RNA–Protein interactions for RNA: ENST00000497106.5

USP54-215, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,773 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-215ENST00000497106 UBA52P62987 128 aaKnown RBP7.07□□□□□ -1.28
USP54-215ENST00000497106 OR2F1Q13607 317 aa7.07□□□□□ -1.28
USP54-215ENST00000497106 ZNF497Q6ZNH5 498 aa7.07□□□□□ -1.28
USP54-215ENST00000497106 C20orf204Q6ZNR8 217 aa7.07□□□□□ -1.28
USP54-215ENST00000497106 OR4D10Q8NGI6 311 aa7.07□□□□□ -1.28
USP54-215ENST00000497106 SVIPQ8NHG7 77 aa7.07□□□□□ -1.28
USP54-215ENST00000497106 ARL6Q9H0F7 186 aa7.07□□□□□ -1.28
USP54-215ENST00000497106 PCNX3Q9H6A9 2034 aa7.07□□□□□ -1.28
USP54-215ENST00000497106 CEP250Q9BV73 2442 aa7.07□□□□□ -1.28
USP54-215ENST00000497106 MPPED1O15442 326 aa7.07□□□□□ -1.28
USP54-215ENST00000497106 MLNRO43193 412 aa7.07□□□□□ -1.28
USP54-215ENST00000497106 PRRX1P54821 245 aa7.07□□□□□ -1.28
USP54-215ENST00000497106 ADIPOQQ15848 244 aa7.07□□□□□ -1.28
USP54-215ENST00000497106 SWI5Q1ZZU3 235 aa7.07□□□□□ -1.28
USP54-215ENST00000497106 LRRC37A5PQ49AS3 106 aa7.07□□□□□ -1.28
USP54-215ENST00000497106 OR10A7Q8NGE5 316 aa7.07□□□□□ -1.28
USP54-215ENST00000497106 IL22RA2Q969J5 263 aa7.07□□□□□ -1.28
USP54-215ENST00000497106 TAS2R3Q9NYW6 316 aa7.07□□□□□ -1.28
USP54-215ENST00000497106 TSPAN4O14817 238 aa7.07□□□□□ -1.28
USP54-215ENST00000497106 ST8SIA3O43173 380 aa7.07□□□□□ -1.28
USP54-215ENST00000497106 GPR6P46095 362 aaPredicted RBP7.07□□□□□ -1.28
USP54-215ENST00000497106 GZMKP49863 264 aa7.07□□□□□ -1.28
USP54-215ENST00000497106 AESQ08117 197 aa7.07□□□□□ -1.28
USP54-215ENST00000497106 BAMBIQ13145 260 aa7.07□□□□□ -1.28
USP54-215ENST00000497106 LTC4SQ16873 150 aa7.07□□□□□ -1.28
USP54-215ENST00000497106 ZNF66Q6ZN08 573 aa7.07□□□□□ -1.28
USP54-215ENST00000497106 OR10X1Q8NGY0 326 aa7.07□□□□□ -1.28
USP54-215ENST00000497106 TMEM246Q9BRR3 403 aa7.07□□□□□ -1.28
USP54-215ENST00000497106 NMES1Q9C002 83 aa7.07□□□□□ -1.28
USP54-215ENST00000497106 PLEKHA2Q9HB19 425 aa7.07□□□□□ -1.28
USP54-215ENST00000497106 SLC2A9Q9NRM0 540 aa7.07□□□□□ -1.28
USP54-215ENST00000497106 PIPOXQ9P0Z9 390 aa7.07□□□□□ -1.28
USP54-215ENST00000497106 PCSK5Q92824 1860 aa7.06□□□□□ -1.28
USP54-215ENST00000497106 IGHV3OR15-7A0A075B7D8 119 aa7.06□□□□□ -1.28
USP54-215ENST00000497106 RRASP10301 218 aa7.06□□□□□ -1.28
USP54-215ENST00000497106 PSG2P11465 335 aa7.06□□□□□ -1.28
USP54-215ENST00000497106 PSMB6P28072 239 aa7.06□□□□□ -1.28
USP54-215ENST00000497106 BTCP35070 178 aa7.06□□□□□ -1.28
USP54-215ENST00000497106 ERVK11-1P61568 191 aa7.06□□□□□ -1.28
USP54-215ENST00000497106 LIAT1Q6ZQX7 453 aa7.06□□□□□ -1.28
USP54-215ENST00000497106 ZNF546Q86UE3 836 aa7.06□□□□□ -1.28
USP54-215ENST00000497106 CABLES2Q9BTV7 478 aa7.06□□□□□ -1.28
USP54-215ENST00000497106 LSM5Q9Y4Y9 91 aaKnown RBP7.06□□□□□ -1.28
USP54-215ENST00000497106 RANBP2P49792 3224 aaKnown RBP7.06□□□□□ -1.28
USP54-215ENST00000497106 TRAV24A0A0B4J272 114 aa7.06□□□□□ -1.28
USP54-215ENST00000497106 NAPSAO96009 420 aa7.06□□□□□ -1.28
USP54-215ENST00000497106 CYB5R3P00387 301 aaPredicted RBP7.06□□□□□ -1.28
USP54-215ENST00000497106 HBZP02008 142 aa7.06□□□□□ -1.28
USP54-215ENST00000497106 TMEM268Q5VZI3 342 aa7.06□□□□□ -1.28
USP54-215ENST00000497106 CLEC18BQ6UXF7 455 aa7.06□□□□□ -1.28
USP54-215ENST00000497106 MYPOPQ86VE0 399 aaPredicted RBP7.06□□□□□ -1.28
USP54-215ENST00000497106 FAM219AQ8IW50 185 aa7.06□□□□□ -1.28
USP54-215ENST00000497106 DYRK2Q92630 601 aa7.06□□□□□ -1.28
USP54-215ENST00000497106 ZNF714Q96N38 554 aa7.06□□□□□ -1.28
USP54-215ENST00000497106 UBQLN2Q9UHD9 624 aa7.06□□□□□ -1.28
USP54-215ENST00000497106 TAAR5O14804 337 aa7.06□□□□□ -1.28
USP54-215ENST00000497106 IFNA5P01569 189 aa7.06□□□□□ -1.28
USP54-215ENST00000497106 GYPAP02724 150 aa7.06□□□□□ -1.28
USP54-215ENST00000497106 OR8U9P0C7N5 309 aa7.06□□□□□ -1.28
USP54-215ENST00000497106 LMO1P25800 156 aa7.06□□□□□ -1.28
USP54-215ENST00000497106 HTR2BP41595 481 aa7.06□□□□□ -1.28
USP54-215ENST00000497106 FOXRED2Q8IWF2 684 aa7.06□□□□□ -1.28
USP54-215ENST00000497106 OR8U1Q8NH10 309 aa7.06□□□□□ -1.28
USP54-215ENST00000497106 CCL13Q99616 98 aa7.06□□□□□ -1.28
USP54-215ENST00000497106 IDI2-AS1Q9NZ38 188 aa7.06□□□□□ -1.28
USP54-215ENST00000497106 F5H0A9 414 aaPredicted RBP7.05□□□□□ -1.28
USP54-215ENST00000497106 H0Y980 276 aa7.05□□□□□ -1.28
USP54-215ENST00000497106 ARPC5O15511 151 aa7.05□□□□□ -1.28
USP54-215ENST00000497106 NKX2-1P43699 371 aaPredicted RBP7.05□□□□□ -1.28
USP54-215ENST00000497106 THBS3P49746 956 aa7.05□□□□□ -1.28
USP54-215ENST00000497106 RPL31P62899 125 aaKnown RBP7.05□□□□□ -1.28
USP54-215ENST00000497106 ANKRD39Q53RE8 183 aa7.05□□□□□ -1.28
USP54-215ENST00000497106 Q6P435 159 aa7.05□□□□□ -1.28
USP54-215ENST00000497106 LRP11Q86VZ4 500 aa7.05□□□□□ -1.28
USP54-215ENST00000497106 ZNF645Q8N7E2 425 aa7.05□□□□□ -1.28
USP54-215ENST00000497106 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.05□□□□□ -1.28
USP54-215ENST00000497106 OR51H1Q8NH63 302 aa7.05□□□□□ -1.28
USP54-215ENST00000497106 NEIL1Q96FI4 390 aaPredicted RBP7.05□□□□□ -1.28
USP54-215ENST00000497106 ABHD14BQ96IU4 210 aa7.05□□□□□ -1.28
USP54-215ENST00000497106 CIB3Q96Q77 187 aaPredicted RBP7.05□□□□□ -1.28
USP54-215ENST00000497106 ZNF471Q9BX82 626 aaPredicted RBP7.05□□□□□ -1.28
USP54-215ENST00000497106 OR2D2Q9H210 308 aa7.05□□□□□ -1.28
USP54-215ENST00000497106 HES4Q9HCC6 221 aa7.05□□□□□ -1.28
USP54-215ENST00000497106 CLN8Q9UBY8 286 aa7.05□□□□□ -1.28
USP54-215ENST00000497106 APC2O95996 2303 aa7.05□□□□□ -1.28
USP54-215ENST00000497106 OR5H14A6NHG9 310 aa7.05□□□□□ -1.28
USP54-215ENST00000497106 CRYM-AS1A6NIL9 109 aa7.05□□□□□ -1.28
USP54-215ENST00000497106 NPIPB11E5RHQ5 1161 aa7.05□□□□□ -1.28
USP54-215ENST00000497106 ZG16O60844 167 aa7.05□□□□□ -1.28
USP54-215ENST00000497106 PDLIM4P50479 330 aa7.05□□□□□ -1.28
USP54-215ENST00000497106 MRPS11P82912 194 aaKnown RBP7.05□□□□□ -1.28
USP54-215ENST00000497106 HTD2P86397 168 aa7.05□□□□□ -1.28
USP54-215ENST00000497106 H2BFWTQ7Z2G1 175 aa7.05□□□□□ -1.28
USP54-215ENST00000497106 H1FOOQ8IZA3 346 aaPredicted RBP7.05□□□□□ -1.28
USP54-215ENST00000497106 DMBX1Q8NFW5 382 aa7.05□□□□□ -1.28
USP54-215ENST00000497106 OR52B4Q8NGK2 314 aa7.05□□□□□ -1.28
USP54-215ENST00000497106 OR4A16Q8NH70 328 aa7.05□□□□□ -1.28
USP54-215ENST00000497106 RSRP1Q9BUV0 290 aa7.05□□□□□ -1.28
USP54-215ENST00000497106 CALYQ9NYX4 217 aa7.05□□□□□ -1.28
USP54-215ENST00000497106 E5RGE8 158 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms