RNA–Protein interactions for RNA: ENST00000496468.1

TSSC4-210, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TSSC4, Length 912 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-210ENST00000496468 ZNF230Q9UIE0 474 aaPredicted RBP15.03■□□□□ -0
TSSC4-210ENST00000496468 RABL2BQ9UNT1 228 aa15.03■□□□□ -0
TSSC4-210ENST00000496468 NPIPB11E5RHQ5 1161 aa15.02■□□□□ -0
TSSC4-210ENST00000496468 MMP23AO75900 390 aa15.02■□□□□ -0
TSSC4-210ENST00000496468 AVPP01185 164 aa15.02■□□□□ -0
TSSC4-210ENST00000496468 COX7A1P24310 79 aa15.02■□□□□ -0
TSSC4-210ENST00000496468 FPR2P25090 351 aa15.02■□□□□ -0
TSSC4-210ENST00000496468 NFYBP25208 207 aa15.02■□□□□ -0
TSSC4-210ENST00000496468 GDNFP39905 211 aa15.02■□□□□ -0
TSSC4-210ENST00000496468 PRB3Q04118 309 aaPredicted RBP15.02■□□□□ -0
TSSC4-210ENST00000496468 KLRD1Q13241 179 aa15.02■□□□□ -0
TSSC4-210ENST00000496468 FAM120AOSQ5T036 256 aa15.02■□□□□ -0
TSSC4-210ENST00000496468 PYHIN1Q6K0P9 492 aa15.02■□□□□ -0
TSSC4-210ENST00000496468 FAM131AQ6UXB0 335 aa15.02■□□□□ -0
TSSC4-210ENST00000496468 C11orf42Q8N5U0 333 aa15.02■□□□□ -0
TSSC4-210ENST00000496468 OR10A7Q8NGE5 316 aa15.02■□□□□ -0
TSSC4-210ENST00000496468 LHX4Q969G2 390 aa15.02■□□□□ -0
TSSC4-210ENST00000496468 SUCNR1Q9BXA5 334 aa15.02■□□□□ -0
TSSC4-210ENST00000496468 SCPEP1Q9HB40 452 aa15.02■□□□□ -0
TSSC4-210ENST00000496468 KIAA2026Q5HYC2 2103 aa15.02□□□□□ -0.01
TSSC4-210ENST00000496468 FAM172BPA6NC97 362 aa15.01□□□□□ -0.01
TSSC4-210ENST00000496468 MEIS3P1A6NDR6 274 aa15.01□□□□□ -0.01
TSSC4-210ENST00000496468 FABP12A6NFH5 140 aa15.01□□□□□ -0.01
TSSC4-210ENST00000496468 TRDCB7Z8K6 153 aa15.01□□□□□ -0.01
TSSC4-210ENST00000496468 F2RL2O00254 374 aa15.01□□□□□ -0.01
TSSC4-210ENST00000496468 SDCBPO00560 298 aaPredicted RBP15.01□□□□□ -0.01
TSSC4-210ENST00000496468 SRSF7Q16629 238 aaKnown RBP eCLIP15.01□□□□□ -0.01
TSSC4-210ENST00000496468 RNASE12Q5GAN4 147 aaKnown RBP15.01□□□□□ -0.01
TSSC4-210ENST00000496468 SPANXN2Q5MJ10 180 aa15.01□□□□□ -0.01
TSSC4-210ENST00000496468 OR52W1Q6IF63 320 aa15.01□□□□□ -0.01
TSSC4-210ENST00000496468 C1orf229Q6ZS94 237 aaPredicted RBP15.01□□□□□ -0.01
TSSC4-210ENST00000496468 IL17RELQ6ZVW7 336 aa15.01□□□□□ -0.01
TSSC4-210ENST00000496468 Q71RC1 249 aaPredicted RBP15.01□□□□□ -0.01
TSSC4-210ENST00000496468 OR13D1Q8NGV5 346 aa15.01□□□□□ -0.01
TSSC4-210ENST00000496468 IL1F10Q8WWZ1 152 aa15.01□□□□□ -0.01
TSSC4-210ENST00000496468 ST6GALNAC5Q9BVH7 336 aa15.01□□□□□ -0.01
TSSC4-210ENST00000496468 TMEM133Q9H2Q1 129 aa15.01□□□□□ -0.01
TSSC4-210ENST00000496468 CSPG4Q6UVK1 2322 aa15.01□□□□□ -0.01
TSSC4-210ENST00000496468 ANK3Q12955 4377 aaKnown RBP15.01□□□□□ -0.01
TSSC4-210ENST00000496468 MEIOCA2RUB1 952 aa15□□□□□ -0.01
TSSC4-210ENST00000496468 SULT1C2O00338 296 aa15□□□□□ -0.01
TSSC4-210ENST00000496468 FABP7O15540 132 aa15□□□□□ -0.01
TSSC4-210ENST00000496468 MRPS10P82664 201 aaKnown RBP15□□□□□ -0.01
TSSC4-210ENST00000496468 GPR157Q5UAW9 335 aa15□□□□□ -0.01
TSSC4-210ENST00000496468 Q6ZS49 121 aa15□□□□□ -0.01
TSSC4-210ENST00000496468 CCDC190Q86UF4 302 aa15□□□□□ -0.01
TSSC4-210ENST00000496468 PDZD9Q8IXQ8 264 aa15□□□□□ -0.01
TSSC4-210ENST00000496468 GVQW1Q8N7I0 195 aa15□□□□□ -0.01
TSSC4-210ENST00000496468 OR4A4PQ8NGN8 299 aa15□□□□□ -0.01
TSSC4-210ENST00000496468 NANPQ8TBE9 248 aa15□□□□□ -0.01
TSSC4-210ENST00000496468 GPX8Q8TED1 209 aa15□□□□□ -0.01
TSSC4-210ENST00000496468 TNFRSF14Q92956 283 aa15□□□□□ -0.01
TSSC4-210ENST00000496468 GALMQ96C23 342 aa15□□□□□ -0.01
TSSC4-210ENST00000496468 ABHD1Q96SE0 405 aa15□□□□□ -0.01
TSSC4-210ENST00000496468 OCSTAMPQ9BR26 566 aa15□□□□□ -0.01
TSSC4-210ENST00000496468 HEXA-AS1Q9H8Q6 139 aa15□□□□□ -0.01
TSSC4-210ENST00000496468 GNG12Q9UBI6 72 aa15□□□□□ -0.01
TSSC4-210ENST00000496468 JPT1Q9UK76 154 aa15□□□□□ -0.01
TSSC4-210ENST00000496468 V9GYH0 126 aa15□□□□□ -0.01
TSSC4-210ENST00000496468 IGHV3OR16-10A0A075B7F0 116 aa14.99□□□□□ -0.01
TSSC4-210ENST00000496468 IGHV2-26A0A0B4J1V2 119 aa14.99□□□□□ -0.01
TSSC4-210ENST00000496468 IGHV3-43A0A0B4J1X8 118 aa14.99□□□□□ -0.01
TSSC4-210ENST00000496468 RNASEK-C17orf49H0YIS7 233 aa14.99□□□□□ -0.01
TSSC4-210ENST00000496468 IGHV3-43DP0DP04 118 aa14.99□□□□□ -0.01
TSSC4-210ENST00000496468 IGHV4-38-2P0DP08 117 aa14.99□□□□□ -0.01
TSSC4-210ENST00000496468 SRP14P37108 136 aaKnown RBP14.99□□□□□ -0.01
TSSC4-210ENST00000496468 STEAP3Q658P3 488 aa14.99□□□□□ -0.01
TSSC4-210ENST00000496468 HOGA1Q86XE5 327 aa14.99□□□□□ -0.01
TSSC4-210ENST00000496468 PNKDQ8N490 385 aa14.99□□□□□ -0.01
TSSC4-210ENST00000496468 OR52M1Q8NGK5 317 aa14.99□□□□□ -0.01
TSSC4-210ENST00000496468 CLEC7AQ9BXN2 247 aa14.99□□□□□ -0.01
TSSC4-210ENST00000496468 GFOD1Q9NXC2 390 aa14.99□□□□□ -0.01
TSSC4-210ENST00000496468 ANAPC10Q9UM13 185 aa14.99□□□□□ -0.01
TSSC4-210ENST00000496468 TLN2Q9Y4G6 2542 aa14.99□□□□□ -0.01
TSSC4-210ENST00000496468 GABARAPH6UMI1 98 aa14.98□□□□□ -0.01
TSSC4-210ENST00000496468 CTDSPLO15194 276 aa14.98□□□□□ -0.01
TSSC4-210ENST00000496468 FSHBP01225 129 aa14.98□□□□□ -0.01
TSSC4-210ENST00000496468 FCER2P06734 321 aa14.98□□□□□ -0.01
TSSC4-210ENST00000496468 SCTP09683 121 aa14.98□□□□□ -0.01
TSSC4-210ENST00000496468 RCVRNP35243 200 aa14.98□□□□□ -0.01
TSSC4-210ENST00000496468 ARPC4P59998 168 aa14.98□□□□□ -0.01
TSSC4-210ENST00000496468 HTD2P86397 168 aa14.98□□□□□ -0.01
TSSC4-210ENST00000496468 GNMTQ14749 295 aa14.98□□□□□ -0.01
TSSC4-210ENST00000496468 KLF17Q5JT82 389 aaPredicted RBP14.98□□□□□ -0.01
TSSC4-210ENST00000496468 C5orf24Q7Z6I8 188 aa14.98□□□□□ -0.01
TSSC4-210ENST00000496468 BEST4Q8NFU0 473 aa14.98□□□□□ -0.01
TSSC4-210ENST00000496468 OR10V1Q8NGI7 309 aa14.98□□□□□ -0.01
TSSC4-210ENST00000496468 OR52I2Q8NH67 350 aa14.98□□□□□ -0.01
TSSC4-210ENST00000496468 SMIM4Q8WVI0 70 aa14.98□□□□□ -0.01
TSSC4-210ENST00000496468 CABLES2Q9BTV7 478 aa14.98□□□□□ -0.01
TSSC4-210ENST00000496468 OR2S2Q9NQN1 319 aa14.98□□□□□ -0.01
TSSC4-210ENST00000496468 SLC23A1Q9UHI7 598 aa14.98□□□□□ -0.01
TSSC4-210ENST00000496468 CDC42EP3Q9UKI2 254 aa14.98□□□□□ -0.01
TSSC4-210ENST00000496468 IGKV1D-8A0A087WSZ0 117 aa14.97□□□□□ -0.01
TSSC4-210ENST00000496468 A0A087X0M5 115 aa14.97□□□□□ -0.01
TSSC4-210ENST00000496468 IGHV1-69DA0A0B4J2H0 117 aa14.97□□□□□ -0.01
TSSC4-210ENST00000496468 CENPVL3A0A0U1RRI6 287 aa14.97□□□□□ -0.01
TSSC4-210ENST00000496468 A0A1B0GX30 115 aa14.97□□□□□ -0.01
TSSC4-210ENST00000496468 INAFM1C9JVW0 142 aa14.97□□□□□ -0.01
TSSC4-210ENST00000496468 HSPA12AO43301 675 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms