RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 CLDND2Q8NHS1 167 aa11.08□□□□□ -0.64
PTPN7-217ENST00000495688 ATP5SQ99766 215 aa11.08□□□□□ -0.64
PTPN7-217ENST00000495688 VSIRQ9H7M9 311 aa11.08□□□□□ -0.64
PTPN7-217ENST00000495688 OR2W1Q9Y3N9 320 aa11.08□□□□□ -0.64
PTPN7-217ENST00000495688 KIAA1324LA8MWY0 1029 aaPredicted RBP11.08□□□□□ -0.64
PTPN7-217ENST00000495688 PPIHO43447 177 aaKnown RBP11.08□□□□□ -0.64
PTPN7-217ENST00000495688 IAPPP10997 89 aa11.08□□□□□ -0.64
PTPN7-217ENST00000495688 RPL23AP62750 156 aaKnown RBP11.08□□□□□ -0.64
PTPN7-217ENST00000495688 TCEAL6Q6IPX3 200 aa11.08□□□□□ -0.64
PTPN7-217ENST00000495688 SAXO1Q8IYX7 474 aa11.08□□□□□ -0.64
PTPN7-217ENST00000495688 OR10J5Q8NHC4 309 aa11.08□□□□□ -0.64
PTPN7-217ENST00000495688 GNPNAT1Q96EK6 184 aaPredicted RBP11.08□□□□□ -0.64
PTPN7-217ENST00000495688 POM121L2Q96KW2 1035 aa11.08□□□□□ -0.64
PTPN7-217ENST00000495688 BOKQ9UMX3 212 aaPredicted RBP11.08□□□□□ -0.64
PTPN7-217ENST00000495688 LOXL2Q9Y4K0 774 aa11.08□□□□□ -0.64
PTPN7-217ENST00000495688 USF3Q68DE3 2245 aa11.08□□□□□ -0.64
PTPN7-217ENST00000495688 PRR14LQ5THK1 2151 aa11.07□□□□□ -0.64
PTPN7-217ENST00000495688 TGIF2-C20orf24A0A0A6YYL0 155 aa11.07□□□□□ -0.64
PTPN7-217ENST00000495688 TRAV20A0A0B4J274 112 aa11.07□□□□□ -0.64
PTPN7-217ENST00000495688 YKT6O15498 198 aa11.07□□□□□ -0.64
PTPN7-217ENST00000495688 IGKV1-39P01597 117 aa11.07□□□□□ -0.64
PTPN7-217ENST00000495688 IGKV1D-39P04432 117 aa11.07□□□□□ -0.64
PTPN7-217ENST00000495688 SERPINE2P07093 398 aa11.07□□□□□ -0.64
PTPN7-217ENST00000495688 CA6P23280 308 aa11.07□□□□□ -0.64
PTPN7-217ENST00000495688 WNT5AP41221 380 aa11.07□□□□□ -0.64
PTPN7-217ENST00000495688 BAXQ07812 192 aa11.07□□□□□ -0.64
PTPN7-217ENST00000495688 KIAA0141Q14154 515 aaPredicted RBP11.07□□□□□ -0.64
PTPN7-217ENST00000495688 SSPNQ14714 243 aa11.07□□□□□ -0.64
PTPN7-217ENST00000495688 ELOBQ15370 118 aa11.07□□□□□ -0.64
PTPN7-217ENST00000495688 SRSF7Q16629 238 aaKnown RBP eCLIP11.07□□□□□ -0.64
PTPN7-217ENST00000495688 NRN1LQ496H8 165 aa11.07□□□□□ -0.64
PTPN7-217ENST00000495688 OR2T2Q6IF00 324 aa11.07□□□□□ -0.64
PTPN7-217ENST00000495688 SLC25A24Q6NUK1 477 aa11.07□□□□□ -0.64
PTPN7-217ENST00000495688 C6orf15Q6UXA7 325 aaPredicted RBP11.07□□□□□ -0.64
PTPN7-217ENST00000495688 NUFIP2Q7Z417 695 aaKnown RBP11.07□□□□□ -0.64
PTPN7-217ENST00000495688 OR5P3Q8WZ94 311 aa11.07□□□□□ -0.64
PTPN7-217ENST00000495688 HIST1H2AAQ96QV6 131 aa11.07□□□□□ -0.64
PTPN7-217ENST00000495688 SMDT1Q9H4I9 107 aa11.07□□□□□ -0.64
PTPN7-217ENST00000495688 GNG13Q9P2W3 67 aa11.07□□□□□ -0.64
PTPN7-217ENST00000495688 MRPS18CQ9Y3D5 142 aaKnown RBP11.07□□□□□ -0.64
PTPN7-217ENST00000495688 ARHGAP21Q5T5U3 1957 aa11.07□□□□□ -0.64
PTPN7-217ENST00000495688 LAMA5O15230 3695 aa11.07□□□□□ -0.64
PTPN7-217ENST00000495688 DOCK11Q5JSL3 2073 aa11.07□□□□□ -0.64
PTPN7-217ENST00000495688 IFNA17P01571 189 aa11.07□□□□□ -0.64
PTPN7-217ENST00000495688 IGLV2-14P01704 120 aa11.07□□□□□ -0.64
PTPN7-217ENST00000495688 IGHEP01854 428 aa11.07□□□□□ -0.64
PTPN7-217ENST00000495688 RD3LP0DJH9 198 aa11.07□□□□□ -0.64
PTPN7-217ENST00000495688 MAS1LP35410 378 aa11.07□□□□□ -0.64
PTPN7-217ENST00000495688 EIF2S3P41091 472 aaKnown RBP11.07□□□□□ -0.64
PTPN7-217ENST00000495688 TAS2R30P59541 319 aa11.07□□□□□ -0.64
PTPN7-217ENST00000495688 ARL16Q0P5N6 197 aa11.07□□□□□ -0.64
PTPN7-217ENST00000495688 HNF4GQ14541 408 aa11.07□□□□□ -0.64
PTPN7-217ENST00000495688 OR5A2Q8NGI9 324 aa11.07□□□□□ -0.64
PTPN7-217ENST00000495688 RNASE11Q8TAA1 199 aaKnown RBP11.07□□□□□ -0.64
PTPN7-217ENST00000495688 CACNG5Q9UF02 275 aa11.07□□□□□ -0.64
PTPN7-217ENST00000495688 PPP1R3CQ9UQK1 317 aa11.07□□□□□ -0.64
PTPN7-217ENST00000495688 IFITM10A6NMD0 228 aa11.06□□□□□ -0.64
PTPN7-217ENST00000495688 SS18L1O75177 396 aaPredicted RBP11.06□□□□□ -0.64
PTPN7-217ENST00000495688 METTL15P1P0C7V9 234 aa11.06□□□□□ -0.64
PTPN7-217ENST00000495688 TDGF1P13385 188 aa11.06□□□□□ -0.64
PTPN7-217ENST00000495688 FGF8P55075 233 aaPredicted RBP11.06□□□□□ -0.64
PTPN7-217ENST00000495688 ZNF506Q5JVG8 444 aa11.06□□□□□ -0.64
PTPN7-217ENST00000495688 LINC00696Q6ZRV3 163 aa11.06□□□□□ -0.64
PTPN7-217ENST00000495688 SSX7Q7RTT5 188 aa11.06□□□□□ -0.64
PTPN7-217ENST00000495688 STX12Q86Y82 276 aa11.06□□□□□ -0.64
PTPN7-217ENST00000495688 EDARADDQ8WWZ3 215 aa11.06□□□□□ -0.64
PTPN7-217ENST00000495688 ABHD14BQ96IU4 210 aa11.06□□□□□ -0.64
PTPN7-217ENST00000495688 LINC00470Q9BZP3 86 aa11.06□□□□□ -0.64
PTPN7-217ENST00000495688 C12orf49Q9H741 205 aa11.06□□□□□ -0.64
PTPN7-217ENST00000495688 RPRMQ9NS64 109 aa11.06□□□□□ -0.64
PTPN7-217ENST00000495688 DLL3Q9NYJ7 618 aa11.06□□□□□ -0.64
PTPN7-217ENST00000495688 TRBV23-1A0A0A0MS06 115 aa11.06□□□□□ -0.64
PTPN7-217ENST00000495688 DUXBA0A1W2PPF3 345 aa11.06□□□□□ -0.64
PTPN7-217ENST00000495688 BTBD17A6NE02 478 aa11.06□□□□□ -0.64
PTPN7-217ENST00000495688 ZFP92A6NM28 416 aa11.06□□□□□ -0.64
PTPN7-217ENST00000495688 CER1O95813 267 aa11.06□□□□□ -0.64
PTPN7-217ENST00000495688 CTXN2P0C2S0 81 aa11.06□□□□□ -0.64
PTPN7-217ENST00000495688 ZNF16P17020 682 aaPredicted RBP11.06□□□□□ -0.64
PTPN7-217ENST00000495688 TLE4Q04727 773 aa11.06□□□□□ -0.64
PTPN7-217ENST00000495688 IL24Q13007 206 aa11.06□□□□□ -0.64
PTPN7-217ENST00000495688 FAM180AQ6UWF9 173 aa11.06□□□□□ -0.64
PTPN7-217ENST00000495688 LCN15Q6UWW0 184 aa11.06□□□□□ -0.64
PTPN7-217ENST00000495688 FAM58AQ8N1B3 248 aa11.06□□□□□ -0.64
PTPN7-217ENST00000495688 OR8G5Q8NG78 346 aa11.06□□□□□ -0.64
PTPN7-217ENST00000495688 OR1K1Q8NGR3 316 aa11.06□□□□□ -0.64
PTPN7-217ENST00000495688 TCTEX1D2Q8WW35 142 aa11.06□□□□□ -0.64
PTPN7-217ENST00000495688 APH1AQ96BI3 265 aa11.06□□□□□ -0.64
PTPN7-217ENST00000495688 POM121Q96HA1 1249 aa11.06□□□□□ -0.64
PTPN7-217ENST00000495688 BCL2L14Q9BZR8 327 aa11.06□□□□□ -0.64
PTPN7-217ENST00000495688 ZNF665Q9H7R5 613 aa11.06□□□□□ -0.64
PTPN7-217ENST00000495688 PRSS50Q9UI38 385 aa11.06□□□□□ -0.64
PTPN7-217ENST00000495688 B4E171 279 aa11.05□□□□□ -0.64
PTPN7-217ENST00000495688 HSPB1P04792 205 aaKnown RBP11.05□□□□□ -0.64
PTPN7-217ENST00000495688 CEACAM1P13688 526 aa11.05□□□□□ -0.64
PTPN7-217ENST00000495688 TSPAN7P41732 249 aa11.05□□□□□ -0.64
PTPN7-217ENST00000495688 ZNF674Q2M3X9 581 aa11.05□□□□□ -0.64
PTPN7-217ENST00000495688 C1QL4Q86Z23 238 aa11.05□□□□□ -0.64
PTPN7-217ENST00000495688 H1FOOQ8IZA3 346 aaPredicted RBP11.05□□□□□ -0.64
PTPN7-217ENST00000495688 FAM173AQ9BQD7 235 aa11.05□□□□□ -0.64
PTPN7-217ENST00000495688 NIPSNAP3BQ9BS92 247 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms