RNA–Protein interactions for RNA: ENST00000496855.1

SNX13-211, Transcript of sorting nexin 13, humanhuman

TSL 1 (best)

Gene SNX13, Length 1,499 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-211ENST00000496855 RAB25P57735 213 aa3.13□□□□□ -1.91
SNX13-211ENST00000496855 EMX1Q04741 257 aaPredicted RBP3.13□□□□□ -1.91
SNX13-211ENST00000496855 JOSD1Q15040 202 aaPredicted RBP3.13□□□□□ -1.91
SNX13-211ENST00000496855 SNRNP35Q16560 246 aaKnown RBP3.13□□□□□ -1.91
SNX13-211ENST00000496855 ACOT6Q3I5F7 207 aaPredicted RBP3.13□□□□□ -1.91
SNX13-211ENST00000496855 YIF1BQ5BJH7 314 aa3.13□□□□□ -1.91
SNX13-211ENST00000496855 HES3Q5TGS1 186 aa3.13□□□□□ -1.91
SNX13-211ENST00000496855 TMED4Q7Z7H5 227 aa3.13□□□□□ -1.91
SNX13-211ENST00000496855 SLC35G3Q8N808 338 aa3.13□□□□□ -1.91
SNX13-211ENST00000496855 YIPF7Q8N8F6 280 aa3.13□□□□□ -1.91
SNX13-211ENST00000496855 OR2K2Q8NGT1 345 aa3.13□□□□□ -1.91
SNX13-211ENST00000496855 TMBIM1Q969X1 311 aa3.13□□□□□ -1.91
SNX13-211ENST00000496855 PHB2Q99623 299 aa3.13□□□□□ -1.91
SNX13-211ENST00000496855 SIGMAR1Q99720 223 aa3.13□□□□□ -1.91
SNX13-211ENST00000496855 MMP26Q9NRE1 261 aa3.13□□□□□ -1.91
SNX13-211ENST00000496855 IDI2-AS1Q9NZ38 188 aa3.13□□□□□ -1.91
SNX13-211ENST00000496855 HHLA2Q9UM44 414 aa3.13□□□□□ -1.91
SNX13-211ENST00000496855 PKIGQ9Y2B9 76 aa3.13□□□□□ -1.91
SNX13-211ENST00000496855 LSM5Q9Y4Y9 91 aaKnown RBP3.13□□□□□ -1.91
SNX13-211ENST00000496855 ZNF532Q9HCE3 1301 aa3.13□□□□□ -1.91
SNX13-211ENST00000496855 NPHP4O75161 1426 aaPredicted RBP3.12□□□□□ -1.91
SNX13-211ENST00000496855 SIGLEC1Q9BZZ2 1709 aa3.12□□□□□ -1.91
SNX13-211ENST00000496855 PIKFYVEQ9Y2I7 2098 aa3.12□□□□□ -1.91
SNX13-211ENST00000496855 CHD2O14647 1828 aaKnown RBP3.12□□□□□ -1.91
SNX13-211ENST00000496855 CEP350Q5VT06 3117 aa3.12□□□□□ -1.91
SNX13-211ENST00000496855 LOC102724200A0A096LPH7 203 aaPredicted RBP3.12□□□□□ -1.91
SNX13-211ENST00000496855 IGHV3-72A0A0B4J1Y9 119 aa3.12□□□□□ -1.91
SNX13-211ENST00000496855 TEX50A0A1B0GTY4 177 aa3.12□□□□□ -1.91
SNX13-211ENST00000496855 INS-IGF2F8WCM5 200 aa3.12□□□□□ -1.91
SNX13-211ENST00000496855 TCF21O43680 179 aa3.12□□□□□ -1.91
SNX13-211ENST00000496855 OR2A4O95047 310 aa3.12□□□□□ -1.91
SNX13-211ENST00000496855 CYB5R3P00387 301 aaPredicted RBP3.12□□□□□ -1.91
SNX13-211ENST00000496855 INSP01308 110 aa3.12□□□□□ -1.91
SNX13-211ENST00000496855 MAP2K4P45985 399 aa3.12□□□□□ -1.91
SNX13-211ENST00000496855 SSX1Q16384 188 aa3.12□□□□□ -1.91
SNX13-211ENST00000496855 HIST2H3PS2Q5TEC6 136 aa3.12□□□□□ -1.91
SNX13-211ENST00000496855 SLC36A1Q7Z2H8 476 aa3.12□□□□□ -1.91
SNX13-211ENST00000496855 ZNF550Q7Z398 422 aa3.12□□□□□ -1.91
SNX13-211ENST00000496855 TMEM144Q7Z5S9 345 aa3.12□□□□□ -1.91
SNX13-211ENST00000496855 LINC00596Q86U02 117 aa3.12□□□□□ -1.91
SNX13-211ENST00000496855 DOLPP1Q86YN1 238 aa3.12□□□□□ -1.91
SNX13-211ENST00000496855 SLC35F6Q8N357 371 aa3.12□□□□□ -1.91
SNX13-211ENST00000496855 C15orf40Q8WUR7 153 aa3.12□□□□□ -1.91
SNX13-211ENST00000496855 PPP1R2P1Q96PQ5 205 aa3.12□□□□□ -1.91
SNX13-211ENST00000496855 OR2V2Q96R30 315 aa3.12□□□□□ -1.91
SNX13-211ENST00000496855 OR2A7Q96R45 310 aa3.12□□□□□ -1.91
SNX13-211ENST00000496855 PCBD2Q9H0N5 130 aa3.12□□□□□ -1.91
SNX13-211ENST00000496855 C19orf12Q9NSK7 152 aa3.12□□□□□ -1.91
SNX13-211ENST00000496855 ARMC1Q9NVT9 282 aa3.12□□□□□ -1.91
SNX13-211ENST00000496855 POMPQ9Y244 141 aa3.12□□□□□ -1.91
SNX13-211ENST00000496855 HDGFL3Q9Y3E1 203 aa3.12□□□□□ -1.91
SNX13-211ENST00000496855 KIF15Q9NS87 1388 aa3.12□□□□□ -1.91
SNX13-211ENST00000496855 FHAD1B1AJZ9 1412 aa3.12□□□□□ -1.91
SNX13-211ENST00000496855 TRAV19A0A0A6YYK7 116 aa3.11□□□□□ -1.91
SNX13-211ENST00000496855 A0A1B0GVX0 72 aa3.11□□□□□ -1.91
SNX13-211ENST00000496855 TMEM250H0YL14 139 aa3.11□□□□□ -1.91
SNX13-211ENST00000496855 M0QYV0 167 aa3.11□□□□□ -1.91
SNX13-211ENST00000496855 SOCS1O15524 211 aa3.11□□□□□ -1.91
SNX13-211ENST00000496855 IGKV1-39P01597 117 aa3.11□□□□□ -1.91
SNX13-211ENST00000496855 IGKV1D-39P04432 117 aa3.11□□□□□ -1.91
SNX13-211ENST00000496855 OR4Q2P0C623 313 aa3.11□□□□□ -1.91
SNX13-211ENST00000496855 TLX1NBP0CAT3 122 aa3.11□□□□□ -1.91
SNX13-211ENST00000496855 CD36P16671 472 aa3.11□□□□□ -1.91
SNX13-211ENST00000496855 ZNF32P17041 273 aa3.11□□□□□ -1.91
SNX13-211ENST00000496855 MP68P56378 58 aa3.11□□□□□ -1.91
SNX13-211ENST00000496855 PRDX4Q13162 271 aa3.11□□□□□ -1.91
SNX13-211ENST00000496855 C1orf194Q5T5A4 169 aa3.11□□□□□ -1.91
SNX13-211ENST00000496855 TRIQKQ629K1 86 aa3.11□□□□□ -1.91
SNX13-211ENST00000496855 LCN8Q6JVE9 175 aa3.11□□□□□ -1.91
SNX13-211ENST00000496855 OLIG3Q7RTU3 272 aa3.11□□□□□ -1.91
SNX13-211ENST00000496855 C6orf120Q7Z4R8 191 aa3.11□□□□□ -1.91
SNX13-211ENST00000496855 CAMK2N1Q7Z7J9 78 aa3.11□□□□□ -1.91
SNX13-211ENST00000496855 MDP1Q86V88 176 aa3.11□□□□□ -1.91
SNX13-211ENST00000496855 MKXQ8IYA7 352 aa3.11□□□□□ -1.91
SNX13-211ENST00000496855 ZNF567Q8N184 647 aa3.11□□□□□ -1.91
SNX13-211ENST00000496855 C15orf56Q8N910 161 aa3.11□□□□□ -1.91
SNX13-211ENST00000496855 TMEM75Q8N9X5 138 aa3.11□□□□□ -1.91
SNX13-211ENST00000496855 LINC01555Q8NAE3 123 aa3.11□□□□□ -1.91
SNX13-211ENST00000496855 ZNF555Q8NEP9 628 aa3.11□□□□□ -1.91
SNX13-211ENST00000496855 OR4M2Q8NGB6 313 aa3.11□□□□□ -1.91
SNX13-211ENST00000496855 OR1L1Q8NH94 360 aa3.11□□□□□ -1.91
SNX13-211ENST00000496855 MFSD8Q8NHS3 518 aa3.11□□□□□ -1.91
SNX13-211ENST00000496855 ABCG5Q9H222 651 aa3.11□□□□□ -1.91
SNX13-211ENST00000496855 C12orf10Q9HB07 376 aa3.11□□□□□ -1.91
SNX13-211ENST00000496855 C8orf17Q9NRJ1 99 aa3.11□□□□□ -1.91
SNX13-211ENST00000496855 NDUFAF1Q9Y375 327 aa3.11□□□□□ -1.91
SNX13-211ENST00000496855 IGKV1-6A0A0C4DH72 117 aa3.1□□□□□ -1.91
SNX13-211ENST00000496855 OR4C46A6NHA9 309 aa3.1□□□□□ -1.91
SNX13-211ENST00000496855 EEF1E1-BLOC1S5C9J1V9 151 aa3.1□□□□□ -1.91
SNX13-211ENST00000496855 LGALS9O00182 355 aa3.1□□□□□ -1.91
SNX13-211ENST00000496855 EEF1E1O43324 174 aaKnown RBP3.1□□□□□ -1.91
SNX13-211ENST00000496855 ZNF207O43670 478 aaKnown RBP3.1□□□□□ -1.91
SNX13-211ENST00000496855 STK16O75716 305 aa3.1□□□□□ -1.91
SNX13-211ENST00000496855 YIF1AO95070 293 aa3.1□□□□□ -1.91
SNX13-211ENST00000496855 NBEAP1P0C6P0 100 aa3.1□□□□□ -1.91
SNX13-211ENST00000496855 PSG2P11465 335 aa3.1□□□□□ -1.91
SNX13-211ENST00000496855 CCL1P22362 96 aa3.1□□□□□ -1.91
SNX13-211ENST00000496855 RPL5P46777 297 aaKnown RBP3.1□□□□□ -1.91
SNX13-211ENST00000496855 ERFP50548 548 aa3.1□□□□□ -1.91
SNX13-211ENST00000496855 CTBP2P56545 445 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms