACTBP60709 375 aa11.13□□□□□ -0.63
CPNE1-227ENST00000498056 ACTG1P63261 375 aa11.13□□□□□ -0.63
CPNE1-227ENST00000498056 MRPS10P82664 201 aaKnown RBP11.13□□□□□ -0.63
CPNE1-227ENST00000498056 ZNF79Q15937 498 aa11.13□□□□□ -0.63
CPNE1-227ENST00000498056 OR52W1Q6IF63 320 aa11.13□□□□□ -0.63
CPNE1-227ENST00000498056 HEPN1Q6WQI6 88 aa11.13□□□□□ -0.63
CPNE1-227ENST00000498056 Q8N7P7 452 aa11.13□□□□□ -0.63
CPNE1-227ENST00000498056 BEST4Q8NFU0 473 aa11.13□□□□□ -0.63
CPNE1-227ENST00000498056 GPX8Q8TED1 209 aa11.13□□□□□ -0.63
CPNE1-227ENST00000498056 SMIM4Q8WVI0 70 aa11.13□□□□□ -0.63
CPNE1-227ENST00000498056 FCAMRQ8WWV6 532 aa11.13□□□□□ -0.63
CPNE1-227ENST00000498056 SUCNR1Q9BXA5 334 aa11.13□□□□□ -0.63
CPNE1-227ENST00000498056 METTL8Q9H825 291 aaKnown RBP11.13□□□□□ -0.63
CPNE1-227ENST00000498056 AKIP1Q9NQ31 210 aa11.13□□□□□ -0.63
CPNE1-227ENST00000498056 GNG12Q9UBI6 72 aa11.13□□□□□ -0.63
CPNE1-227ENST00000498056 SESN1Q9Y6P5 492 aa11.13□□□□□ -0.63
CPNE1-227ENST00000498056 C17orf98A8MV24 154 aa11.12□□□□□ -0.63
CPNE1-227ENST00000498056 TRDCB7Z8K6 153 aa11.12□□□□□ -0.63
CPNE1-227ENST00000498056 GABARAPH6UMI1 98 aa11.12□□□□□ -0.63
CPNE1-227ENST00000498056 SULT1C2O00338 296 aa11.12□□□□□ -0.63
CPNE1-227ENST00000498056 BET1O15155 118 aa11.12□□□□□ -0.63
CPNE1-227ENST00000498056 CTDSPLO15194 276 aa11.12□□□□□ -0.63
CPNE1-227ENST00000498056 FABP7O15540 132 aa11.12□□□□□ -0.63
CPNE1-227ENST00000498056 TPPPO94811 219 aa11.12□□□□□ -0.63
CPNE1-227ENST00000498056 SCTP09683 121 aa11.12□□□□□ -0.63
CPNE1-227ENST00000498056 MMP9P14780 707 aa11.12□□□□□ -0.63
CPNE1-227ENST00000498056 HOXB4P17483 251 aaPredicted RBP11.12□□□□□ -0.63
CPNE1-227ENST00000498056 GZMHP20718 246 aa11.12□□□□□ -0.63
CPNE1-227ENST00000498056 FPR2P25090 351 aa11.12□□□□□ -0.63
CPNE1-227ENST00000498056 ETV6P41212 452 aa11.12□□□□□ -0.63
CPNE1-227ENST00000498056 GNG10P50151 68 aa11.12□□□□□ -0.63
CPNE1-227ENST00000498056 PAX8Q06710 450 aa11.12□□□□□ -0.63
CPNE1-227ENST00000498056 GNMTQ14749 295 aa11.12□□□□□ -0.63
CPNE1-227ENST00000498056 CR1LQ2VPA4 569 aa11.12□□□□□ -0.63
CPNE1-227ENST00000498056 CLEC9AQ6UXN8 241 aa11.12□□□□□ -0.63
CPNE1-227ENST00000498056 IL17RELQ6ZVW7 336 aa11.12□□□□□ -0.63
CPNE1-227ENST00000498056 ZNF554Q86TJ5 538 aa11.12□□□□□ -0.63
CPNE1-227ENST00000498056 HOGA1Q86XE5 327 aa11.12□□□□□ -0.63
CPNE1-227ENST00000498056 PDZD9Q8IXQ8 264 aa11.12□□□□□ -0.63
CPNE1-227ENST00000498056 MFSD4AQ8N468 514 aa11.12□□□□□ -0.63
CPNE1-227ENST00000498056 OR10V1Q8NGI7 309 aa11.12□□□□□ -0.63
CPNE1-227ENST00000498056 SNAPC3Q92966 411 aa11.12□□□□□ -0.63
CPNE1-227ENST00000498056 LEAP2Q969E1 77 aa11.12□□□□□ -0.63
CPNE1-227ENST00000498056 LHX4Q969G2 390 aa11.12□□□□□ -0.63
CPNE1-227ENST00000498056 GALMQ96C23 342 aa11.12□□□□□ -0.63
CPNE1-227ENST00000498056 DMRTB1Q96MA1 342 aa11.12□□□□□ -0.63
CPNE1-227ENST00000498056 TBX15Q96SF7 602 aa11.12□□□□□ -0.63
CPNE1-227ENST00000498056 SRRQ9GZT4 340 aa11.12□□□□□ -0.63
CPNE1-227ENST00000498056 SLC23A1Q9UHI7 598 aa11.12□□□□□ -0.63
CPNE1-227ENST00000498056 MAST4O15021 2626 aa11.11□□□□□ -0.63
CPNE1-227ENST00000498056 IGHV3OR16-10A0A075B7F0 116 aa11.11□□□□□ -0.63
CPNE1-227ENST00000498056 POM121CA8CG34 1229 aa11.11□□□□□ -0.63
CPNE1-227ENST00000498056 A8MV72 311 aaPredicted RBP11.11□□□□□ -0.63
CPNE1-227ENST00000498056 NPIPB11E5RHQ5 1161 aa11.11□□□□□ -0.63
CPNE1-227ENST00000498056 HSPA12AO43301 675 aa11.11□□□□□ -0.63
CPNE1-227ENST00000498056 LY6G6DO95868 133 aa11.11□□□□□ -0.63
CPNE1-227ENST00000498056 IGHV3-7P01780 117 aa11.11□□□□□ -0.63
CPNE1-227ENST00000498056 GSTT2P0CG29 244 aa11.11□□□□□ -0.63
CPNE1-227ENST00000498056 GSTT2BP0CG30 244 aa11.11□□□□□ -0.63
CPNE1-227ENST00000498056 CGB3P0DN86 165 aa11.11□□□□□ -0.63
CPNE1-227ENST00000498056 CGB7P0DN87 165 aa11.11□□□□□ -0.63
CPNE1-227ENST00000498056 FOSL1P15407 271 aa11.11□□□□□ -0.63
CPNE1-227ENST00000498056 PTBP1P26599 531 aaKnown RBP eCLIP11.11□□□□□ -0.63
CPNE1-227ENST00000498056 TMEM30BQ3MIR4 351 aa11.11□□□□□ -0.63
CPNE1-227ENST00000498056 CHRFAM7AQ494W8 412 aa11.11□□□□□ -0.63
CPNE1-227ENST00000498056 IGSF11Q5DX21 431 aa11.11□□□□□ -0.63
CPNE1-227ENST00000498056 NCR3LG1Q68D85 454 aa11.11□□□□□ -0.63
CPNE1-227ENST00000498056 Q8N402 240 aa11.11□□□□□ -0.63
CPNE1-227ENST00000498056 OR4A4PQ8NGN8 299 aa11.11□□□□□ -0.63
CPNE1-227ENST00000498056 S100ZQ8WXG8 99 aa11.11□□□□□ -0.63
CPNE1-227ENST00000498056 OCSTAMPQ9BR26 566 aa11.11□□□□□ -0.63
CPNE1-227ENST00000498056 OR2S2Q9NQN1 319 aa11.11□□□□□ -0.63
CPNE1-227ENST00000498056 OR1A1Q9P1Q5 309 aa11.11□□□□□ -0.63
CPNE1-227ENST00000498056 KLK11Q9UBX7 282 aa11.11□□□□□ -0.63
CPNE1-227ENST00000498056 ANXA10Q9UJ72 324 aa11.11□□□□□ -0.63
CPNE1-227ENST00000498056 JPT1Q9UK76 154 aa11.11□□□□□ -0.63
CPNE1-227ENST00000498056 ANAPC10Q9UM13 185 aa11.11□□□□□ -0.63
CPNE1-227ENST00000498056 A0A1W2PRD5 423 aa11.1□□□□□ -0.63
CPNE1-227ENST00000498056 A0A1W2PRF3 423 aa11.1□□□□□ -0.63
CPNE1-227ENST00000498056 A0A1W2PRM7 423 aa11.1□□□□□ -0.63
CPNE1-227ENST00000498056 F2RL2O00254 374 aa11.1□□□□□ -0.63
CPNE1-227ENST00000498056 RBBP9O75884 186 aa11.1□□□□□ -0.63
CPNE1-227ENST00000498056 PRTN3P24158 256 aa11.1□□□□□ -0.63
CPNE1-227ENST00000498056 PPP1CCP36873 323 aaKnown RBP11.1□□□□□ -0.63
CPNE1-227ENST00000498056 INPP1P49441 399 aa11.1□□□□□ -0.63
CPNE1-227ENST00000498056 ZNF45Q02386 682 aa11.1□□□□□ -0.63
CPNE1-227ENST00000498056 HERPUD1Q15011 391 aa11.1□□□□□ -0.63
CPNE1-227ENST00000498056 SRSF7Q16629 238 aaKnown RBP eCLIP11.1□□□□□ -0.63
CPNE1-227ENST00000498056 TRIQKQ629K1 86 aa11.1□□□□□ -0.63
CPNE1-227ENST00000498056 STEAP3Q658P3 488 aa11.1□□□□□ -0.63
CPNE1-227ENST00000498056 FAM53AQ6NSI3 398 aaPredicted RBP11.1□□□□□ -0.63
CPNE1-227ENST00000498056 Q6ZS49 121 aa11.1□□□□□ -0.63
CPNE1-227ENST00000498056 LINC00299Q6ZSB3 139 aa11.1□□□□□ -0.63
CPNE1-227ENST00000498056 Q71RC1 249 aaPredicted RBP11.1□□□□□ -0.63
CPNE1-227ENST00000498056 PNKDQ8N490 385 aa11.1□□□□□ -0.63
CPNE1-227ENST00000498056 C11orf42Q8N5U0 333 aa11.1□□□□□ -0.63
CPNE1-227ENST00000498056 OR52L2PQ8NGH6 319 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms