RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 EVPLQ92817 2033 aa2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 MROH2BQ7Z745 1585 aa2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 SMIM35A0A1B0GVV1 85 aa2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 hADV38S2A0JD32 116 aa2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 LRRC30A6NM36 301 aa2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 C9JAW5 83 aa2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 KBTBD11O94819 623 aa2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 NDUFA7O95182 113 aa2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 TRGC1P0CF51 173 aa2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 FAM106CPP0CH98 169 aa2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 GADD45AP24522 165 aa2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 G6PCP35575 357 aa2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 NKX2-1P43699 371 aaPredicted RBP2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 ZFP36L2P47974 494 aaKnown RBP2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 NUDT2P50583 147 aa2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 CLDN15P56746 228 aa2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 RPL31P62899 125 aaKnown RBP2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 SLC10A2Q12908 348 aaPredicted RBP2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 KLRB1Q12918 225 aa2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 PSG7Q13046 419 aa2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 PRDX4Q13162 271 aa2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 VGLL4Q14135 290 aa2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 FAM53BQ14153 422 aa2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 GINS1Q14691 196 aa2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 UPP1Q16831 310 aa2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 ST3GAL2Q16842 350 aa2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 FAM106AQ4KMX7 169 aa2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 RAB6CQ53S08 254 aa2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 GLYATL3Q5SZD4 288 aa2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 TEX36Q5VZQ5 186 aa2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 AMMECR1LQ6DCA0 310 aa2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 UNQ6126/PRO20091Q6UXV3 157 aa2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 Q6ZSR6 202 aa2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 H2AFVQ71UI9 128 aa2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 FAM19A1Q7Z5A9 133 aa2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 ZNF429Q86V71 674 aa2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 TMEM86BQ8N661 226 aa2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 TMEM178AQ8NBL3 297 aa2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 ADAD2Q8NCV1 583 aaKnown RBP2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 GPR26Q8NDV2 337 aa2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 OR8G5Q8NG78 346 aa2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 OR2K2Q8NGT1 345 aa2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 RDH5Q92781 318 aa2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 NUS1Q96E22 293 aa2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 TMEM101Q96IK0 257 aa2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 SLC17A9Q9BYT1 436 aa2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 RAB6CQ9H0N0 254 aa2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 DUSP21Q9H596 190 aa2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 ACP6Q9NPH0 428 aa2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 ACOT13Q9NPJ3 140 aa2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 SERTAD4Q9NUC0 356 aa2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 KCNIP1Q9NZI2 227 aa2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 PRNDQ9UKY0 176 aa2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 HIGD1AQ9Y241 93 aa2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 GCC2Q8IWJ2 1684 aa2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 KNDC1Q76NI1 1749 aa2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 LTN1O94822 1766 aa2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 CDC42BPGQ6DT37 1551 aa2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 UGGT1Q9NYU2 1555 aa2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 CEP170BQ9Y4F5 1589 aaPredicted RBP2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 A0A1B0GW64 132 aa2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 C7orf71A4D174 169 aa2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 LMO7DNF2Z398 122 aa2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 GAPDHSO14556 408 aaPredicted RBP2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 TAAR5O14804 337 aa2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 C1RP00736 705 aa2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 SPINK8P0C7L1 97 aa2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 SMIM10L2AP0DMW4 78 aa2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 SMIM10L2BP0DMW5 78 aa2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 LEPP41159 167 aa2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 TNFSF9P41273 254 aa2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 OR1E2P47887 323 aa2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 REG1BP48304 166 aa2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 LHX2P50458 406 aa2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 GZMMP51124 257 aa2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 SGSHP51688 502 aa2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 HSPE1P61604 102 aaKnown RBP2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 TNFAIP6P98066 277 aaPredicted RBP2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 MEF2CQ06413 473 aaPredicted RBP2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 C2orf68Q2NKX9 166 aa2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 SPANXN3Q5MJ09 141 aa2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 TRIM40Q6P9F5 258 aa2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 CNIH2Q6PI25 160 aa2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 APOOLQ6UXV4 268 aa2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 CLEC20AQ6ZU45 233 aa2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 OR4N5Q8IXE1 308 aa2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 TTC9CQ8N5M4 171 aa2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 KLHDC1Q8N7A1 406 aa2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 GATD1Q8NB37 220 aa2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 OR51T1Q8NGJ9 327 aa2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 OR10G7Q8NGN6 311 aa2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 OR4C3Q8NH37 302 aa2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 TMEM37Q8WXS4 190 aa2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 ACY3Q96HD9 319 aa2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 OR4K3Q96R72 315 aa2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 SAMD10Q9BYL1 202 aa2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 SLC25A39Q9BZJ4 359 aaPredicted RBP2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 CHIAQ9BZP6 476 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms